RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 NACC1Q96RE7 527 aa20.5■□□□□ 0.87
PRKCB-209ENST00000498058 MYADMQ96S97 322 aa20.5■□□□□ 0.87
PRKCB-209ENST00000498058 WDR6Q9NNW5 1121 aaKnown RBP20.5■□□□□ 0.87
PRKCB-209ENST00000498058 PRMT7Q9NVM4 692 aaPredicted RBP20.5■□□□□ 0.87
PRKCB-209ENST00000498058 SNTG2Q9NY99 539 aa20.5■□□□□ 0.87
PRKCB-209ENST00000498058 LIMCH1Q9UPQ0 1083 aa20.5■□□□□ 0.87
PRKCB-209ENST00000498058 ZMYM2Q9UBW7 1377 aa20.49■□□□□ 0.87
PRKCB-209ENST00000498058 PI15O43692 258 aa20.49■□□□□ 0.87
PRKCB-209ENST00000498058 CYP11B2P19099 503 aa20.49■□□□□ 0.87
PRKCB-209ENST00000498058 TDGQ13569 410 aa20.49■□□□□ 0.87
PRKCB-209ENST00000498058 USP41Q3LFD5 358 aa20.49■□□□□ 0.87
PRKCB-209ENST00000498058 ASTLQ6HA08 431 aaPredicted RBP20.49■□□□□ 0.87
PRKCB-209ENST00000498058 NOSTRINQ8IVI9 506 aa20.49■□□□□ 0.87
PRKCB-209ENST00000498058 HACE1Q8IYU2 909 aa20.49■□□□□ 0.87
PRKCB-209ENST00000498058 RIN2Q8WYP3 895 aaPredicted RBP20.49■□□□□ 0.87
PRKCB-209ENST00000498058 ATOH1Q92858 354 aaPredicted RBP20.49■□□□□ 0.87
PRKCB-209ENST00000498058 C8orf76Q96K31 380 aa20.49■□□□□ 0.87
PRKCB-209ENST00000498058 PRIMPOLQ96LW4 560 aa20.49■□□□□ 0.87
PRKCB-209ENST00000498058 KIF2CQ99661 725 aa20.49■□□□□ 0.87
PRKCB-209ENST00000498058 KIFC3Q9BVG8 833 aa20.49■□□□□ 0.87
PRKCB-209ENST00000498058 RHOBTB2Q9BYZ6 727 aa20.49■□□□□ 0.87
PRKCB-209ENST00000498058 CASTOR2A6NHX0 329 aa20.48■□□□□ 0.87
PRKCB-209ENST00000498058 KIF4AO95239 1232 aa20.48■□□□□ 0.87
PRKCB-209ENST00000498058 TUSC3Q13454 348 aa20.48■□□□□ 0.87
PRKCB-209ENST00000498058 HSP90AA2PQ14568 343 aaPredicted RBP20.48■□□□□ 0.87
PRKCB-209ENST00000498058 SMG7Q92540 1137 aaKnown RBP20.48■□□□□ 0.87
PRKCB-209ENST00000498058 NT5C3AQ9H0P0 336 aa20.48■□□□□ 0.87
PRKCB-209ENST00000498058 FOXP1Q9H334 677 aaPredicted RBP20.48■□□□□ 0.87
PRKCB-209ENST00000498058 FNIP2Q9P278 1114 aa20.48■□□□□ 0.87
PRKCB-209ENST00000498058 DUSP12Q9UNI6 340 aa20.48■□□□□ 0.87
PRKCB-209ENST00000498058 CLUHO75153 1309 aa20.48■□□□□ 0.87
PRKCB-209ENST00000498058 ST18O60284 1047 aa20.47■□□□□ 0.87
PRKCB-209ENST00000498058 NR1I2O75469 434 aa20.47■□□□□ 0.87
PRKCB-209ENST00000498058 RECQL4O94761 1208 aa20.47■□□□□ 0.87
PRKCB-209ENST00000498058 PRKCBP05771 671 aa20.47■□□□□ 0.87
PRKCB-209ENST00000498058 LIG1P18858 919 aa20.47■□□□□ 0.87
PRKCB-209ENST00000498058 PRPF4BQ13523 1007 aaKnown RBP20.47■□□□□ 0.87
PRKCB-209ENST00000498058 SAFBQ15424 915 aaKnown RBP eCLIP20.47■□□□□ 0.87
PRKCB-209ENST00000498058 TTC38Q5R3I4 469 aa20.47■□□□□ 0.87
PRKCB-209ENST00000498058 ZBTB8OSQ8IWT0 167 aa20.47■□□□□ 0.87
PRKCB-209ENST00000498058 ST13P5Q8NFI4 369 aaPredicted RBP20.47■□□□□ 0.87
PRKCB-209ENST00000498058 FBXO18Q8NFZ0 1043 aa20.47■□□□□ 0.87
PRKCB-209ENST00000498058 ZFHX2Q9C0A1 2572 aaPredicted RBP20.46■□□□□ 0.87
PRKCB-209ENST00000498058 ARHGEF35A5YM69 484 aa20.46■□□□□ 0.87
PRKCB-209ENST00000498058 ACKR2O00590 384 aa20.46■□□□□ 0.87
PRKCB-209ENST00000498058 N4BP3O15049 544 aa20.46■□□□□ 0.87
PRKCB-209ENST00000498058 ADAM12O43184 909 aa20.46■□□□□ 0.87
PRKCB-209ENST00000498058 TADA2AO75478 443 aa20.46■□□□□ 0.87
PRKCB-209ENST00000498058 GBP2P32456 591 aaPredicted RBP20.46■□□□□ 0.87
PRKCB-209ENST00000498058 TOB1P50616 345 aaPredicted RBP20.46■□□□□ 0.87
PRKCB-209ENST00000498058 NUBP1P53384 320 aa20.46■□□□□ 0.87
PRKCB-209ENST00000498058 NT5DC1Q5TFE4 455 aa20.46■□□□□ 0.87
PRKCB-209ENST00000498058 GPR65Q8IYL9 337 aa20.46■□□□□ 0.87
PRKCB-209ENST00000498058 FLCNQ8NFG4 579 aa20.46■□□□□ 0.87
PRKCB-209ENST00000498058 HDAC7Q8WUI4 952 aa20.46■□□□□ 0.87
PRKCB-209ENST00000498058 CLSTN3Q9BQT9 956 aa20.46■□□□□ 0.87
PRKCB-209ENST00000498058 LLPHQ9BRT6 129 aaKnown RBP20.46■□□□□ 0.87
PRKCB-209ENST00000498058 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.46■□□□□ 0.87
PRKCB-209ENST00000498058 EPS15L1Q9UBC2 864 aa20.46■□□□□ 0.87
PRKCB-209ENST00000498058 MYO15AQ9UKN7 3530 aa20.45■□□□□ 0.86
PRKCB-209ENST00000498058 NAMPTP43490 491 aa20.45■□□□□ 0.86
PRKCB-209ENST00000498058 CLCN5P51795 746 aa20.45■□□□□ 0.86
PRKCB-209ENST00000498058 MAPK6Q16659 721 aa20.45■□□□□ 0.86
PRKCB-209ENST00000498058 CD300LGQ6UXG3 332 aa20.45■□□□□ 0.86
PRKCB-209ENST00000498058 CYP26C1Q6V0L0 522 aa20.45■□□□□ 0.86
PRKCB-209ENST00000498058 ERMNQ8TAM6 284 aa20.45■□□□□ 0.86
PRKCB-209ENST00000498058 LNX1Q8TBB1 728 aaPredicted RBP20.45■□□□□ 0.86
PRKCB-209ENST00000498058 PRKD2Q9BZL6 878 aa20.45■□□□□ 0.86
PRKCB-209ENST00000498058 C2orf40Q9H1Z8 148 aa20.45■□□□□ 0.86
PRKCB-209ENST00000498058 MFSD1Q9H3U5 465 aa20.45■□□□□ 0.86
PRKCB-209ENST00000498058 PLEKHA4Q9H4M7 779 aa20.45■□□□□ 0.86
PRKCB-209ENST00000498058 IGSF9Q9P2J2 1179 aa20.45■□□□□ 0.86
PRKCB-209ENST00000498058 NOTCH4Q99466 2003 aa20.44■□□□□ 0.86
PRKCB-209ENST00000498058 KRBA1A5PL33 1030 aa20.44■□□□□ 0.86
PRKCB-209ENST00000498058 GFRA3O60609 400 aa20.44■□□□□ 0.86
PRKCB-209ENST00000498058 ZMYND10O75800 440 aa20.44■□□□□ 0.86
PRKCB-209ENST00000498058 C1RP00736 705 aa20.44■□□□□ 0.86
PRKCB-209ENST00000498058 CCT6AP40227 531 aaKnown RBP20.44■□□□□ 0.86
PRKCB-209ENST00000498058 FXR2P51116 673 aaKnown RBP eCLIP20.44■□□□□ 0.865e-10■■■□□ 15.9
PRKCB-209ENST00000498058 ORC2Q13416 577 aaPredicted RBP20.44■□□□□ 0.86
PRKCB-209ENST00000498058 FAM171A1Q5VUB5 890 aa20.44■□□□□ 0.86
PRKCB-209ENST00000498058 SIX5Q8N196 739 aa20.44■□□□□ 0.86
PRKCB-209ENST00000498058 SLC44A3Q8N4M1 653 aa20.44■□□□□ 0.86
PRKCB-209ENST00000498058 DEPTORQ8TB45 409 aa20.44■□□□□ 0.86
PRKCB-209ENST00000498058 BHMT2Q9H2M3 363 aa20.44■□□□□ 0.86
PRKCB-209ENST00000498058 ZDHHC7Q9NXF8 308 aa20.44■□□□□ 0.86
PRKCB-209ENST00000498058 FBXW11Q9UKB1 542 aa20.44■□□□□ 0.86
PRKCB-209ENST00000498058 GDAQ9Y2T3 454 aa20.44■□□□□ 0.86
PRKCB-209ENST00000498058 SF3B1O75533 1304 aaKnown RBP eCLIP20.44■□□□□ 0.863e-6■■■■■ 50.6
PRKCB-209ENST00000498058 CFAP54Q96N23 3096 aa20.44■□□□□ 0.86
PRKCB-209ENST00000498058 THP07101 528 aa20.43■□□□□ 0.86
PRKCB-209ENST00000498058 CFHP08603 1231 aa20.43■□□□□ 0.86
PRKCB-209ENST00000498058 AOC1P19801 751 aa20.43■□□□□ 0.86
PRKCB-209ENST00000498058 NTHL1P78549 312 aa20.43■□□□□ 0.86
PRKCB-209ENST00000498058 IL17AQ16552 155 aa20.43■□□□□ 0.86
PRKCB-209ENST00000498058 GLRA4Q5JXX5 417 aa20.43■□□□□ 0.86
PRKCB-209ENST00000498058 ASCL5Q7RTU5 278 aa20.43■□□□□ 0.86
PRKCB-209ENST00000498058 CEP57Q86XR8 500 aa20.43■□□□□ 0.86
PRKCB-209ENST00000498058 PIK3R5Q8WYR1 880 aa20.43■□□□□ 0.86
PRKCB-209ENST00000498058 TTPALQ9BTX7 342 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms