RNA–Protein interactions for RNA: ENST00000498034.5

LMBR1-219, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-219ENST00000498034 KRT79Q5XKE5 535 aa22.41■■□□□ 1.18
LMBR1-219ENST00000498034 DTHD1Q6ZMT9 781 aa22.41■■□□□ 1.18
LMBR1-219ENST00000498034 KCNH6Q9H252 994 aa22.41■■□□□ 1.18
LMBR1-219ENST00000498034 LIMD1Q9UGP4 676 aa22.41■■□□□ 1.18
LMBR1-219ENST00000498034 SORCS3Q9UPU3 1222 aa22.41■■□□□ 1.18
LMBR1-219ENST00000498034 DNM3Q9UQ16 869 aa22.41■■□□□ 1.18
LMBR1-219ENST00000498034 GDAQ9Y2T3 454 aa22.41■■□□□ 1.18
LMBR1-219ENST00000498034 MYO10Q9HD67 2058 aa22.41■■□□□ 1.18
LMBR1-219ENST00000498034 C2orf16Q68DN1 1984 aa22.41■■□□□ 1.18
LMBR1-219ENST00000498034 DENND4AQ7Z401 1863 aa22.41■■□□□ 1.18
LMBR1-219ENST00000498034 GLUD1P00367 558 aa22.4■■□□□ 1.18
LMBR1-219ENST00000498034 THP07101 528 aa22.4■■□□□ 1.18
LMBR1-219ENST00000498034 ASGR2P07307 311 aa22.4■■□□□ 1.18
LMBR1-219ENST00000498034 SPATA31D3P0C874 917 aa22.4■■□□□ 1.18
LMBR1-219ENST00000498034 GJB2P29033 226 aa22.4■■□□□ 1.18
LMBR1-219ENST00000498034 EFNA5P52803 228 aa22.4■■□□□ 1.18
LMBR1-219ENST00000498034 HSP90AA2PQ14568 343 aaPredicted RBP22.4■■□□□ 1.18
LMBR1-219ENST00000498034 SPATA31D4Q6ZUB0 917 aa22.4■■□□□ 1.18
LMBR1-219ENST00000498034 KCNK18Q7Z418 384 aa22.4■■□□□ 1.18
LMBR1-219ENST00000498034 PALB2Q86YC2 1186 aa22.4■■□□□ 1.18
LMBR1-219ENST00000498034 GLYCTKQ8IVS8 523 aa22.4■■□□□ 1.18
LMBR1-219ENST00000498034 SUGP1Q8IWZ8 645 aaKnown RBP22.4■■□□□ 1.18
LMBR1-219ENST00000498034 ZDHHC14Q8IZN3 488 aa22.4■■□□□ 1.18
LMBR1-219ENST00000498034 FBXL6Q8N531 539 aa22.4■■□□□ 1.18
LMBR1-219ENST00000498034 HASPINQ8TF76 798 aa22.4■■□□□ 1.18
LMBR1-219ENST00000498034 RIN2Q8WYP3 895 aaPredicted RBP22.4■■□□□ 1.18
LMBR1-219ENST00000498034 MMTAG2Q9BU76 263 aaKnown RBP22.4■■□□□ 1.18
LMBR1-219ENST00000498034 SMOC2Q9H3U7 446 aa22.4■■□□□ 1.18
LMBR1-219ENST00000498034 USTQ9Y2C2 406 aa22.4■■□□□ 1.18
LMBR1-219ENST00000498034 TRIOO75962 3097 aa22.4■■□□□ 1.18
LMBR1-219ENST00000498034 ZNF318Q5VUA4 2279 aa22.4■■□□□ 1.18
LMBR1-219ENST00000498034 K7ERI5 159 aa22.39■■□□□ 1.17
LMBR1-219ENST00000498034 BRD1O95696 1058 aa22.39■■□□□ 1.17
LMBR1-219ENST00000498034 RPL17P18621 184 aaKnown RBP22.39■■□□□ 1.17
LMBR1-219ENST00000498034 PEX3P56589 373 aa22.39■■□□□ 1.17
LMBR1-219ENST00000498034 RILPL1Q5EBL4 403 aa22.39■■□□□ 1.17
LMBR1-219ENST00000498034 IER5LQ5T953 404 aa22.39■■□□□ 1.17
LMBR1-219ENST00000498034 ATF7IP2Q5U623 682 aa22.39■■□□□ 1.17
LMBR1-219ENST00000498034 C15orf39Q6ZRI6 1047 aa22.39■■□□□ 1.17
LMBR1-219ENST00000498034 CCDC149Q6ZUS6 474 aa22.39■■□□□ 1.17
LMBR1-219ENST00000498034 PLCD3Q8N3E9 789 aa22.39■■□□□ 1.17
LMBR1-219ENST00000498034 RUSC1Q9BVN2 902 aa22.39■■□□□ 1.17
LMBR1-219ENST00000498034 CCDC195A0A1B0GUA6 201 aa22.38■■□□□ 1.17
LMBR1-219ENST00000498034 CCDC169A6NNP5 214 aa22.38■■□□□ 1.17
LMBR1-219ENST00000498034 HIP1RO75146 1068 aa22.38■■□□□ 1.17
LMBR1-219ENST00000498034 RFPL2O75678 378 aa22.38■■□□□ 1.17
LMBR1-219ENST00000498034 NPTX2P47972 431 aa22.38■■□□□ 1.17
LMBR1-219ENST00000498034 MTMR3Q13615 1198 aa22.38■■□□□ 1.17
LMBR1-219ENST00000498034 ZRSR1Q15695 479 aaKnown RBP22.38■■□□□ 1.17
LMBR1-219ENST00000498034 NAB2Q15742 525 aa22.38■■□□□ 1.17
LMBR1-219ENST00000498034 DCAF4L1Q3SXM0 396 aa22.38■■□□□ 1.17
LMBR1-219ENST00000498034 RINT1Q6NUQ1 792 aa22.38■■□□□ 1.17
LMBR1-219ENST00000498034 PRSS55Q6UWB4 352 aaPredicted RBP22.38■■□□□ 1.17
LMBR1-219ENST00000498034 DAW1Q8N136 415 aa22.38■■□□□ 1.17
LMBR1-219ENST00000498034 CMASQ8NFW8 434 aaPredicted RBP22.38■■□□□ 1.17
LMBR1-219ENST00000498034 H3BQV1 296 aa22.37■■□□□ 1.17
LMBR1-219ENST00000498034 KIF4AO95239 1232 aa22.37■■□□□ 1.17
LMBR1-219ENST00000498034 PDGFBP01127 241 aaPredicted RBP22.37■■□□□ 1.17
LMBR1-219ENST00000498034 ATP2C1P98194 919 aaPredicted RBP22.37■■□□□ 1.17
LMBR1-219ENST00000498034 NHLH1Q02575 133 aa22.37■■□□□ 1.17
LMBR1-219ENST00000498034 RTP2Q5QGT7 225 aa22.37■■□□□ 1.17
LMBR1-219ENST00000498034 C1orf186Q6ZWK4 172 aa22.37■■□□□ 1.17
LMBR1-219ENST00000498034 ACSF2Q96CM8 615 aaPredicted RBP22.37■■□□□ 1.17
LMBR1-219ENST00000498034 UPF2Q9HAU5 1272 aaKnown RBP22.37■■□□□ 1.17
LMBR1-219ENST00000498034 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.37■■□□□ 1.17
LMBR1-219ENST00000498034 FNIP2Q9P278 1114 aa22.37■■□□□ 1.17
LMBR1-219ENST00000498034 DPP7Q9UHL4 492 aa22.37■■□□□ 1.17
LMBR1-219ENST00000498034 SF3B1O75533 1304 aaKnown RBP eCLIP22.36■■□□□ 1.173e-9■■■■■ 206.8
LMBR1-219ENST00000498034 TGM5O43548 720 aa22.36■■□□□ 1.17
LMBR1-219ENST00000498034 VCPP55072 806 aaKnown RBP22.36■■□□□ 1.17
LMBR1-219ENST00000498034 MAPK7Q13164 816 aa22.36■■□□□ 1.17
LMBR1-219ENST00000498034 GLRA4Q5JXX5 417 aa22.36■■□□□ 1.17
LMBR1-219ENST00000498034 OTOP3Q7RTS5 596 aa22.36■■□□□ 1.17
LMBR1-219ENST00000498034 TAS1R3Q7RTX0 852 aa22.36■■□□□ 1.17
LMBR1-219ENST00000498034 CEP57Q86XR8 500 aa22.36■■□□□ 1.17
LMBR1-219ENST00000498034 GPR65Q8IYL9 337 aa22.36■■□□□ 1.17
LMBR1-219ENST00000498034 UBALD2Q8IYN6 164 aa22.36■■□□□ 1.17
LMBR1-219ENST00000498034 PRSS33Q8NF86 280 aa22.36■■□□□ 1.17
LMBR1-219ENST00000498034 PNMA5Q96PV4 448 aa22.36■■□□□ 1.17
LMBR1-219ENST00000498034 PLIN2Q99541 437 aa22.36■■□□□ 1.17
LMBR1-219ENST00000498034 TNFSF13BQ9Y275 285 aa22.36■■□□□ 1.17
LMBR1-219ENST00000498034 MUC6Q6W4X9 2439 aa22.36■■□□□ 1.17
LMBR1-219ENST00000498034 PHLPP2Q6ZVD8 1323 aa22.35■■□□□ 1.17
LMBR1-219ENST00000498034 KMT2EQ8IZD2 1858 aa22.35■■□□□ 1.17
LMBR1-219ENST00000498034 SFI1A8K8P3 1242 aa22.35■■□□□ 1.17
LMBR1-219ENST00000498034 DMP1Q13316 513 aaPredicted RBP22.35■■□□□ 1.17
LMBR1-219ENST00000498034 FAM171A1Q5VUB5 890 aa22.35■■□□□ 1.17
LMBR1-219ENST00000498034 LILRA6Q6PI73 481 aa22.35■■□□□ 1.17
LMBR1-219ENST00000498034 ELMSAN1Q6PJG2 1045 aa22.35■■□□□ 1.17
LMBR1-219ENST00000498034 ALYREFQ86V81 257 aaKnown RBP22.35■■□□□ 1.17
LMBR1-219ENST00000498034 CEP120Q8N960 986 aa22.35■■□□□ 1.17
LMBR1-219ENST00000498034 ACO2Q99798 780 aaKnown RBP22.35■■□□□ 1.17
LMBR1-219ENST00000498034 TMEM134Q9H6X4 195 aa22.35■■□□□ 1.17
LMBR1-219ENST00000498034 KMT5AQ9NQR1 393 aa22.35■■□□□ 1.17
LMBR1-219ENST00000498034 MTCL1Q9Y4B5 1905 aaKnown RBP22.35■■□□□ 1.17
LMBR1-219ENST00000498034 VWA3AA6NCI4 1184 aa22.34■■□□□ 1.17
LMBR1-219ENST00000498034 IGFBP6P24592 240 aaPredicted RBP22.34■■□□□ 1.17
LMBR1-219ENST00000498034 CREMQ03060 361 aa22.34■■□□□ 1.17
LMBR1-219ENST00000498034 RAD51AP2Q09MP3 1159 aa22.34■■□□□ 1.17
LMBR1-219ENST00000498034 HDAC7Q8WUI4 952 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms