RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 LRRIQ4A6NIV6 560 aa10.56□□□□□ -0.72
COL1A1-210ENST00000504289 GOLGA8JA6NMD2 632 aa10.56□□□□□ -0.72
COL1A1-210ENST00000504289 ZNF185O15231 689 aa10.56□□□□□ -0.72
COL1A1-210ENST00000504289 MAGEB2O15479 319 aa10.56□□□□□ -0.72
COL1A1-210ENST00000504289 TOM1L1O75674 476 aa10.56□□□□□ -0.72
COL1A1-210ENST00000504289 C4BPAP04003 597 aaKnown RBP10.56□□□□□ -0.72
COL1A1-210ENST00000504289 MYBL1P10243 752 aa10.56□□□□□ -0.72
COL1A1-210ENST00000504289 HSPA6P17066 643 aa10.56□□□□□ -0.72
COL1A1-210ENST00000504289 PDE6CP51160 858 aa10.56□□□□□ -0.72
COL1A1-210ENST00000504289 CDR2Q01850 454 aa10.56□□□□□ -0.72
COL1A1-210ENST00000504289 MAP2K1Q02750 393 aaPredicted RBP10.56□□□□□ -0.72
COL1A1-210ENST00000504289 FSTL1Q12841 308 aa10.56□□□□□ -0.72
COL1A1-210ENST00000504289 CAPSQ13938 189 aa10.56□□□□□ -0.72
COL1A1-210ENST00000504289 KYAT1Q16773 422 aa10.56□□□□□ -0.72
COL1A1-210ENST00000504289 EMBQ6PCB8 327 aa10.56□□□□□ -0.72
COL1A1-210ENST00000504289 TRIM72Q6ZMU5 477 aa10.56□□□□□ -0.72
COL1A1-210ENST00000504289 NT5DC3Q86UY8 548 aa10.56□□□□□ -0.72
COL1A1-210ENST00000504289 IFNLR1Q8IU57 520 aaPredicted RBP10.56□□□□□ -0.72
COL1A1-210ENST00000504289 IFT20Q8IY31 132 aa10.56□□□□□ -0.72
COL1A1-210ENST00000504289 PPM1KQ8N3J5 372 aa10.56□□□□□ -0.72
COL1A1-210ENST00000504289 USP38Q8NB14 1042 aa10.56□□□□□ -0.72
COL1A1-210ENST00000504289 SLC35G2Q8TBE7 412 aa10.56□□□□□ -0.72
COL1A1-210ENST00000504289 EPS8L1Q8TE68 723 aa10.56□□□□□ -0.72
COL1A1-210ENST00000504289 ZNF526Q8TF50 670 aaPredicted RBP10.56□□□□□ -0.72
COL1A1-210ENST00000504289 GLG1Q92896 1179 aa10.56□□□□□ -0.72
COL1A1-210ENST00000504289 TMEM143Q96AN5 459 aa10.56□□□□□ -0.72
COL1A1-210ENST00000504289 CCDC127Q96BQ5 260 aa10.56□□□□□ -0.72
COL1A1-210ENST00000504289 KREMEN1Q96MU8 473 aa10.56□□□□□ -0.72
COL1A1-210ENST00000504289 CGRRF1Q99675 332 aa10.56□□□□□ -0.72
COL1A1-210ENST00000504289 FAM213AQ9BRX8 229 aa10.56□□□□□ -0.72
COL1A1-210ENST00000504289 MSTO1Q9BUK6 570 aa10.56□□□□□ -0.72
COL1A1-210ENST00000504289 KIFC3Q9BVG8 833 aa10.56□□□□□ -0.72
COL1A1-210ENST00000504289 CCDC113Q9H0I3 377 aa10.56□□□□□ -0.72
COL1A1-210ENST00000504289 CARD9Q9H257 536 aa10.56□□□□□ -0.72
COL1A1-210ENST00000504289 TXNRD2Q9NNW7 524 aa10.56□□□□□ -0.72
COL1A1-210ENST00000504289 STIM2Q9P246 746 aa10.56□□□□□ -0.72
COL1A1-210ENST00000504289 UVRAGQ9P2Y5 699 aa10.56□□□□□ -0.72
COL1A1-210ENST00000504289 LCMT1Q9UIC8 334 aa10.56□□□□□ -0.72
COL1A1-210ENST00000504289 CNTN6Q9UQ52 1028 aa10.56□□□□□ -0.72
COL1A1-210ENST00000504289 PCDHB2Q9Y5E7 798 aa10.56□□□□□ -0.72
COL1A1-210ENST00000504289 PGRMC1O00264 195 aaKnown RBP10.55□□□□□ -0.72
COL1A1-210ENST00000504289 CLDN3O15551 220 aa10.55□□□□□ -0.72
COL1A1-210ENST00000504289 FTCDO95954 541 aa10.55□□□□□ -0.72
COL1A1-210ENST00000504289 HOXC6P09630 235 aa10.55□□□□□ -0.72
COL1A1-210ENST00000504289 ZBTB48P10074 688 aaPredicted RBP10.55□□□□□ -0.72
COL1A1-210ENST00000504289 TXNP10599 105 aaKnown RBP10.55□□□□□ -0.72
COL1A1-210ENST00000504289 PLA2G4AP47712 749 aa10.55□□□□□ -0.72
COL1A1-210ENST00000504289 PLCB4Q15147 1175 aa10.55□□□□□ -0.72
COL1A1-210ENST00000504289 MAPK6Q16659 721 aa10.55□□□□□ -0.72
COL1A1-210ENST00000504289 Q3C1V9 767 aa10.55□□□□□ -0.72
COL1A1-210ENST00000504289 ZNF792Q3KQV3 632 aa10.55□□□□□ -0.72
COL1A1-210ENST00000504289 C8orf74Q6P047 294 aa10.55□□□□□ -0.72
COL1A1-210ENST00000504289 MAMDC4Q6UXC1 1216 aa10.55□□□□□ -0.72
COL1A1-210ENST00000504289 DAAM2Q86T65 1068 aa10.55□□□□□ -0.72
COL1A1-210ENST00000504289 WDR49Q8IV35 697 aa10.55□□□□□ -0.72
COL1A1-210ENST00000504289 BRSK2Q8IWQ3 736 aa10.55□□□□□ -0.72
COL1A1-210ENST00000504289 TAS1R2Q8TE23 839 aa10.55□□□□□ -0.72
COL1A1-210ENST00000504289 PRPF31Q8WWY3 499 aaKnown RBP10.55□□□□□ -0.72
COL1A1-210ENST00000504289 SEMA4DQ92854 862 aa10.55□□□□□ -0.72
COL1A1-210ENST00000504289 VCPIP1Q96JH7 1222 aa10.55□□□□□ -0.72
COL1A1-210ENST00000504289 SPATA33Q96N06 139 aa10.55□□□□□ -0.72
COL1A1-210ENST00000504289 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.55□□□□□ -0.72
COL1A1-210ENST00000504289 EPC1Q9H2F5 836 aa10.55□□□□□ -0.72
COL1A1-210ENST00000504289 SLITRK6Q9H5Y7 841 aa10.55□□□□□ -0.72
COL1A1-210ENST00000504289 FAM124BQ9H5Z6 455 aaPredicted RBP10.55□□□□□ -0.72
COL1A1-210ENST00000504289 MED4Q9NPJ6 270 aa10.55□□□□□ -0.72
COL1A1-210ENST00000504289 RBAKQ9NYW8 714 aaPredicted RBP10.55□□□□□ -0.72
COL1A1-210ENST00000504289 ERAP1Q9NZ08 941 aa10.55□□□□□ -0.72
COL1A1-210ENST00000504289 GTF3C4Q9UKN8 822 aa10.55□□□□□ -0.72
COL1A1-210ENST00000504289 ZNFX1Q9P2E3 1918 aaKnown RBP10.54□□□□□ -0.72
COL1A1-210ENST00000504289 SPDYE4A6NLX3 237 aa10.54□□□□□ -0.72
COL1A1-210ENST00000504289 ACKR2O00590 384 aa10.54□□□□□ -0.72
COL1A1-210ENST00000504289 KCNK3O14649 394 aa10.54□□□□□ -0.72
COL1A1-210ENST00000504289 OGTO15294 1046 aa10.54□□□□□ -0.72
COL1A1-210ENST00000504289 NCK2O43639 380 aa10.54□□□□□ -0.72
COL1A1-210ENST00000504289 MSCO60682 206 aa10.54□□□□□ -0.72
COL1A1-210ENST00000504289 LRRN2O75325 713 aa10.54□□□□□ -0.72
COL1A1-210ENST00000504289 GH1P01241 217 aa10.54□□□□□ -0.72
COL1A1-210ENST00000504289 TFRCP02786 760 aaKnown RBP10.54□□□□□ -0.72
COL1A1-210ENST00000504289 FTLP02792 175 aaPredicted RBP10.54□□□□□ -0.72
COL1A1-210ENST00000504289 CYP1A2P05177 515 aa10.54□□□□□ -0.72
COL1A1-210ENST00000504289 POTEJP0CG39 1038 aa10.54□□□□□ -0.72
COL1A1-210ENST00000504289 DLATP10515 647 aaKnown RBP10.54□□□□□ -0.72
COL1A1-210ENST00000504289 CYP11B1P15538 503 aa10.54□□□□□ -0.72
COL1A1-210ENST00000504289 CHRNB2P17787 502 aa10.54□□□□□ -0.72
COL1A1-210ENST00000504289 TNNI1P19237 187 aa10.54□□□□□ -0.72
COL1A1-210ENST00000504289 AARSP49588 968 aaKnown RBP eCLIP10.54□□□□□ -0.72
COL1A1-210ENST00000504289 EPHB4P54760 987 aa10.54□□□□□ -0.72
COL1A1-210ENST00000504289 SOX10P56693 466 aa10.54□□□□□ -0.72
COL1A1-210ENST00000504289 CBX1P83916 185 aa10.54□□□□□ -0.72
COL1A1-210ENST00000504289 CDC42EP1Q00587 391 aa10.54□□□□□ -0.72
COL1A1-210ENST00000504289 MCL1Q07820 350 aa10.54□□□□□ -0.72
COL1A1-210ENST00000504289 LAMTOR4Q0VGL1 99 aa10.54□□□□□ -0.72
COL1A1-210ENST00000504289 SMC1AQ14683 1233 aaKnown RBP10.54□□□□□ -0.72
COL1A1-210ENST00000504289 FAM187BQ17R55 369 aa10.54□□□□□ -0.72
COL1A1-210ENST00000504289 LY6KQ17RY6 165 aa10.54□□□□□ -0.72
COL1A1-210ENST00000504289 ACAD10Q6JQN1 1059 aa10.54□□□□□ -0.72
COL1A1-210ENST00000504289 CRELD2Q6UXH1 353 aaPredicted RBP10.54□□□□□ -0.72
COL1A1-210ENST00000504289 TSHZ1Q6ZSZ6 1077 aa10.54□□□□□ -0.72
COL1A1-210ENST00000504289 TRMT1LQ7Z2T5 733 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms