RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 RNASET2O00584 256 aaKnown RBP3.28□□□□□ -1.88
HMGB1P35-201ENST00000503360 GABRDO14764 452 aa3.28□□□□□ -1.88
HMGB1P35-201ENST00000503360 ALDH1L1O75891 902 aa3.28□□□□□ -1.88
HMGB1P35-201ENST00000503360 APOL3O95236 402 aa3.28□□□□□ -1.88
HMGB1P35-201ENST00000503360 NPEPPSP55786 919 aa3.28□□□□□ -1.88
HMGB1P35-201ENST00000503360 SCAND1P57086 179 aa3.28□□□□□ -1.88
HMGB1P35-201ENST00000503360 ERVK-21P61565 698 aa3.28□□□□□ -1.88
HMGB1P35-201ENST00000503360 SLC6A3Q01959 620 aa3.28□□□□□ -1.88
HMGB1P35-201ENST00000503360 PDCD1Q15116 288 aa3.28□□□□□ -1.88
HMGB1P35-201ENST00000503360 TTC38Q5R3I4 469 aa3.28□□□□□ -1.88
HMGB1P35-201ENST00000503360 PRAMEF9Q5VWM5 478 aa3.28□□□□□ -1.88
HMGB1P35-201ENST00000503360 TIGD7Q6NT04 549 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P35-201ENST00000503360 PHYKPLQ8IUZ5 450 aa3.28□□□□□ -1.88
HMGB1P35-201ENST00000503360 LCORLQ8N3X6 602 aa3.28□□□□□ -1.88
HMGB1P35-201ENST00000503360 C7orf31Q8N865 590 aa3.28□□□□□ -1.88
HMGB1P35-201ENST00000503360 GLB1L3Q8NCI6 653 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P35-201ENST00000503360 OR52N2Q8NGI0 321 aa3.28□□□□□ -1.88
HMGB1P35-201ENST00000503360 ARL8AQ96BM9 186 aa3.28□□□□□ -1.88
HMGB1P35-201ENST00000503360 MAML3Q96JK9 1138 aa3.28□□□□□ -1.88
HMGB1P35-201ENST00000503360 WDR92Q96MX6 357 aa3.28□□□□□ -1.88
HMGB1P35-201ENST00000503360 FAM193BQ96PV7 902 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P35-201ENST00000503360 TUBGCP5Q96RT8 1024 aa3.28□□□□□ -1.88
HMGB1P35-201ENST00000503360 MYL10Q9BUA6 226 aa3.28□□□□□ -1.88
HMGB1P35-201ENST00000503360 ANO3Q9BYT9 981 aa3.28□□□□□ -1.88
HMGB1P35-201ENST00000503360 OSBPL6Q9BZF3 934 aa3.28□□□□□ -1.88
HMGB1P35-201ENST00000503360 POFUT1Q9H488 388 aa3.28□□□□□ -1.88
HMGB1P35-201ENST00000503360 METTL14Q9HCE5 456 aaKnown RBP3.28□□□□□ -1.88
HMGB1P35-201ENST00000503360 USP36Q9P275 1121 aaKnown RBP3.28□□□□□ -1.88
HMGB1P35-201ENST00000503360 KCNG1Q9UIX4 513 aa3.28□□□□□ -1.88
HMGB1P35-201ENST00000503360 CLCA2Q9UQC9 943 aa3.28□□□□□ -1.88
HMGB1P35-201ENST00000503360 TNKSO95271 1327 aa3.27□□□□□ -1.89
HMGB1P35-201ENST00000503360 WASHC2AQ641Q2 1341 aa3.27□□□□□ -1.89
HMGB1P35-201ENST00000503360 PIPSLA2A3N6 862 aa3.27□□□□□ -1.89
HMGB1P35-201ENST00000503360 ELL2O00472 640 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P35-201ENST00000503360 NRP1O14786 923 aa3.27□□□□□ -1.89
HMGB1P35-201ENST00000503360 IKBKBO14920 756 aa3.27□□□□□ -1.89
HMGB1P35-201ENST00000503360 DAPK3O43293 454 aa3.27□□□□□ -1.89
HMGB1P35-201ENST00000503360 PRPF6O94906 941 aaKnown RBP3.27□□□□□ -1.89
HMGB1P35-201ENST00000503360 SCAF4O95104 1147 aaKnown RBP3.27□□□□□ -1.89
HMGB1P35-201ENST00000503360 ZFPL1O95159 310 aa3.27□□□□□ -1.89
HMGB1P35-201ENST00000503360 MT-CO1P00395 513 aa3.27□□□□□ -1.89
HMGB1P35-201ENST00000503360 PRLP01236 227 aa3.27□□□□□ -1.89
HMGB1P35-201ENST00000503360 MYBL2P10244 700 aa3.27□□□□□ -1.89
HMGB1P35-201ENST00000503360 IARSP41252 1262 aaKnown RBP3.27□□□□□ -1.89
HMGB1P35-201ENST00000503360 KIR2DL3P43628 341 aa3.27□□□□□ -1.89
HMGB1P35-201ENST00000503360 RGS3P49796 1198 aa3.27□□□□□ -1.89
HMGB1P35-201ENST00000503360 ROM1Q03395 351 aa3.27□□□□□ -1.89
HMGB1P35-201ENST00000503360 KLF1Q13351 362 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P35-201ENST00000503360 TTF1Q15361 905 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P35-201ENST00000503360 ABCB5Q2M3G0 1257 aa3.27□□□□□ -1.89
HMGB1P35-201ENST00000503360 ABHD17BQ5VST6 288 aa3.27□□□□□ -1.89
HMGB1P35-201ENST00000503360 SLFN12LQ6IEE8 588 aa3.27□□□□□ -1.89
HMGB1P35-201ENST00000503360 PGM2L1Q6PCE3 622 aa3.27□□□□□ -1.89
HMGB1P35-201ENST00000503360 ESPNLQ6ZVH7 1005 aa3.27□□□□□ -1.89
HMGB1P35-201ENST00000503360 DOK3Q7L591 496 aa3.27□□□□□ -1.89
HMGB1P35-201ENST00000503360 CBARPQ8N350 705 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P35-201ENST00000503360 MB21D1Q8N884 522 aa3.27□□□□□ -1.89
HMGB1P35-201ENST00000503360 BOLLQ8N9W6 283 aaKnown RBP3.27□□□□□ -1.89
HMGB1P35-201ENST00000503360 TGFBRAP1Q8WUH2 860 aa3.27□□□□□ -1.89
HMGB1P35-201ENST00000503360 LMBR1Q8WVP7 490 aa3.27□□□□□ -1.89
HMGB1P35-201ENST00000503360 JDP2Q8WYK2 163 aa3.27□□□□□ -1.89
HMGB1P35-201ENST00000503360 PGBD4Q96DM1 585 aa3.27□□□□□ -1.89
HMGB1P35-201ENST00000503360 SPATA5L1Q9BVQ7 753 aa3.27□□□□□ -1.89
HMGB1P35-201ENST00000503360 WDR11Q9BZH6 1224 aa3.27□□□□□ -1.89
HMGB1P35-201ENST00000503360 ENKD1Q9H0I2 346 aa3.27□□□□□ -1.89
HMGB1P35-201ENST00000503360 KMT5AQ9NQR1 393 aa3.27□□□□□ -1.89
HMGB1P35-201ENST00000503360 THRAP3Q9Y2W1 955 aaKnown RBP3.27□□□□□ -1.89
HMGB1P35-201ENST00000503360 CACNA1IQ9P0X4 2223 aa3.26□□□□□ -1.89
HMGB1P35-201ENST00000503360 SHTN1A0MZ66 631 aa3.26□□□□□ -1.89
HMGB1P35-201ENST00000503360 MYADML2A6NDP7 307 aa3.26□□□□□ -1.89
HMGB1P35-201ENST00000503360 HOXA3O43365 443 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P35-201ENST00000503360 KCNAB3O43448 404 aa3.26□□□□□ -1.89
HMGB1P35-201ENST00000503360 PROP1O75360 226 aa3.26□□□□□ -1.89
HMGB1P35-201ENST00000503360 ESRRBO95718 433 aa3.26□□□□□ -1.89
HMGB1P35-201ENST00000503360 CLEC2LP0C7M8 214 aa3.26□□□□□ -1.89
HMGB1P35-201ENST00000503360 HOXB6P17509 224 aaKnown RBP3.26□□□□□ -1.89
HMGB1P35-201ENST00000503360 CXCR5P32302 372 aa3.26□□□□□ -1.89
HMGB1P35-201ENST00000503360 NEK2P51955 445 aa3.26□□□□□ -1.89
HMGB1P35-201ENST00000503360 MANFP55145 182 aaKnown RBP3.26□□□□□ -1.89
HMGB1P35-201ENST00000503360 WNT3AP56704 352 aa3.26□□□□□ -1.89
HMGB1P35-201ENST00000503360 ADCY2Q08462 1091 aa3.26□□□□□ -1.89
HMGB1P35-201ENST00000503360 MYBPC3Q14896 1274 aa3.26□□□□□ -1.89
HMGB1P35-201ENST00000503360 ACAP1Q15027 740 aa3.26□□□□□ -1.89
HMGB1P35-201ENST00000503360 VPS72Q15906 364 aa3.26□□□□□ -1.89
HMGB1P35-201ENST00000503360 MAN2A1Q16706 1144 aa3.26□□□□□ -1.89
HMGB1P35-201ENST00000503360 PTPN21Q16825 1174 aa3.26□□□□□ -1.89
HMGB1P35-201ENST00000503360 INAVAQ3KP66 663 aa3.26□□□□□ -1.89
HMGB1P35-201ENST00000503360 CT83Q5H943 113 aa3.26□□□□□ -1.89
HMGB1P35-201ENST00000503360 KRT40Q6A162 431 aa3.26□□□□□ -1.89
HMGB1P35-201ENST00000503360 ARMC6Q6NXE6 501 aa3.26□□□□□ -1.89
HMGB1P35-201ENST00000503360 UNQ6494/PRO21346Q6UXR6 183 aa3.26□□□□□ -1.89
HMGB1P35-201ENST00000503360 RAVER1Q8IY67 606 aaKnown RBP3.26□□□□□ -1.89
HMGB1P35-201ENST00000503360 CAGE1Q8TC20 777 aa3.26□□□□□ -1.89
HMGB1P35-201ENST00000503360 FERMT2Q96AC1 680 aa3.26□□□□□ -1.89
HMGB1P35-201ENST00000503360 FUBP3Q96I24 572 aaKnown RBP eCLIP3.26□□□□□ -1.89
HMGB1P35-201ENST00000503360 ACAP3Q96P50 834 aa3.26□□□□□ -1.89
HMGB1P35-201ENST00000503360 NDC1Q9BTX1 674 aa3.26□□□□□ -1.89
HMGB1P35-201ENST00000503360 POLR3BQ9NW08 1133 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P35-201ENST00000503360 SPEF1Q9Y4P9 236 aa3.26□□□□□ -1.89
HMGB1P35-201ENST00000503360 PPP2R3BQ9Y5P8 575 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms