RNA–Protein interactions for RNA: ENST00000497849.1

VIM-208, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-208ENST00000497849 BICD2Q8TD16 824 aa18.38■□□□□ 0.53
VIM-208ENST00000497849 CPB2Q96IY4 423 aa18.38■□□□□ 0.53
VIM-208ENST00000497849 APOL6Q9BWW8 343 aa18.38■□□□□ 0.53
VIM-208ENST00000497849 BMP2KQ9NSY1 1161 aaPredicted RBP18.38■□□□□ 0.53
VIM-208ENST00000497849 HCFC1R1Q9NWW0 138 aa18.38■□□□□ 0.53
VIM-208ENST00000497849 POLIQ9UNA4 740 aa18.38■□□□□ 0.53
VIM-208ENST00000497849 GIT1Q9Y2X7 761 aa18.38■□□□□ 0.53
VIM-208ENST00000497849 FRYQ5TBA9 3013 aa18.38■□□□□ 0.53
VIM-208ENST00000497849 VWA8A3KMH1 1905 aa18.37■□□□□ 0.53
VIM-208ENST00000497849 EML1O00423 815 aa18.37■□□□□ 0.53
VIM-208ENST00000497849 ADAM12O43184 909 aa18.37■□□□□ 0.53
VIM-208ENST00000497849 ADCK5Q3MIX3 580 aa18.37■□□□□ 0.53
VIM-208ENST00000497849 CELF5Q8N6W0 485 aaKnown RBP18.37■□□□□ 0.53
VIM-208ENST00000497849 LNX1Q8TBB1 728 aaPredicted RBP18.37■□□□□ 0.53
VIM-208ENST00000497849 ETNPPLQ8TBG4 499 aa18.37■□□□□ 0.53
VIM-208ENST00000497849 TBCKQ8TEA7 893 aa18.37■□□□□ 0.53
VIM-208ENST00000497849 PAAF1Q9BRP4 392 aa18.37■□□□□ 0.53
VIM-208ENST00000497849 CSRNP2Q9H175 543 aa18.37■□□□□ 0.53
VIM-208ENST00000497849 NXF3Q9H4D5 531 aaKnown RBP18.37■□□□□ 0.53
VIM-208ENST00000497849 ANO2Q9NQ90 1003 aa18.37■□□□□ 0.53
VIM-208ENST00000497849 WRAP73Q9P2S5 460 aaPredicted RBP18.37■□□□□ 0.53
VIM-208ENST00000497849 CEP295Q9C0D2 2601 aa18.36■□□□□ 0.53
VIM-208ENST00000497849 CYP3A7-CYP3A51PA0A087WV96 503 aa18.36■□□□□ 0.53
VIM-208ENST00000497849 LRP3O75074 770 aa18.36■□□□□ 0.53
VIM-208ENST00000497849 TADA2AO75478 443 aa18.36■□□□□ 0.53
VIM-208ENST00000497849 ECI2O75521 394 aa18.36■□□□□ 0.53
VIM-208ENST00000497849 ERLIN2O94905 339 aa18.36■□□□□ 0.53
VIM-208ENST00000497849 RETP07949 1114 aa18.36■□□□□ 0.53
VIM-208ENST00000497849 CYP3A7P24462 503 aa18.36■□□□□ 0.53
VIM-208ENST00000497849 AKAP5P24588 427 aa18.36■□□□□ 0.53
VIM-208ENST00000497849 AXLP30530 894 aa18.36■□□□□ 0.53
VIM-208ENST00000497849 ARID2Q68CP9 1835 aa18.36■□□□□ 0.53
VIM-208ENST00000497849 NOTUMQ6P988 496 aa18.36■□□□□ 0.53
VIM-208ENST00000497849 MAMSTRQ6ZN01 415 aa18.36■□□□□ 0.53
VIM-208ENST00000497849 CENPQQ7L2Z9 268 aaPredicted RBP18.36■□□□□ 0.53
VIM-208ENST00000497849 FERMT3Q86UX7 667 aa18.36■□□□□ 0.53
VIM-208ENST00000497849 RASEFQ8IZ41 740 aa18.36■□□□□ 0.53
VIM-208ENST00000497849 ING5Q8WYH8 240 aa18.36■□□□□ 0.53
VIM-208ENST00000497849 PIK3R5Q8WYR1 880 aa18.36■□□□□ 0.53
VIM-208ENST00000497849 CCDC51Q96ER9 411 aa18.36■□□□□ 0.53
VIM-208ENST00000497849 CEP170P1Q96L14 293 aa18.36■□□□□ 0.53
VIM-208ENST00000497849 CHRDQ9H2X0 955 aa18.36■□□□□ 0.53
VIM-208ENST00000497849 SEMA4GQ9NTN9 838 aa18.36■□□□□ 0.53
VIM-208ENST00000497849 VPS54Q9P1Q0 977 aa18.36■□□□□ 0.53
VIM-208ENST00000497849 DNMT3BQ9UBC3 853 aaKnown RBP18.36■□□□□ 0.53
VIM-208ENST00000497849 RAB23Q9ULC3 237 aa18.36■□□□□ 0.53
VIM-208ENST00000497849 NAP1L2Q9ULW6 460 aaPredicted RBP18.36■□□□□ 0.53
VIM-208ENST00000497849 MRPS17Q9Y2R5 130 aaKnown RBP18.36■□□□□ 0.53
VIM-208ENST00000497849 COL4A2P08572 1712 aa18.35■□□□□ 0.53
VIM-208ENST00000497849 SF3B1O75533 1304 aaKnown RBP eCLIP18.35■□□□□ 0.53
VIM-208ENST00000497849 CCDC196A0A1B0GTZ2 297 aa18.35■□□□□ 0.53
VIM-208ENST00000497849 GDF9O60383 454 aa18.35■□□□□ 0.53
VIM-208ENST00000497849 XYLBO75191 536 aa18.35■□□□□ 0.53
VIM-208ENST00000497849 POU2F2P09086 479 aa18.35■□□□□ 0.53
VIM-208ENST00000497849 QARSP47897 775 aaKnown RBP18.35■□□□□ 0.53
VIM-208ENST00000497849 GRIK3Q13003 919 aa18.35■□□□□ 0.53
VIM-208ENST00000497849 HSP90AA2PQ14568 343 aaPredicted RBP18.35■□□□□ 0.53
VIM-208ENST00000497849 PSMD5Q16401 504 aa18.35■□□□□ 0.53
VIM-208ENST00000497849 PRR23CQ6ZRP0 262 aa18.35■□□□□ 0.53
VIM-208ENST00000497849 CCDC148Q8NFR7 591 aa18.35■□□□□ 0.53
VIM-208ENST00000497849 SLC7A14Q8TBB6 771 aa18.35■□□□□ 0.53
VIM-208ENST00000497849 HASPINQ8TF76 798 aa18.35■□□□□ 0.53
VIM-208ENST00000497849 TTPALQ9BTX7 342 aa18.35■□□□□ 0.53
VIM-208ENST00000497849 KCNH3Q9ULD8 1083 aa18.35■□□□□ 0.53
VIM-208ENST00000497849 ASAP2O43150 1006 aa18.34■□□□□ 0.53
VIM-208ENST00000497849 RFC5P40937 340 aa18.34■□□□□ 0.53
VIM-208ENST00000497849 NRLP54845 237 aa18.34■□□□□ 0.53
VIM-208ENST00000497849 PTENP60484 403 aa18.34■□□□□ 0.53
VIM-208ENST00000497849 PCBP1Q15365 356 aaKnown RBP eCLIP18.34■□□□□ 0.53
VIM-208ENST00000497849 NTRK3Q16288 839 aa18.34■□□□□ 0.53
VIM-208ENST00000497849 CSRP2Q16527 193 aa18.34■□□□□ 0.53
VIM-208ENST00000497849 AMHR2Q16671 573 aa18.34■□□□□ 0.53
VIM-208ENST00000497849 PABPC1LQ4VXU2 614 aaKnown RBP18.34■□□□□ 0.53
VIM-208ENST00000497849 AXDND1Q5T1B0 1012 aaPredicted RBP18.34■□□□□ 0.53
VIM-208ENST00000497849 RNF20Q5VTR2 975 aa18.34■□□□□ 0.53
VIM-208ENST00000497849 PRR23BQ6ZRT6 265 aa18.34■□□□□ 0.53
VIM-208ENST00000497849 EXOC8Q8IYI6 725 aa18.34■□□□□ 0.53
VIM-208ENST00000497849 MCRS1Q96EZ8 462 aa18.34■□□□□ 0.53
VIM-208ENST00000497849 KLK14Q9P0G3 267 aa18.34■□□□□ 0.53
VIM-208ENST00000497849 ANGPTL2Q9UKU9 493 aa18.34■□□□□ 0.53
VIM-208ENST00000497849 NDRG2Q9UN36 371 aaKnown RBP18.34■□□□□ 0.53
VIM-208ENST00000497849 PPME1Q9Y570 386 aa18.34■□□□□ 0.53
VIM-208ENST00000497849 NID2Q14112 1375 aa18.33■□□□□ 0.53
VIM-208ENST00000497849 ASPMQ8IZT6 3477 aa18.33■□□□□ 0.52
VIM-208ENST00000497849 ARF4P18085 180 aaPredicted RBP18.33■□□□□ 0.52
VIM-208ENST00000497849 PMLP29590 882 aa18.33■□□□□ 0.52
VIM-208ENST00000497849 EMC2Q15006 297 aa18.33■□□□□ 0.52
VIM-208ENST00000497849 SLC5A9Q2M3M2 681 aa18.33■□□□□ 0.52
VIM-208ENST00000497849 FAM171A1Q5VUB5 890 aa18.33■□□□□ 0.52
VIM-208ENST00000497849 TANGO2Q6ICL3 276 aa18.33■□□□□ 0.52
VIM-208ENST00000497849 CEP57Q86XR8 500 aa18.33■□□□□ 0.52
VIM-208ENST00000497849 TCP11Q8WWU5 503 aa18.33■□□□□ 0.52
VIM-208ENST00000497849 DNASE1L2Q92874 299 aa18.33■□□□□ 0.52
VIM-208ENST00000497849 VAV3Q9UKW4 847 aa18.33■□□□□ 0.52
VIM-208ENST00000497849 TICRRQ7Z2Z1 1910 aa18.32■□□□□ 0.52
VIM-208ENST00000497849 INO80B-WBP1J3KQ70 363 aa18.32■□□□□ 0.52
VIM-208ENST00000497849 KIF4AO95239 1232 aa18.32■□□□□ 0.52
VIM-208ENST00000497849 MBTD1Q05BQ5 628 aa18.32■□□□□ 0.52
VIM-208ENST00000497849 COL9A2Q14055 689 aaPredicted RBP18.32■□□□□ 0.52
VIM-208ENST00000497849 UVSSAQ2YD98 709 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms