RNA–Protein interactions for RNA: ENST00000505017.1

DEPDC1B-203, Transcript of DEP domain containing 1B, humanhuman

TSL 3

Gene DEPDC1B, Length 854 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-203ENST00000505017 CLTCL1P53675 1640 aa6.65□□□□□ -1.35
DEPDC1B-203ENST00000505017 GAS7O60861 476 aa6.64□□□□□ -1.35
DEPDC1B-203ENST00000505017 FSBPO95073 299 aa6.64□□□□□ -1.35
DEPDC1B-203ENST00000505017 HK1P19367 917 aa6.64□□□□□ -1.35
DEPDC1B-203ENST00000505017 PROZP22891 400 aa6.64□□□□□ -1.35
DEPDC1B-203ENST00000505017 HOMER1Q86YM7 354 aa6.64□□□□□ -1.35
DEPDC1B-203ENST00000505017 VRK3Q8IV63 474 aa6.64□□□□□ -1.35
DEPDC1B-203ENST00000505017 ZNF276Q8N554 614 aa6.64□□□□□ -1.35
DEPDC1B-203ENST00000505017 SLC25A43Q8WUT9 341 aaPredicted RBP6.64□□□□□ -1.35
DEPDC1B-203ENST00000505017 ARL8AQ96BM9 186 aa6.64□□□□□ -1.35
DEPDC1B-203ENST00000505017 HIST1H2AHQ96KK5 128 aa6.64□□□□□ -1.35
DEPDC1B-203ENST00000505017 HIST1H2AJQ99878 128 aa6.64□□□□□ -1.35
DEPDC1B-203ENST00000505017 TTPALQ9BTX7 342 aa6.64□□□□□ -1.35
DEPDC1B-203ENST00000505017 ZNF768Q9H5H4 540 aaKnown RBP6.64□□□□□ -1.35
DEPDC1B-203ENST00000505017 WASHC2CQ9Y4E1 1318 aa6.64□□□□□ -1.35
DEPDC1B-203ENST00000505017 NOS1P29475 1434 aa6.64□□□□□ -1.35
DEPDC1B-203ENST00000505017 NPATQ14207 1427 aa6.64□□□□□ -1.35
DEPDC1B-203ENST00000505017 LAMC1P11047 1609 aa6.64□□□□□ -1.35
DEPDC1B-203ENST00000505017 A0A1W2PR48 441 aa6.63□□□□□ -1.35
DEPDC1B-203ENST00000505017 MFAP3LO75121 409 aa6.63□□□□□ -1.35
DEPDC1B-203ENST00000505017 TGM1P22735 817 aa6.63□□□□□ -1.35
DEPDC1B-203ENST00000505017 ADCYAP1R1P41586 468 aa6.63□□□□□ -1.35
DEPDC1B-203ENST00000505017 PHC1P78364 1004 aa6.63□□□□□ -1.35
DEPDC1B-203ENST00000505017 TERF2Q15554 542 aa6.63□□□□□ -1.35
DEPDC1B-203ENST00000505017 MAN2A1Q16706 1144 aa6.63□□□□□ -1.35
DEPDC1B-203ENST00000505017 DALRD3Q5D0E6 543 aaKnown RBP6.63□□□□□ -1.35
DEPDC1B-203ENST00000505017 GPR158Q5T848 1215 aa6.63□□□□□ -1.35
DEPDC1B-203ENST00000505017 GGT6Q6P531 493 aa6.63□□□□□ -1.35
DEPDC1B-203ENST00000505017 ZNF662Q6ZS27 426 aa6.63□□□□□ -1.35
DEPDC1B-203ENST00000505017 APBB1IPQ7Z5R6 666 aaPredicted RBP6.63□□□□□ -1.35
DEPDC1B-203ENST00000505017 PRAG1Q86YV5 1406 aa6.63□□□□□ -1.35
DEPDC1B-203ENST00000505017 CDYL2Q8N8U2 506 aa6.63□□□□□ -1.35
DEPDC1B-203ENST00000505017 OR52N2Q8NGI0 321 aa6.63□□□□□ -1.35
DEPDC1B-203ENST00000505017 LENG9Q96B70 501 aa6.63□□□□□ -1.35
DEPDC1B-203ENST00000505017 GPR101Q96P66 508 aaPredicted RBP6.63□□□□□ -1.35
DEPDC1B-203ENST00000505017 USP18Q9UMW8 372 aa6.63□□□□□ -1.35
DEPDC1B-203ENST00000505017 PPP2R3BQ9Y5P8 575 aa6.63□□□□□ -1.35
DEPDC1B-203ENST00000505017 HS3ST4Q9Y661 456 aa6.63□□□□□ -1.35
DEPDC1B-203ENST00000505017 POLR1AO95602 1720 aaPredicted RBP6.62□□□□□ -1.35
DEPDC1B-203ENST00000505017 KIAA1210Q9ULL0 1709 aa6.62□□□□□ -1.35
DEPDC1B-203ENST00000505017 PIK3C2BO00750 1634 aa6.62□□□□□ -1.35
DEPDC1B-203ENST00000505017 TRPM1Q7Z4N2 1603 aa6.62□□□□□ -1.35
DEPDC1B-203ENST00000505017 GPRASP1Q5JY77 1395 aa6.62□□□□□ -1.35
DEPDC1B-203ENST00000505017 AHRRA9YTQ3 701 aa6.62□□□□□ -1.35
DEPDC1B-203ENST00000505017 NANOS3P60323 173 aaKnown RBP6.62□□□□□ -1.35
DEPDC1B-203ENST00000505017 TRIM25Q14258 630 aaKnown RBP6.62□□□□□ -1.35
DEPDC1B-203ENST00000505017 NBPF8Q3BBV2 869 aa6.62□□□□□ -1.35
DEPDC1B-203ENST00000505017 DCAF17Q5H9S7 520 aaPredicted RBP6.62□□□□□ -1.35
DEPDC1B-203ENST00000505017 MBNL2Q5VZF2 373 aaKnown RBP6.62□□□□□ -1.35
DEPDC1B-203ENST00000505017 ESPNLQ6ZVH7 1005 aa6.62□□□□□ -1.35
DEPDC1B-203ENST00000505017 JAZF1Q86VZ6 243 aa6.62□□□□□ -1.35
DEPDC1B-203ENST00000505017 NIM1KQ8IY84 436 aa6.62□□□□□ -1.35
DEPDC1B-203ENST00000505017 ZNF610Q8N9Z0 462 aa6.62□□□□□ -1.35
DEPDC1B-203ENST00000505017 PRRX2Q99811 253 aa6.62□□□□□ -1.35
DEPDC1B-203ENST00000505017 USP36Q9P275 1121 aaKnown RBP6.62□□□□□ -1.35
DEPDC1B-203ENST00000505017 EVLQ9UI08 416 aaPredicted RBP6.62□□□□□ -1.35
DEPDC1B-203ENST00000505017 MRPL42Q9Y6G3 142 aaKnown RBP6.62□□□□□ -1.35
DEPDC1B-203ENST00000505017 ADGRB3O60242 1522 aa6.61□□□□□ -1.35
DEPDC1B-203ENST00000505017 MYOM2P54296 1465 aa6.61□□□□□ -1.35
DEPDC1B-203ENST00000505017 RPGRIP1LQ68CZ1 1315 aa6.61□□□□□ -1.35
DEPDC1B-203ENST00000505017 GOLGA6L6A8MZA4 724 aa6.61□□□□□ -1.35
DEPDC1B-203ENST00000505017 IPO13O94829 963 aaKnown RBP6.61□□□□□ -1.35
DEPDC1B-203ENST00000505017 KPNA1P52294 538 aaPredicted RBP6.61□□□□□ -1.35
DEPDC1B-203ENST00000505017 FAM189BP81408 668 aa6.61□□□□□ -1.35
DEPDC1B-203ENST00000505017 MRPL49Q13405 166 aaKnown RBP6.61□□□□□ -1.35
DEPDC1B-203ENST00000505017 LAIR1Q6GTX8 287 aa6.61□□□□□ -1.35
DEPDC1B-203ENST00000505017 TAS1R1Q7RTX1 841 aa6.61□□□□□ -1.35
DEPDC1B-203ENST00000505017 LILRA3Q8N6C8 439 aaPredicted RBP6.61□□□□□ -1.35
DEPDC1B-203ENST00000505017 GPR150Q8NGU9 434 aa6.61□□□□□ -1.35
DEPDC1B-203ENST00000505017 GAB3Q8WWW8 586 aa6.61□□□□□ -1.35
DEPDC1B-203ENST00000505017 HAS1Q92839 578 aa6.61□□□□□ -1.35
DEPDC1B-203ENST00000505017 SLC52A1Q9NWF4 448 aa6.61□□□□□ -1.35
DEPDC1B-203ENST00000505017 SORCS3Q9UPU3 1222 aa6.61□□□□□ -1.35
DEPDC1B-203ENST00000505017 IFT172Q9UG01 1749 aa6.61□□□□□ -1.35
DEPDC1B-203ENST00000505017 PREX1Q8TCU6 1659 aa6.61□□□□□ -1.35
DEPDC1B-203ENST00000505017 ARID4BQ4LE39 1312 aaPredicted RBP6.6□□□□□ -1.35
DEPDC1B-203ENST00000505017 RAMP2O60895 175 aa6.6□□□□□ -1.35
DEPDC1B-203ENST00000505017 GNAT2P19087 354 aa6.6□□□□□ -1.35
DEPDC1B-203ENST00000505017 MANFP55145 182 aaKnown RBP6.6□□□□□ -1.35
DEPDC1B-203ENST00000505017 GPRIN1Q7Z2K8 1008 aa6.6□□□□□ -1.35
DEPDC1B-203ENST00000505017 ZNF575Q86XF7 245 aa6.6□□□□□ -1.35
DEPDC1B-203ENST00000505017 XYLT1Q86Y38 959 aa6.6□□□□□ -1.35
DEPDC1B-203ENST00000505017 SYT12Q8IV01 421 aa6.6□□□□□ -1.35
DEPDC1B-203ENST00000505017 APPBP2Q92624 585 aa6.6□□□□□ -1.35
DEPDC1B-203ENST00000505017 ANO3Q9BYT9 981 aa6.6□□□□□ -1.35
DEPDC1B-203ENST00000505017 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.6□□□□□ -1.35
DEPDC1B-203ENST00000505017 NUMBLQ9Y6R0 609 aa6.6□□□□□ -1.35
DEPDC1B-203ENST00000505017 MROH2AA6NES4 1674 aa6.6□□□□□ -1.35
DEPDC1B-203ENST00000505017 MADDQ8WXG6 1647 aa6.6□□□□□ -1.35
DEPDC1B-203ENST00000505017 CFAP65Q6ZU64 1925 aaKnown RBP6.6□□□□□ -1.35
DEPDC1B-203ENST00000505017 SIGLEC1Q9BZZ2 1709 aa6.59□□□□□ -1.35
DEPDC1B-203ENST00000505017 USP47Q96K76 1375 aa6.59□□□□□ -1.35
DEPDC1B-203ENST00000505017 COL4A3Q01955 1670 aa6.59□□□□□ -1.35
DEPDC1B-203ENST00000505017 A0A087X0B3 334 aa6.59□□□□□ -1.35
DEPDC1B-203ENST00000505017 GRID2IPA4D2P6 1211 aa6.59□□□□□ -1.35
DEPDC1B-203ENST00000505017 GSG1L2A8MUP6 293 aa6.59□□□□□ -1.35
DEPDC1B-203ENST00000505017 TMEM127O75204 238 aa6.59□□□□□ -1.35
DEPDC1B-203ENST00000505017 CLEC2LP0C7M8 214 aa6.59□□□□□ -1.35
DEPDC1B-203ENST00000505017 HSPA5P11021 654 aaKnown RBP6.59□□□□□ -1.35
DEPDC1B-203ENST00000505017 PTGS2P35354 604 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms