RNA–Protein interactions for RNA: ENST00000496570.1

DNMT3A-215, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-215ENST00000496570 VN1R2Q8NFZ6 395 aa17.69■□□□□ 0.42
DNMT3A-215ENST00000496570 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.69■□□□□ 0.42
DNMT3A-215ENST00000496570 TMEM169Q96HH4 297 aa17.69■□□□□ 0.42
DNMT3A-215ENST00000496570 STRA6Q9BX79 667 aa17.69■□□□□ 0.42
DNMT3A-215ENST00000496570 IGFLR1Q9H665 355 aa17.69■□□□□ 0.42
DNMT3A-215ENST00000496570 CACNG4Q9UBN1 327 aa17.69■□□□□ 0.42
DNMT3A-215ENST00000496570 PUF60Q9UHX1 559 aaKnown RBP17.69■□□□□ 0.42
DNMT3A-215ENST00000496570 CFAP45Q9UL16 551 aa17.69■□□□□ 0.42
DNMT3A-215ENST00000496570 TBX20Q9UMR3 447 aa17.69■□□□□ 0.42
DNMT3A-215ENST00000496570 FAN1Q9Y2M0 1017 aa17.69■□□□□ 0.42
DNMT3A-215ENST00000496570 GDAQ9Y2T3 454 aa17.69■□□□□ 0.42
DNMT3A-215ENST00000496570 MUC3AQ02505 3323 aa17.69■□□□□ 0.42
DNMT3A-215ENST00000496570 CARNS1A5YM72 827 aa17.68■□□□□ 0.42
DNMT3A-215ENST00000496570 C2orf71A6NGG8 1288 aa17.68■□□□□ 0.42
DNMT3A-215ENST00000496570 K7ENM7 598 aa17.68■□□□□ 0.42
DNMT3A-215ENST00000496570 PER2O15055 1255 aa17.68■□□□□ 0.42
DNMT3A-215ENST00000496570 TBCAO75347 108 aaKnown RBP17.68■□□□□ 0.42
DNMT3A-215ENST00000496570 TOM1L1O75674 476 aa17.68■□□□□ 0.42
DNMT3A-215ENST00000496570 PPP1R37O75864 691 aa17.68■□□□□ 0.42
DNMT3A-215ENST00000496570 PIGRP01833 764 aa17.68■□□□□ 0.42
DNMT3A-215ENST00000496570 ALDH2P05091 517 aa17.68■□□□□ 0.42
DNMT3A-215ENST00000496570 STRN3Q13033 797 aa17.68■□□□□ 0.42
DNMT3A-215ENST00000496570 BECN1Q14457 450 aa17.68■□□□□ 0.42
DNMT3A-215ENST00000496570 DUSP6Q16828 381 aa17.68■□□□□ 0.42
DNMT3A-215ENST00000496570 LEXMQ3ZCV2 418 aa17.68■□□□□ 0.42
DNMT3A-215ENST00000496570 ZC2HC1CQ53FD0 456 aaPredicted RBP17.68■□□□□ 0.42
DNMT3A-215ENST00000496570 XKR4Q5GH76 650 aa17.68■□□□□ 0.42
DNMT3A-215ENST00000496570 RESP18Q5W5W9 173 aa17.68■□□□□ 0.42
DNMT3A-215ENST00000496570 SLC39A4Q6P5W5 647 aa17.68■□□□□ 0.42
DNMT3A-215ENST00000496570 SFR1Q86XK3 245 aa17.68■□□□□ 0.42
DNMT3A-215ENST00000496570 VPS52Q8N1B4 723 aa17.68■□□□□ 0.42
DNMT3A-215ENST00000496570 EFHBQ8N7U6 833 aa17.68■□□□□ 0.42
DNMT3A-215ENST00000496570 MRPL43Q8N983 215 aaKnown RBP17.68■□□□□ 0.42
DNMT3A-215ENST00000496570 MICAL1Q8TDZ2 1067 aa17.68■□□□□ 0.42
DNMT3A-215ENST00000496570 LEO1Q8WVC0 666 aaPredicted RBP17.68■□□□□ 0.42
DNMT3A-215ENST00000496570 FAM193BQ96PV7 902 aaPredicted RBP17.68■□□□□ 0.42
DNMT3A-215ENST00000496570 PAAF1Q9BRP4 392 aa17.68■□□□□ 0.42
DNMT3A-215ENST00000496570 ST6GALNAC4Q9H4F1 302 aa17.68■□□□□ 0.42
DNMT3A-215ENST00000496570 NGRNQ9NPE2 291 aaKnown RBP17.68■□□□□ 0.42
DNMT3A-215ENST00000496570 ENTPD7Q9NQZ7 604 aa17.68■□□□□ 0.42
DNMT3A-215ENST00000496570 KBTBD4Q9NVX7 518 aa17.68■□□□□ 0.42
DNMT3A-215ENST00000496570 CLDND1Q9NY35 253 aa17.68■□□□□ 0.42
DNMT3A-215ENST00000496570 CLEC1BQ9P126 229 aa17.68■□□□□ 0.42
DNMT3A-215ENST00000496570 PRG3Q9Y2Y8 225 aaPredicted RBP17.68■□□□□ 0.42
DNMT3A-215ENST00000496570 TRIP11Q15643 1979 aa17.68■□□□□ 0.42
DNMT3A-215ENST00000496570 H0YCG3 227 aa17.67■□□□□ 0.42
DNMT3A-215ENST00000496570 H3BQ06 376 aaPredicted RBP17.67■□□□□ 0.42
DNMT3A-215ENST00000496570 NCK2O43639 380 aa17.67■□□□□ 0.42
DNMT3A-215ENST00000496570 FAM189A1O60320 539 aa17.67■□□□□ 0.42
DNMT3A-215ENST00000496570 OR1G1P47890 313 aa17.67■□□□□ 0.42
DNMT3A-215ENST00000496570 ME1P48163 572 aa17.67■□□□□ 0.42
DNMT3A-215ENST00000496570 MCL1Q07820 350 aa17.67■□□□□ 0.42
DNMT3A-215ENST00000496570 TAS1R1Q7RTX1 841 aa17.67■□□□□ 0.42
DNMT3A-215ENST00000496570 ZNF720Q7Z2F6 126 aa17.67■□□□□ 0.42
DNMT3A-215ENST00000496570 TMC7Q7Z402 723 aa17.67■□□□□ 0.42
DNMT3A-215ENST00000496570 MAP4K3Q8IVH8 894 aa17.67■□□□□ 0.42
DNMT3A-215ENST00000496570 FAM178BQ8IXR5 827 aa17.67■□□□□ 0.42
DNMT3A-215ENST00000496570 AUTS2Q8WXX7 1259 aa17.67■□□□□ 0.42
DNMT3A-215ENST00000496570 RABGGTAQ92696 567 aa17.67■□□□□ 0.42
DNMT3A-215ENST00000496570 STAMQ92783 540 aa17.67■□□□□ 0.42
DNMT3A-215ENST00000496570 PPP1R10Q96QC0 940 aaKnown RBP17.67■□□□□ 0.42
DNMT3A-215ENST00000496570 FGFBP2Q9BYJ0 223 aa17.67■□□□□ 0.42
DNMT3A-215ENST00000496570 IKZF4Q9H2S9 585 aa17.67■□□□□ 0.42
DNMT3A-215ENST00000496570 ZHX3Q9H4I2 956 aa17.67■□□□□ 0.42
DNMT3A-215ENST00000496570 TLE6Q9H808 572 aa17.67■□□□□ 0.42
DNMT3A-215ENST00000496570 IRAK3Q9Y616 596 aa17.67■□□□□ 0.42
DNMT3A-215ENST00000496570 TTC28Q96AY4 2481 aa17.66■□□□□ 0.42
DNMT3A-215ENST00000496570 LILRB3O75022 631 aa17.66■□□□□ 0.42
DNMT3A-215ENST00000496570 CTSAP10619 480 aa17.66■□□□□ 0.42
DNMT3A-215ENST00000496570 SCP2P22307 547 aa17.66■□□□□ 0.42
DNMT3A-215ENST00000496570 IGFBP6P24592 240 aaPredicted RBP17.66■□□□□ 0.42
DNMT3A-215ENST00000496570 OSTNP61366 133 aa17.66■□□□□ 0.42
DNMT3A-215ENST00000496570 TUSC3Q13454 348 aa17.66■□□□□ 0.42
DNMT3A-215ENST00000496570 SMC1AQ14683 1233 aaKnown RBP17.66■□□□□ 0.42
DNMT3A-215ENST00000496570 AAK1Q2M2I8 961 aa17.66■□□□□ 0.42
DNMT3A-215ENST00000496570 SEZ6Q53EL9 994 aa17.66■□□□□ 0.42
DNMT3A-215ENST00000496570 DHX58Q96C10 678 aa17.66■□□□□ 0.42
DNMT3A-215ENST00000496570 MSLNLQ96KJ4 702 aa17.66■□□□□ 0.42
DNMT3A-215ENST00000496570 RPS6KC1Q96S38 1066 aa17.66■□□□□ 0.42
DNMT3A-215ENST00000496570 ANKFY1Q9P2R3 1169 aa17.66■□□□□ 0.42
DNMT3A-215ENST00000496570 CUL9Q8IWT3 2517 aa17.66■□□□□ 0.42
DNMT3A-215ENST00000496570 TCHHQ07283 1943 aa17.66■□□□□ 0.42
DNMT3A-215ENST00000496570 SMIM28A0A1B0GU29 152 aa17.65■□□□□ 0.42
DNMT3A-215ENST00000496570 TISP43B9A030 160 aa17.65■□□□□ 0.42
DNMT3A-215ENST00000496570 THP07101 528 aa17.65■□□□□ 0.42
DNMT3A-215ENST00000496570 CASP5P51878 434 aa17.65■□□□□ 0.42
DNMT3A-215ENST00000496570 SOX4Q06945 474 aaPredicted RBP17.65■□□□□ 0.42
DNMT3A-215ENST00000496570 KCNA1Q09470 495 aa17.65■□□□□ 0.42
DNMT3A-215ENST00000496570 NOLC1Q14978 699 aaKnown RBP eCLIP17.65■□□□□ 0.42
DNMT3A-215ENST00000496570 PTPN14Q15678 1187 aa17.65■□□□□ 0.42
DNMT3A-215ENST00000496570 GLRA4Q5JXX5 417 aa17.65■□□□□ 0.42
DNMT3A-215ENST00000496570 APBB1IPQ7Z5R6 666 aaPredicted RBP17.65■□□□□ 0.42
DNMT3A-215ENST00000496570 SNX27Q96L92 541 aa17.65■□□□□ 0.42
DNMT3A-215ENST00000496570 ZMAT2Q96NC0 199 aaKnown RBP17.65■□□□□ 0.42
DNMT3A-215ENST00000496570 CDCA3Q99618 268 aaPredicted RBP17.65■□□□□ 0.42
DNMT3A-215ENST00000496570 TCHPQ9BT92 498 aa17.65■□□□□ 0.42
DNMT3A-215ENST00000496570 GPR62Q9BZJ7 368 aa17.65■□□□□ 0.42
DNMT3A-215ENST00000496570 TNMDQ9H2S6 317 aa17.65■□□□□ 0.42
DNMT3A-215ENST00000496570 CUEDC2Q9H467 287 aa17.65■□□□□ 0.42
DNMT3A-215ENST00000496570 OLFML3Q9NRN5 406 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms