RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 ACCSQ96QU6 501 aa18.34■□□□□ 0.53
PRKCB-210ENST00000498739 HAPLN2Q9GZV7 340 aa18.34■□□□□ 0.53
PRKCB-210ENST00000498739 NRDE2Q9H7Z3 1164 aa18.34■□□□□ 0.53
PRKCB-210ENST00000498739 MIOSQ9NXC5 875 aa18.34■□□□□ 0.53
PRKCB-210ENST00000498739 EXOC7Q9UPT5 735 aa18.34■□□□□ 0.53
PRKCB-210ENST00000498739 SZT2Q5T011 3432 aa18.34■□□□□ 0.53
PRKCB-210ENST00000498739 CHD9Q3L8U1 2897 aa18.33■□□□□ 0.53
PRKCB-210ENST00000498739 ZMYM2Q9UBW7 1377 aa18.33■□□□□ 0.53
PRKCB-210ENST00000498739 ANKRD63C9JTQ0 380 aa18.33■□□□□ 0.52
PRKCB-210ENST00000498739 DDHD2O94830 711 aa18.33■□□□□ 0.52
PRKCB-210ENST00000498739 PRPF6O94906 941 aaKnown RBP18.33■□□□□ 0.52
PRKCB-210ENST00000498739 MYL1P05976 194 aa18.33■□□□□ 0.52
PRKCB-210ENST00000498739 YARSP54577 528 aaKnown RBP18.33■□□□□ 0.52
PRKCB-210ENST00000498739 BCAR1P56945 870 aa18.33■□□□□ 0.52
PRKCB-210ENST00000498739 SEZ6Q53EL9 994 aa18.33■□□□□ 0.52
PRKCB-210ENST00000498739 SLC39A4Q6P5W5 647 aa18.33■□□□□ 0.52
PRKCB-210ENST00000498739 SYCP3Q8IZU3 236 aa18.33■□□□□ 0.52
PRKCB-210ENST00000498739 ENGASEQ8NFI3 743 aa18.33■□□□□ 0.52
PRKCB-210ENST00000498739 IKZF4Q9H2S9 585 aa18.33■□□□□ 0.52
PRKCB-210ENST00000498739 ALG13Q9NP73 1137 aaKnown RBP18.33■□□□□ 0.52
PRKCB-210ENST00000498739 EXOC1Q9NV70 894 aa18.33■□□□□ 0.52
PRKCB-210ENST00000498739 DNAJB4Q9UDY4 337 aa18.33■□□□□ 0.52
PRKCB-210ENST00000498739 STXBP5LQ9Y2K9 1186 aa18.33■□□□□ 0.52
PRKCB-210ENST00000498739 TISP43B9A030 160 aa18.32■□□□□ 0.52
PRKCB-210ENST00000498739 NT5C1B-RDH14C9J2C7 533 aa18.32■□□□□ 0.52
PRKCB-210ENST00000498739 GRM6O15303 877 aa18.32■□□□□ 0.52
PRKCB-210ENST00000498739 KLRC4O43908 158 aa18.32■□□□□ 0.52
PRKCB-210ENST00000498739 B4GALT3O60512 393 aa18.32■□□□□ 0.52
PRKCB-210ENST00000498739 CSPG5O95196 566 aa18.32■□□□□ 0.52
PRKCB-210ENST00000498739 ITGB1P05556 798 aa18.32■□□□□ 0.52
PRKCB-210ENST00000498739 ALDH7A1P49419 539 aaKnown RBP18.32■□□□□ 0.52
PRKCB-210ENST00000498739 EHHADHQ08426 723 aa18.32■□□□□ 0.52
PRKCB-210ENST00000498739 GRIK3Q13003 919 aa18.32■□□□□ 0.52
PRKCB-210ENST00000498739 SNW1Q13573 536 aaKnown RBP18.32■□□□□ 0.52
PRKCB-210ENST00000498739 KMT5BQ4FZB7 885 aa18.32■□□□□ 0.52
PRKCB-210ENST00000498739 KANK3Q6NY19 840 aa18.32■□□□□ 0.52
PRKCB-210ENST00000498739 GSTCDQ8NEC7 633 aa18.32■□□□□ 0.52
PRKCB-210ENST00000498739 ACAP3Q96P50 834 aa18.32■□□□□ 0.52
PRKCB-210ENST00000498739 MSTO1Q9BUK6 570 aa18.32■□□□□ 0.52
PRKCB-210ENST00000498739 TMEM206Q9H813 350 aa18.32■□□□□ 0.52
PRKCB-210ENST00000498739 SLC39A2Q9NP94 309 aa18.32■□□□□ 0.52
PRKCB-210ENST00000498739 TOPORSQ9NS56 1045 aaPredicted RBP18.32■□□□□ 0.52
PRKCB-210ENST00000498739 PLAGL2Q9UPG8 496 aa18.32■□□□□ 0.52
PRKCB-210ENST00000498739 PTGESO14684 152 aa18.31■□□□□ 0.52
PRKCB-210ENST00000498739 EIF3DO15371 548 aaKnown RBP eCLIP18.31■□□□□ 0.52
PRKCB-210ENST00000498739 NR1I2O75469 434 aa18.31■□□□□ 0.52
PRKCB-210ENST00000498739 FGF18O76093 207 aa18.31■□□□□ 0.52
PRKCB-210ENST00000498739 RPN1P04843 607 aaKnown RBP18.31■□□□□ 0.52
PRKCB-210ENST00000498739 PPM1AP35813 382 aa18.31■□□□□ 0.52
PRKCB-210ENST00000498739 SLC11A1P49279 550 aa18.31■□□□□ 0.52
PRKCB-210ENST00000498739 DPYDQ12882 1025 aa18.31■□□□□ 0.52
PRKCB-210ENST00000498739 PTPROQ16827 1216 aa18.31■□□□□ 0.52
PRKCB-210ENST00000498739 GLRA4Q5JXX5 417 aa18.31■□□□□ 0.52
PRKCB-210ENST00000498739 SLFN12LQ6IEE8 588 aa18.31■□□□□ 0.52
PRKCB-210ENST00000498739 MICALL1Q8N3F8 863 aa18.31■□□□□ 0.52
PRKCB-210ENST00000498739 CXCL16Q9H2A7 254 aa18.31■□□□□ 0.52
PRKCB-210ENST00000498739 SPG21Q9NZD8 308 aa18.31■□□□□ 0.52
PRKCB-210ENST00000498739 MTCH2Q9Y6C9 303 aa18.31■□□□□ 0.52
PRKCB-210ENST00000498739 A0A0B4J269 797 aa18.3■□□□□ 0.52
PRKCB-210ENST00000498739 OGTO15294 1046 aa18.3■□□□□ 0.52
PRKCB-210ENST00000498739 PRPF40AO75400 957 aaKnown RBP18.3■□□□□ 0.52
PRKCB-210ENST00000498739 THP07101 528 aa18.3■□□□□ 0.52
PRKCB-210ENST00000498739 GALTP07902 379 aa18.3■□□□□ 0.52
PRKCB-210ENST00000498739 OR1G1P47890 313 aa18.3■□□□□ 0.52
PRKCB-210ENST00000498739 POSTNQ15063 836 aa18.3■□□□□ 0.52
PRKCB-210ENST00000498739 EPM2AIP1Q7L775 607 aaPredicted RBP18.3■□□□□ 0.52
PRKCB-210ENST00000498739 COLGALT2Q8IYK4 626 aa18.3■□□□□ 0.52
PRKCB-210ENST00000498739 SLC39A11Q8N1S5 342 aa18.3■□□□□ 0.52
PRKCB-210ENST00000498739 SPPL3Q8TCT6 385 aa18.3■□□□□ 0.52
PRKCB-210ENST00000498739 POF1BQ8WVV4 589 aa18.3■□□□□ 0.52
PRKCB-210ENST00000498739 POMGNT1Q8WZA1 660 aa18.3■□□□□ 0.52
PRKCB-210ENST00000498739 CCDC47Q96A33 483 aaKnown RBP18.3■□□□□ 0.52
PRKCB-210ENST00000498739 SNX27Q96L92 541 aa18.3■□□□□ 0.52
PRKCB-210ENST00000498739 TMEM175Q9BSA9 504 aa18.3■□□□□ 0.52
PRKCB-210ENST00000498739 LMAN2LQ9H0V9 348 aa18.3■□□□□ 0.52
PRKCB-210ENST00000498739 CARNS1A5YM72 827 aa18.29■□□□□ 0.52
PRKCB-210ENST00000498739 NRP1O14786 923 aa18.29■□□□□ 0.52
PRKCB-210ENST00000498739 ALDH2P05091 517 aa18.29■□□□□ 0.52
PRKCB-210ENST00000498739 CLTAP09496 248 aa18.29■□□□□ 0.52
PRKCB-210ENST00000498739 POU3F3P20264 500 aaPredicted RBP18.29■□□□□ 0.52
PRKCB-210ENST00000498739 TNFSF9P41273 254 aa18.29■□□□□ 0.52
PRKCB-210ENST00000498739 UBE2HP62256 183 aa18.29■□□□□ 0.52
PRKCB-210ENST00000498739 KRT17Q04695 432 aa18.29■□□□□ 0.52
PRKCB-210ENST00000498739 DSC1Q08554 894 aa18.29■□□□□ 0.52
PRKCB-210ENST00000498739 KYAT1Q16773 422 aa18.29■□□□□ 0.52
PRKCB-210ENST00000498739 ZBTB41Q5SVQ8 909 aa18.29■□□□□ 0.52
PRKCB-210ENST00000498739 NELFCDQ8IXH7 590 aa18.29■□□□□ 0.52
PRKCB-210ENST00000498739 MAFAQ8NHW3 353 aaPredicted RBP18.29■□□□□ 0.52
PRKCB-210ENST00000498739 ZNF507Q8TCN5 953 aa18.29■□□□□ 0.52
PRKCB-210ENST00000498739 PPM1EQ8WY54 764 aa18.29■□□□□ 0.52
PRKCB-210ENST00000498739 MRPL38Q96DV4 380 aaKnown RBP18.29■□□□□ 0.52
PRKCB-210ENST00000498739 TMEM169Q96HH4 297 aa18.29■□□□□ 0.52
PRKCB-210ENST00000498739 TIGD1Q96MW7 591 aa18.29■□□□□ 0.52
PRKCB-210ENST00000498739 LMCD1Q9NZU5 365 aa18.29■□□□□ 0.52
PRKCB-210ENST00000498739 FAN1Q9Y2M0 1017 aa18.29■□□□□ 0.52
PRKCB-210ENST00000498739 PRG3Q9Y2Y8 225 aaPredicted RBP18.29■□□□□ 0.52
PRKCB-210ENST00000498739 STYXL1Q9Y6J8 313 aa18.29■□□□□ 0.52
PRKCB-210ENST00000498739 UBE4BO95155 1302 aa18.28■□□□□ 0.52
PRKCB-210ENST00000498739 KINO60870 393 aaKnown RBP18.28■□□□□ 0.52
PRKCB-210ENST00000498739 CXCL8P10145 99 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms