RNA–Protein interactions for RNA: ENST00000497873.1

PAXBP1-209, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 2

Gene PAXBP1, Length 2,277 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-209ENST00000497873 SCLT1Q96NL6 688 aa7.45□□□□□ -1.22
PAXBP1-209ENST00000497873 GPRC5BQ9NZH0 403 aa7.45□□□□□ -1.22
PAXBP1-209ENST00000497873 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.45□□□□□ -1.22
PAXBP1-209ENST00000497873 DNAI1Q9UI46 699 aa7.45□□□□□ -1.22
PAXBP1-209ENST00000497873 C9orf84Q5VXU9 1444 aa7.45□□□□□ -1.22
PAXBP1-209ENST00000497873 CD109Q6YHK3 1445 aa7.45□□□□□ -1.22
PAXBP1-209ENST00000497873 FAM171A2A8MVW0 826 aa7.44□□□□□ -1.22
PAXBP1-209ENST00000497873 SLC16A6O15403 523 aa7.44□□□□□ -1.22
PAXBP1-209ENST00000497873 TMEM127O75204 238 aa7.44□□□□□ -1.22
PAXBP1-209ENST00000497873 ABCB4P21439 1286 aa7.44□□□□□ -1.22
PAXBP1-209ENST00000497873 CASP5P51878 434 aa7.44□□□□□ -1.22
PAXBP1-209ENST00000497873 HK3P52790 923 aa7.44□□□□□ -1.22
PAXBP1-209ENST00000497873 BTKQ06187 659 aa7.44□□□□□ -1.22
PAXBP1-209ENST00000497873 TP53INP2Q8IXH6 220 aa7.44□□□□□ -1.22
PAXBP1-209ENST00000497873 SLC35A4Q96G79 324 aa7.44□□□□□ -1.22
PAXBP1-209ENST00000497873 INTS4Q96HW7 963 aaKnown RBP7.44□□□□□ -1.22
PAXBP1-209ENST00000497873 SELENOOQ9BVL4 669 aa7.44□□□□□ -1.22
PAXBP1-209ENST00000497873 WDR12Q9GZL7 423 aaKnown RBP7.44□□□□□ -1.22
PAXBP1-209ENST00000497873 DLL4Q9NR61 685 aa7.44□□□□□ -1.22
PAXBP1-209ENST00000497873 LRCH1Q9Y2L9 728 aa7.44□□□□□ -1.22
PAXBP1-209ENST00000497873 SYN1P17600 705 aa7.44□□□□□ -1.22
PAXBP1-209ENST00000497873 TYRP1P17643 537 aa7.44□□□□□ -1.22
PAXBP1-209ENST00000497873 ZNF200P98182 395 aaPredicted RBP7.44□□□□□ -1.22
PAXBP1-209ENST00000497873 FGL2Q14314 439 aa7.44□□□□□ -1.22
PAXBP1-209ENST00000497873 STILQ15468 1287 aa7.44□□□□□ -1.22
PAXBP1-209ENST00000497873 CCDC174Q6PII3 467 aa7.44□□□□□ -1.22
PAXBP1-209ENST00000497873 FAM180AQ6UWF9 173 aa7.44□□□□□ -1.22
PAXBP1-209ENST00000497873 C3orf20Q8ND61 904 aa7.44□□□□□ -1.22
PAXBP1-209ENST00000497873 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.44□□□□□ -1.22
PAXBP1-209ENST00000497873 DMRTA2Q96SC8 542 aa7.44□□□□□ -1.22
PAXBP1-209ENST00000497873 NAP1L4Q99733 375 aaKnown RBP7.44□□□□□ -1.22
PAXBP1-209ENST00000497873 VRK1Q99986 396 aaPredicted RBP7.44□□□□□ -1.22
PAXBP1-209ENST00000497873 LRRC27Q9C0I9 530 aa7.44□□□□□ -1.22
PAXBP1-209ENST00000497873 CERS4Q9HA82 394 aa7.44□□□□□ -1.22
PAXBP1-209ENST00000497873 NGRNQ9NPE2 291 aaKnown RBP7.44□□□□□ -1.22
PAXBP1-209ENST00000497873 LMBRD1Q9NUN5 540 aa7.44□□□□□ -1.22
PAXBP1-209ENST00000497873 TDP1Q9NUW8 608 aa7.44□□□□□ -1.22
PAXBP1-209ENST00000497873 ZFP69BQ9UJL9 534 aa7.44□□□□□ -1.22
PAXBP1-209ENST00000497873 ARHGEF12Q9NZN5 1544 aa7.44□□□□□ -1.22
PAXBP1-209ENST00000497873 CTSSP25774 331 aa7.43□□□□□ -1.22
PAXBP1-209ENST00000497873 FAM209BQ5JX69 171 aa7.43□□□□□ -1.22
PAXBP1-209ENST00000497873 ZFYVE27Q5T4F4 411 aa7.43□□□□□ -1.22
PAXBP1-209ENST00000497873 ABHD15Q6UXT9 468 aa7.43□□□□□ -1.22
PAXBP1-209ENST00000497873 STK32CQ86UX6 486 aa7.43□□□□□ -1.22
PAXBP1-209ENST00000497873 STPG3Q8N7X2 389 aa7.43□□□□□ -1.22
PAXBP1-209ENST00000497873 NEO1Q92859 1461 aa7.43□□□□□ -1.22
PAXBP1-209ENST00000497873 HAPLN2Q9GZV7 340 aa7.43□□□□□ -1.22
PAXBP1-209ENST00000497873 SYCP2Q9BX26 1530 aa7.43□□□□□ -1.22
PAXBP1-209ENST00000497873 USP19O94966 1318 aa7.43□□□□□ -1.22
PAXBP1-209ENST00000497873 N4BP3O15049 544 aa7.43□□□□□ -1.22
PAXBP1-209ENST00000497873 SPINK2P20155 84 aa7.43□□□□□ -1.22
PAXBP1-209ENST00000497873 ADCY8P40145 1251 aa7.43□□□□□ -1.22
PAXBP1-209ENST00000497873 IL6STP40189 918 aaPredicted RBP7.43□□□□□ -1.22
PAXBP1-209ENST00000497873 NKX6-1P78426 367 aaPredicted RBP7.43□□□□□ -1.22
PAXBP1-209ENST00000497873 PLS1Q14651 629 aa7.43□□□□□ -1.22
PAXBP1-209ENST00000497873 KHDC1Q4VXA5 237 aaKnown RBP7.43□□□□□ -1.22
PAXBP1-209ENST00000497873 HEATR3Q7Z4Q2 680 aa7.43□□□□□ -1.22
PAXBP1-209ENST00000497873 ZNF354CQ86Y25 554 aa7.43□□□□□ -1.22
PAXBP1-209ENST00000497873 PAF1Q8N7H5 531 aa7.43□□□□□ -1.22
PAXBP1-209ENST00000497873 SEMA6BQ9H3T3 888 aa7.43□□□□□ -1.22
PAXBP1-209ENST00000497873 DENND4BO75064 1496 aaPredicted RBP7.42□□□□□ -1.22
PAXBP1-209ENST00000497873 RPTORQ8N122 1335 aa7.42□□□□□ -1.22
PAXBP1-209ENST00000497873 C8BP07358 591 aa7.42□□□□□ -1.22
PAXBP1-209ENST00000497873 TSPY4P0CV99 314 aa7.42□□□□□ -1.22
PAXBP1-209ENST00000497873 TSPY10P0CW01 314 aa7.42□□□□□ -1.22
PAXBP1-209ENST00000497873 KITP10721 976 aa7.42□□□□□ -1.22
PAXBP1-209ENST00000497873 PPM1AP35813 382 aa7.42□□□□□ -1.22
PAXBP1-209ENST00000497873 POU5F1BQ06416 359 aa7.42□□□□□ -1.22
PAXBP1-209ENST00000497873 TMEM62Q0P6H9 643 aa7.42□□□□□ -1.22
PAXBP1-209ENST00000497873 MAP3K12Q12852 859 aa7.42□□□□□ -1.22
PAXBP1-209ENST00000497873 IL31RAQ8NI17 732 aa7.42□□□□□ -1.22
PAXBP1-209ENST00000497873 PAWRQ96IZ0 340 aaKnown RBP7.42□□□□□ -1.22
PAXBP1-209ENST00000497873 BTBD1Q9H0C5 482 aa7.42□□□□□ -1.22
PAXBP1-209ENST00000497873 KIAA1586Q9HCI6 787 aa7.42□□□□□ -1.22
PAXBP1-209ENST00000497873 POLR3BQ9NW08 1133 aaPredicted RBP7.42□□□□□ -1.22
PAXBP1-209ENST00000497873 STK17AQ9UEE5 414 aa7.42□□□□□ -1.22
PAXBP1-209ENST00000497873 ABCF2Q9UG63 623 aa7.42□□□□□ -1.22
PAXBP1-209ENST00000497873 OR14I1A6ND48 311 aa7.41□□□□□ -1.22
PAXBP1-209ENST00000497873 LRRC10BA6NIK2 292 aa7.41□□□□□ -1.22
PAXBP1-209ENST00000497873 PRAMEF4O60810 478 aa7.41□□□□□ -1.22
PAXBP1-209ENST00000497873 LY86O95711 162 aa7.41□□□□□ -1.22
PAXBP1-209ENST00000497873 STT3AP46977 705 aa7.41□□□□□ -1.22
PAXBP1-209ENST00000497873 SLC6A9P48067 706 aa7.41□□□□□ -1.22
PAXBP1-209ENST00000497873 CDC42EP1Q00587 391 aa7.41□□□□□ -1.22
PAXBP1-209ENST00000497873 ZNF543Q08ER8 600 aa7.41□□□□□ -1.22
PAXBP1-209ENST00000497873 TARDBPQ13148 414 aaKnown RBP eCLIP7.41□□□□□ -1.22
PAXBP1-209ENST00000497873 ZNF792Q3KQV3 632 aa7.41□□□□□ -1.22
PAXBP1-209ENST00000497873 FYB2Q5VWT5 728 aa7.41□□□□□ -1.22
PAXBP1-209ENST00000497873 GRAMD4Q6IC98 578 aa7.41□□□□□ -1.22
PAXBP1-209ENST00000497873 Q6ZVL8 140 aa7.41□□□□□ -1.22
PAXBP1-209ENST00000497873 LIX1LQ8IVB5 337 aa7.41□□□□□ -1.22
PAXBP1-209ENST00000497873 PPP1R14CQ8TAE6 165 aa7.41□□□□□ -1.22
PAXBP1-209ENST00000497873 HOXB13Q92826 284 aaPredicted RBP7.41□□□□□ -1.22
PAXBP1-209ENST00000497873 ZSWIM3Q96MP5 696 aa7.41□□□□□ -1.22
PAXBP1-209ENST00000497873 PTPN18Q99952 460 aa7.41□□□□□ -1.22
PAXBP1-209ENST00000497873 CPA4Q9UI42 421 aa7.41□□□□□ -1.22
PAXBP1-209ENST00000497873 SIK3Q9Y2K2 1263 aa7.41□□□□□ -1.22
PAXBP1-209ENST00000497873 UNC13BO14795 1591 aa7.41□□□□□ -1.22
PAXBP1-209ENST00000497873 DUOX2Q9NRD8 1548 aa7.41□□□□□ -1.22
PAXBP1-209ENST00000497873 FANCAO15360 1455 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms