RNA–Protein interactions for RNA: ENST00000497368.1

UBE3C-208, Transcript of ubiquitin protein ligase E3C, human

TSL 2

Gene UBE3C, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3C-208	ENST00000497368	TRAF1	Q13077	416 aa		6.27	□□□□□ -1.41
UBE3C-208	ENST00000497368	CEP55	Q53EZ4	464 aa		6.27	□□□□□ -1.41
UBE3C-208	ENST00000497368	TCEAL5	Q5H9L2	206 aa		6.27	□□□□□ -1.41
UBE3C-208	ENST00000497368	JAKMIP3	Q5VZ66	844 aa		6.27	□□□□□ -1.41
UBE3C-208	ENST00000497368	TSHZ1	Q6ZSZ6	1077 aa		6.27	□□□□□ -1.41
UBE3C-208	ENST00000497368		Q6ZUG5	572 aa		6.27	□□□□□ -1.41
UBE3C-208	ENST00000497368	ADGRD2	Q7Z7M1	963 aa		6.27	□□□□□ -1.41
UBE3C-208	ENST00000497368	NLRX1	Q86UT6	975 aa		6.27	□□□□□ -1.41
UBE3C-208	ENST00000497368	CACTIN-AS1	Q8N1I8	211 aa		6.27	□□□□□ -1.41
UBE3C-208	ENST00000497368	FEZF2	Q8TBJ5	459 aa		6.27	□□□□□ -1.41
UBE3C-208	ENST00000497368	NEK9	Q8TD19	979 aa		6.27	□□□□□ -1.41
UBE3C-208	ENST00000497368	WFDC12	Q8WWY7	111 aa		6.27	□□□□□ -1.41
UBE3C-208	ENST00000497368	SEPT1	Q8WYJ6	367 aa		6.27	□□□□□ -1.41
UBE3C-208	ENST00000497368	SEPT8	Q92599	483 aa		6.27	□□□□□ -1.41
UBE3C-208	ENST00000497368	BRF1	Q92994	677 aa		6.27	□□□□□ -1.41
UBE3C-208	ENST00000497368	CUL5	Q93034	780 aa		6.27	□□□□□ -1.41
UBE3C-208	ENST00000497368	OSMR	Q99650	979 aa		6.27	□□□□□ -1.41
UBE3C-208	ENST00000497368	ADAM19	Q9H013	955 aa		6.27	□□□□□ -1.41
UBE3C-208	ENST00000497368	ZMYND12	Q9H0C1	365 aa		6.27	□□□□□ -1.41
UBE3C-208	ENST00000497368	FAM49A	Q9H0Q0	323 aa	Predicted RBP	6.27	□□□□□ -1.41
UBE3C-208	ENST00000497368	MUC3B	Q9H195	1237 aa		6.27	□□□□□ -1.41
UBE3C-208	ENST00000497368	EPHX3	Q9H6B9	360 aa		6.27	□□□□□ -1.41
UBE3C-208	ENST00000497368	ERVK-5	Q9HDB9	667 aa		6.27	□□□□□ -1.41
UBE3C-208	ENST00000497368	RBM28	Q9NW13	759 aa	Known RBP	6.27	□□□□□ -1.41
UBE3C-208	ENST00000497368	ERAP1	Q9NZ08	941 aa		6.27	□□□□□ -1.41
UBE3C-208	ENST00000497368	LMCD1	Q9NZU5	365 aa		6.27	□□□□□ -1.41
UBE3C-208	ENST00000497368	SLC9A2	Q9UBY0	812 aa		6.27	□□□□□ -1.41
UBE3C-208	ENST00000497368	ZNF215	Q9UL58	517 aa	Predicted RBP	6.27	□□□□□ -1.41
UBE3C-208	ENST00000497368	MRPL42	Q9Y6G3	142 aa	Known RBP	6.27	□□□□□ -1.41
UBE3C-208	ENST00000497368	TMEM150B	A6NC51	233 aa		6.26	□□□□□ -1.41
UBE3C-208	ENST00000497368	SMCO2	A6NFE2	343 aa		6.26	□□□□□ -1.41
UBE3C-208	ENST00000497368	ENPP3	O14638	875 aa		6.26	□□□□□ -1.41
UBE3C-208	ENST00000497368	EFCAB14	O75071	495 aa		6.26	□□□□□ -1.41
UBE3C-208	ENST00000497368	DGKI	O75912	1065 aa		6.26	□□□□□ -1.41
UBE3C-208	ENST00000497368	ALX3	O95076	343 aa		6.26	□□□□□ -1.41
UBE3C-208	ENST00000497368	LARGE1	O95461	756 aa		6.26	□□□□□ -1.41
UBE3C-208	ENST00000497368	AMH	P03971	560 aa		6.26	□□□□□ -1.41
UBE3C-208	ENST00000497368	SCG2	P13521	617 aa		6.26	□□□□□ -1.41
UBE3C-208	ENST00000497368	ATF7	P17544	494 aa	Predicted RBP	6.26	□□□□□ -1.41
UBE3C-208	ENST00000497368	ITGB7	P26010	798 aa		6.26	□□□□□ -1.41
UBE3C-208	ENST00000497368	CIITA	P33076	1130 aa		6.26	□□□□□ -1.41
UBE3C-208	ENST00000497368	HYAL1	Q12794	435 aa		6.26	□□□□□ -1.41
UBE3C-208	ENST00000497368	AP3B2	Q13367	1082 aa		6.26	□□□□□ -1.41
UBE3C-208	ENST00000497368	DRP2	Q13474	957 aa		6.26	□□□□□ -1.41
UBE3C-208	ENST00000497368	DSC3	Q14574	896 aa		6.26	□□□□□ -1.41
UBE3C-208	ENST00000497368	TMEM266	Q2M3C6	531 aa		6.26	□□□□□ -1.41
UBE3C-208	ENST00000497368	LEXM	Q3ZCV2	418 aa		6.26	□□□□□ -1.41
UBE3C-208	ENST00000497368	NKAPL	Q5M9Q1	402 aa		6.26	□□□□□ -1.41
UBE3C-208	ENST00000497368	TAF2	Q6P1X5	1199 aa		6.26	□□□□□ -1.41
UBE3C-208	ENST00000497368	MTHFD1L	Q6UB35	978 aa		6.26	□□□□□ -1.41
UBE3C-208	ENST00000497368	NIPA1	Q7RTP0	329 aa		6.26	□□□□□ -1.41
UBE3C-208	ENST00000497368	FAM228A	Q86W67	206 aa		6.26	□□□□□ -1.41
UBE3C-208	ENST00000497368	MAP4K3	Q8IVH8	894 aa		6.26	□□□□□ -1.41
UBE3C-208	ENST00000497368	TMEM192	Q8IY95	271 aa		6.26	□□□□□ -1.41
UBE3C-208	ENST00000497368	TMTC2	Q8N394	836 aa		6.26	□□□□□ -1.41
UBE3C-208	ENST00000497368	VN1R2	Q8NFZ6	395 aa		6.26	□□□□□ -1.41
UBE3C-208	ENST00000497368	MRPL38	Q96DV4	380 aa	Known RBP	6.26	□□□□□ -1.41
UBE3C-208	ENST00000497368	JAKMIP1	Q96N16	626 aa	Known RBP	6.26	□□□□□ -1.41
UBE3C-208	ENST00000497368	MBOAT7	Q96N66	472 aa		6.26	□□□□□ -1.41
UBE3C-208	ENST00000497368	SRA1	Q9HD15	236 aa	Known RBP	6.26	□□□□□ -1.41
UBE3C-208	ENST00000497368	GJB4	Q9NTQ9	266 aa		6.26	□□□□□ -1.41
UBE3C-208	ENST00000497368	VPS54	Q9P1Q0	977 aa		6.26	□□□□□ -1.41
UBE3C-208	ENST00000497368	NOC2L	Q9Y3T9	749 aa	Known RBP	6.26	□□□□□ -1.41
UBE3C-208	ENST00000497368	INSL6	Q9Y581	213 aa		6.26	□□□□□ -1.41
UBE3C-208	ENST00000497368	PCDHA2	Q9Y5H9	948 aa		6.26	□□□□□ -1.41
UBE3C-208	ENST00000497368	TRPV2	Q9Y5S1	764 aa		6.26	□□□□□ -1.41
UBE3C-208	ENST00000497368	VWA8	A3KMH1	1905 aa		6.25	□□□□□ -1.41
UBE3C-208	ENST00000497368	TDRD15	B5MCY1	1934 aa	Known RBP	6.25	□□□□□ -1.41
UBE3C-208	ENST00000497368	SMIM35	A0A1B0GVV1	85 aa		6.25	□□□□□ -1.41
UBE3C-208	ENST00000497368	FAM86C2P	A6NEL3	165 aa		6.25	□□□□□ -1.41
UBE3C-208	ENST00000497368		H3BQ06	376 aa	Predicted RBP	6.25	□□□□□ -1.41
UBE3C-208	ENST00000497368	hCG_1984214	I3L0E3	225 aa		6.25	□□□□□ -1.41
UBE3C-208	ENST00000497368	TM4SF5	O14894	197 aa		6.25	□□□□□ -1.41
UBE3C-208	ENST00000497368	FSCN2	O14926	492 aa		6.25	□□□□□ -1.41
UBE3C-208	ENST00000497368	MSH4	O15457	936 aa		6.25	□□□□□ -1.41
UBE3C-208	ENST00000497368	PRPF3	O43395	683 aa	Known RBP	6.25	□□□□□ -1.41
UBE3C-208	ENST00000497368	NDUFB5	O43674	189 aa		6.25	□□□□□ -1.41
UBE3C-208	ENST00000497368	B4GALT3	O60512	393 aa		6.25	□□□□□ -1.41
UBE3C-208	ENST00000497368	GPR32	O75388	356 aa		6.25	□□□□□ -1.41
UBE3C-208	ENST00000497368	WISP1	O95388	367 aa		6.25	□□□□□ -1.41
UBE3C-208	ENST00000497368	CTDNEP1	O95476	244 aa		6.25	□□□□□ -1.41
UBE3C-208	ENST00000497368	TDP2	O95551	362 aa		6.25	□□□□□ -1.41
UBE3C-208	ENST00000497368	MMP1	P03956	469 aa		6.25	□□□□□ -1.41
UBE3C-208	ENST00000497368	ITGB1	P05556	798 aa		6.25	□□□□□ -1.41
UBE3C-208	ENST00000497368	EDN3	P14138	238 aa		6.25	□□□□□ -1.41
UBE3C-208	ENST00000497368	IFNAR1	P17181	557 aa		6.25	□□□□□ -1.41
UBE3C-208	ENST00000497368	PDIA3	P30101	505 aa	Known RBP	6.25	□□□□□ -1.41
UBE3C-208	ENST00000497368	METAP2	P50579	478 aa	Known RBP eCLIP	6.25	□□□□□ -1.41
UBE3C-208	ENST00000497368	RBM10	P98175	930 aa	Known RBP	6.25	□□□□□ -1.41
UBE3C-208	ENST00000497368	GPM6B	Q13491	265 aa		6.25	□□□□□ -1.41
UBE3C-208	ENST00000497368	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	6.25	□□□□□ -1.41
UBE3C-208	ENST00000497368	EARS2	Q5JPH6	523 aa	Known RBP	6.25	□□□□□ -1.41
UBE3C-208	ENST00000497368	FOXD4L3	Q6VB84	417 aa	Predicted RBP	6.25	□□□□□ -1.41
UBE3C-208	ENST00000497368	PLPPR4	Q7Z2D5	763 aa		6.25	□□□□□ -1.41
UBE3C-208	ENST00000497368	FAM178B	Q8IXR5	827 aa		6.25	□□□□□ -1.41
UBE3C-208	ENST00000497368	KIAA0319L	Q8IZA0	1049 aa		6.25	□□□□□ -1.41
UBE3C-208	ENST00000497368	AGGF1	Q8N302	714 aa	eCLIP	6.25	□□□□□ -1.41
UBE3C-208	ENST00000497368	ZNF713	Q8N859	430 aa	Predicted RBP	6.25	□□□□□ -1.41
UBE3C-208	ENST00000497368	TMEM102	Q8N9M5	508 aa	Predicted RBP	6.25	□□□□□ -1.41
UBE3C-208	ENST00000497368	GIMAP8	Q8ND71	665 aa	Predicted RBP	6.25	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms