RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 MYL7Q01449 175 aa9.35□□□□□ -0.91
U2AF1-212ENST00000496462 SV2CQ496J9 727 aa9.35□□□□□ -0.91
U2AF1-212ENST00000496462 ANO6Q4KMQ2 910 aa9.35□□□□□ -0.91
U2AF1-212ENST00000496462 ZNF365Q70YC5 407 aa9.35□□□□□ -0.91
U2AF1-212ENST00000496462 PPP1R13LQ8WUF5 828 aa9.35□□□□□ -0.91
U2AF1-212ENST00000496462 POLD4Q9HCU8 107 aa9.35□□□□□ -0.91
U2AF1-212ENST00000496462 XPNPEP1Q9NQW7 623 aa9.35□□□□□ -0.91
U2AF1-212ENST00000496462 TBX21Q9UL17 535 aa9.35□□□□□ -0.91
U2AF1-212ENST00000496462 ACRP10323 421 aa9.34□□□□□ -0.91
U2AF1-212ENST00000496462 EEF1GP26641 437 aaKnown RBP9.34□□□□□ -0.91
U2AF1-212ENST00000496462 GRM5P41594 1212 aa9.34□□□□□ -0.91
U2AF1-212ENST00000496462 TSPY1Q01534 308 aa9.34□□□□□ -0.91
U2AF1-212ENST00000496462 GRIK3Q13003 919 aa9.34□□□□□ -0.91
U2AF1-212ENST00000496462 MORC3Q14149 939 aa9.34□□□□□ -0.91
U2AF1-212ENST00000496462 E2F4Q16254 413 aa9.34□□□□□ -0.91
U2AF1-212ENST00000496462 TMEM63BQ5T3F8 832 aa9.34□□□□□ -0.91
U2AF1-212ENST00000496462 KCNK18Q7Z418 384 aa9.34□□□□□ -0.91
U2AF1-212ENST00000496462 UBE2Q1Q7Z7E8 422 aa9.34□□□□□ -0.91
U2AF1-212ENST00000496462 IFNLR1Q8IU57 520 aaPredicted RBP9.34□□□□□ -0.91
U2AF1-212ENST00000496462 TMEM161BQ8NDZ6 487 aa9.34□□□□□ -0.91
U2AF1-212ENST00000496462 ZNF507Q8TCN5 953 aa9.34□□□□□ -0.91
U2AF1-212ENST00000496462 MMS19Q96T76 1030 aa9.34□□□□□ -0.91
U2AF1-212ENST00000496462 DSEQ9UL01 958 aa9.34□□□□□ -0.91
U2AF1-212ENST00000496462 URODP06132 367 aa9.34□□□□□ -0.91
U2AF1-212ENST00000496462 ATP4AP20648 1035 aa9.34□□□□□ -0.91
U2AF1-212ENST00000496462 MXI1P50539 228 aa9.34□□□□□ -0.91
U2AF1-212ENST00000496462 ZNF131P52739 623 aa9.34□□□□□ -0.91
U2AF1-212ENST00000496462 RBL2Q08999 1139 aa9.34□□□□□ -0.91
U2AF1-212ENST00000496462 BFSP1Q12934 665 aa9.34□□□□□ -0.91
U2AF1-212ENST00000496462 ZNF667Q5HYK9 610 aa9.34□□□□□ -0.91
U2AF1-212ENST00000496462 GBP6Q6ZN66 633 aa9.34□□□□□ -0.91
U2AF1-212ENST00000496462 EP400NLQ6ZTU2 488 aa9.34□□□□□ -0.91
U2AF1-212ENST00000496462 FILIP1Q7Z7B0 1213 aa9.34□□□□□ -0.91
U2AF1-212ENST00000496462 NEK11Q8NG66 645 aa9.34□□□□□ -0.91
U2AF1-212ENST00000496462 CPB2Q96IY4 423 aa9.34□□□□□ -0.91
U2AF1-212ENST00000496462 NOX5Q96PH1 765 aa9.34□□□□□ -0.91
U2AF1-212ENST00000496462 THAP9Q9H5L6 903 aa9.34□□□□□ -0.91
U2AF1-212ENST00000496462 ARHGAP28Q9P2N2 729 aa9.34□□□□□ -0.91
U2AF1-212ENST00000496462 UMODL1Q5DID0 1318 aa9.34□□□□□ -0.91
U2AF1-212ENST00000496462 USP8P40818 1118 aa9.34□□□□□ -0.91
U2AF1-212ENST00000496462 MAGEA10P43363 369 aaPredicted RBP9.34□□□□□ -0.91
U2AF1-212ENST00000496462 LPIN1Q14693 890 aa9.34□□□□□ -0.91
U2AF1-212ENST00000496462 ELMOD1Q8N336 334 aa9.34□□□□□ -0.91
U2AF1-212ENST00000496462 FBXO22Q8NEZ5 403 aa9.34□□□□□ -0.91
U2AF1-212ENST00000496462 NT5C1BQ96P26 610 aa9.34□□□□□ -0.91
U2AF1-212ENST00000496462 RAD9AQ99638 391 aa9.34□□□□□ -0.91
U2AF1-212ENST00000496462 ACO2Q99798 780 aaKnown RBP9.34□□□□□ -0.91
U2AF1-212ENST00000496462 KIFC3Q9BVG8 833 aa9.34□□□□□ -0.91
U2AF1-212ENST00000496462 DNAJC25Q9H1X3 360 aa9.34□□□□□ -0.91
U2AF1-212ENST00000496462 FZD8Q9H461 694 aa9.34□□□□□ -0.91
U2AF1-212ENST00000496462 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.34□□□□□ -0.91
U2AF1-212ENST00000496462 TNRC18O15417 2968 aaPredicted RBP9.33□□□□□ -0.92
U2AF1-212ENST00000496462 MYBP10242 640 aa9.33□□□□□ -0.92
U2AF1-212ENST00000496462 CTNNB1P35222 781 aa9.33□□□□□ -0.92
U2AF1-212ENST00000496462 MNX1P50219 401 aaPredicted RBP9.33□□□□□ -0.92
U2AF1-212ENST00000496462 PAN2Q504Q3 1202 aaKnown RBP9.33□□□□□ -0.92
U2AF1-212ENST00000496462 DERAQ9Y315 318 aa9.33□□□□□ -0.92
U2AF1-212ENST00000496462 NFE2L3Q9Y4A8 694 aa9.33□□□□□ -0.92
U2AF1-212ENST00000496462 A0A0G2JMZ2 1700 aa9.33□□□□□ -0.92
U2AF1-212ENST00000496462 GOLGA8IPA6NC78 632 aa9.33□□□□□ -0.92
U2AF1-212ENST00000496462 GOLGA8JA6NMD2 632 aa9.33□□□□□ -0.92
U2AF1-212ENST00000496462 RPL9P32969 192 aaKnown RBP9.33□□□□□ -0.92
U2AF1-212ENST00000496462 SKIV2LQ15477 1246 aaKnown RBP9.33□□□□□ -0.92
U2AF1-212ENST00000496462 LRSAM1Q6UWE0 723 aa9.33□□□□□ -0.92
U2AF1-212ENST00000496462 FAM228AQ86W67 206 aa9.33□□□□□ -0.92
U2AF1-212ENST00000496462 AOPEPQ8N6M6 819 aa9.33□□□□□ -0.92
U2AF1-212ENST00000496462 ENGASEQ8NFI3 743 aa9.33□□□□□ -0.92
U2AF1-212ENST00000496462 C11orf84Q9BUA3 381 aaPredicted RBP9.33□□□□□ -0.92
U2AF1-212ENST00000496462 ERVK-5Q9HDB9 667 aa9.33□□□□□ -0.92
U2AF1-212ENST00000496462 A0A0U1RQF3 1178 aa9.33□□□□□ -0.92
U2AF1-212ENST00000496462 TSPAN1O60635 241 aa9.33□□□□□ -0.92
U2AF1-212ENST00000496462 AFPP02771 609 aaKnown RBP9.33□□□□□ -0.92
U2AF1-212ENST00000496462 ARF4P18085 180 aaPredicted RBP9.33□□□□□ -0.92
U2AF1-212ENST00000496462 FGFR4P22455 802 aa9.33□□□□□ -0.92
U2AF1-212ENST00000496462 VAMP7P51809 220 aa9.33□□□□□ -0.92
U2AF1-212ENST00000496462 MBTD1Q05BQ5 628 aa9.33□□□□□ -0.92
U2AF1-212ENST00000496462 ZSCAN23Q3MJ62 389 aa9.33□□□□□ -0.92
U2AF1-212ENST00000496462 ZC2HC1CQ53FD0 456 aaPredicted RBP9.33□□□□□ -0.92
U2AF1-212ENST00000496462 FRMD5Q7Z6J6 570 aa9.33□□□□□ -0.92
U2AF1-212ENST00000496462 ENOX1Q8TC92 643 aaKnown RBP9.33□□□□□ -0.92
U2AF1-212ENST00000496462 EMILIN2Q9BXX0 1053 aa9.33□□□□□ -0.92
U2AF1-212ENST00000496462 AGPAT3Q9NRZ7 376 aa9.33□□□□□ -0.92
U2AF1-212ENST00000496462 SPG21Q9NZD8 308 aa9.33□□□□□ -0.92
U2AF1-212ENST00000496462 ZC3H11AO75152 810 aaKnown RBP eCLIP9.32□□□□□ -0.92
U2AF1-212ENST00000496462 TAF6P49848 677 aa9.32□□□□□ -0.92
U2AF1-212ENST00000496462 BPIFB4P59827 614 aa9.32□□□□□ -0.92
U2AF1-212ENST00000496462 SNRNP35Q16560 246 aaKnown RBP9.32□□□□□ -0.92
U2AF1-212ENST00000496462 UVSSAQ2YD98 709 aa9.32□□□□□ -0.92
U2AF1-212ENST00000496462 VWA3BQ502W6 1294 aa9.32□□□□□ -0.92
U2AF1-212ENST00000496462 CDCA2Q69YH5 1023 aaPredicted RBP9.32□□□□□ -0.92
U2AF1-212ENST00000496462 ECHDC2Q86YB7 292 aa9.32□□□□□ -0.92
U2AF1-212ENST00000496462 MIS12Q9H081 205 aa9.32□□□□□ -0.92
U2AF1-212ENST00000496462 EHD2Q9NZN4 543 aa9.32□□□□□ -0.92
U2AF1-212ENST00000496462 DAAM1Q9Y4D1 1078 aa9.32□□□□□ -0.92
U2AF1-212ENST00000496462 MAN2A1Q16706 1144 aa9.32□□□□□ -0.92
U2AF1-212ENST00000496462 KRT39Q6A163 491 aa9.32□□□□□ -0.92
U2AF1-212ENST00000496462 DCP1BQ8IZD4 617 aaKnown RBP9.32□□□□□ -0.92
U2AF1-212ENST00000496462 TMC2Q8TDI7 906 aa9.32□□□□□ -0.92
U2AF1-212ENST00000496462 DNAJC19Q96DA6 116 aa9.32□□□□□ -0.92
U2AF1-212ENST00000496462 TRIM44Q96DX7 344 aaPredicted RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms