RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 CHKBQ9Y259 395 aa9.69□□□□□ -0.86
HPS4-217ENST00000496385 PVALEFA0A1B0GWK0 134 aa9.68□□□□□ -0.86
HPS4-217ENST00000496385 CAPN9O14815 690 aa9.68□□□□□ -0.86
HPS4-217ENST00000496385 HNRNPCP07910 306 aaKnown RBP eCLIP9.68□□□□□ -0.86
HPS4-217ENST00000496385 TAC1P20366 129 aa9.68□□□□□ -0.86
HPS4-217ENST00000496385 TARSP26639 723 aaKnown RBP9.68□□□□□ -0.86
HPS4-217ENST00000496385 CALML3P27482 149 aa9.68□□□□□ -0.86
HPS4-217ENST00000496385 CHRNA3P32297 505 aa9.68□□□□□ -0.86
HPS4-217ENST00000496385 PHKA1P46020 1223 aa9.68□□□□□ -0.86
HPS4-217ENST00000496385 SLC18A1P54219 525 aa9.68□□□□□ -0.86
HPS4-217ENST00000496385 MAPK7Q13164 816 aa9.68□□□□□ -0.86
HPS4-217ENST00000496385 BTG3Q14201 252 aaPredicted RBP9.68□□□□□ -0.86
HPS4-217ENST00000496385 ZNF568Q3ZCX4 644 aa9.68□□□□□ -0.86
HPS4-217ENST00000496385 ZCWPW2Q504Y3 356 aa9.68□□□□□ -0.86
HPS4-217ENST00000496385 CYFIP1Q7L576 1253 aa9.68□□□□□ -0.86
HPS4-217ENST00000496385 NT5DC3Q86UY8 548 aa9.68□□□□□ -0.86
HPS4-217ENST00000496385 FBXO25Q8TCJ0 367 aa9.68□□□□□ -0.86
HPS4-217ENST00000496385 DIS3LQ8TF46 1054 aaKnown RBP9.68□□□□□ -0.86
HPS4-217ENST00000496385 ESR2Q92731 530 aa9.68□□□□□ -0.86
HPS4-217ENST00000496385 CORO1BQ9BR76 489 aa9.68□□□□□ -0.86
HPS4-217ENST00000496385 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.68□□□□□ -0.86
HPS4-217ENST00000496385 BHMT2Q9H2M3 363 aa9.68□□□□□ -0.86
HPS4-217ENST00000496385 RHBDL2Q9NX52 303 aa9.68□□□□□ -0.86
HPS4-217ENST00000496385 ABCF2Q9UG63 623 aa9.68□□□□□ -0.86
HPS4-217ENST00000496385 ADAMTS1Q9UHI8 967 aa9.68□□□□□ -0.86
HPS4-217ENST00000496385 AMFRQ9UKV5 643 aa9.68□□□□□ -0.86
HPS4-217ENST00000496385 SCN9AQ15858 1988 aa9.68□□□□□ -0.86
HPS4-217ENST00000496385 F8W8V4 182 aa9.68□□□□□ -0.86
HPS4-217ENST00000496385 DDX3XO00571 662 aaKnown RBP eCLIP9.68□□□□□ -0.86
HPS4-217ENST00000496385 SLC5A1P13866 664 aa9.68□□□□□ -0.86
HPS4-217ENST00000496385 GNAT2P19087 354 aa9.68□□□□□ -0.86
HPS4-217ENST00000496385 FGFR2P21802 821 aa9.68□□□□□ -0.86
HPS4-217ENST00000496385 MCM7P33993 719 aa9.68□□□□□ -0.86
HPS4-217ENST00000496385 CDR2Q01850 454 aa9.68□□□□□ -0.86
HPS4-217ENST00000496385 CXCL9Q07325 125 aa9.68□□□□□ -0.86
HPS4-217ENST00000496385 MOGSQ13724 837 aa9.68□□□□□ -0.86
HPS4-217ENST00000496385 UBE4AQ14139 1066 aa9.68□□□□□ -0.86
HPS4-217ENST00000496385 SPIDRQ14159 915 aa9.68□□□□□ -0.86
HPS4-217ENST00000496385 WDR72Q3MJ13 1102 aa9.68□□□□□ -0.86
HPS4-217ENST00000496385 SLC44A4Q53GD3 710 aa9.68□□□□□ -0.86
HPS4-217ENST00000496385 ARMCX6Q7L4S7 300 aa9.68□□□□□ -0.86
HPS4-217ENST00000496385 JAMLQ86YT9 394 aa9.68□□□□□ -0.86
HPS4-217ENST00000496385 PASD1Q8IV76 773 aa9.68□□□□□ -0.86
HPS4-217ENST00000496385 CCDC65Q8IXS2 484 aa9.68□□□□□ -0.86
HPS4-217ENST00000496385 IFNL3Q8IZI9 196 aa9.68□□□□□ -0.86
HPS4-217ENST00000496385 ARHGAP24Q8N264 748 aa9.68□□□□□ -0.86
HPS4-217ENST00000496385 CCDC82Q8N4S0 544 aa9.68□□□□□ -0.86
HPS4-217ENST00000496385 NRG4Q8WWG1 115 aa9.68□□□□□ -0.86
HPS4-217ENST00000496385 TSG101Q99816 390 aa9.68□□□□□ -0.86
HPS4-217ENST00000496385 TRIM51Q9BSJ1 452 aa9.68□□□□□ -0.86
HPS4-217ENST00000496385 PCYOX1Q9UHG3 505 aa9.68□□□□□ -0.86
HPS4-217ENST00000496385 IRS2Q9Y4H2 1338 aa9.67□□□□□ -0.86
HPS4-217ENST00000496385 GFPT2O94808 682 aa9.67□□□□□ -0.86
HPS4-217ENST00000496385 NOL4O94818 638 aa9.67□□□□□ -0.86
HPS4-217ENST00000496385 TTLL1O95922 423 aa9.67□□□□□ -0.86
HPS4-217ENST00000496385 CRABP2P29373 138 aa9.67□□□□□ -0.86
HPS4-217ENST00000496385 ADARP55265 1226 aaKnown RBP9.67□□□□□ -0.86
HPS4-217ENST00000496385 OXCT1P55809 520 aa9.67□□□□□ -0.86
HPS4-217ENST00000496385 DSG1Q02413 1049 aa9.67□□□□□ -0.86
HPS4-217ENST00000496385 MAP3K10Q02779 954 aa9.67□□□□□ -0.86
HPS4-217ENST00000496385 LRRC14Q15048 493 aa9.67□□□□□ -0.86
HPS4-217ENST00000496385 DNAJC14Q6Y2X3 702 aaPredicted RBP9.67□□□□□ -0.86
HPS4-217ENST00000496385 PHLDB2Q86SQ0 1253 aa9.67□□□□□ -0.86
HPS4-217ENST00000496385 RBM46Q8TBY0 533 aaKnown RBP9.67□□□□□ -0.86
HPS4-217ENST00000496385 CD209Q9NNX6 404 aa9.67□□□□□ -0.86
HPS4-217ENST00000496385 TCP11L1Q9NUJ3 509 aa9.67□□□□□ -0.86
HPS4-217ENST00000496385 GRHL1Q9NZI5 618 aa9.67□□□□□ -0.86
HPS4-217ENST00000496385 LGALS13Q9UHV8 139 aa9.67□□□□□ -0.86
HPS4-217ENST00000496385 DBR1Q9UK59 544 aaKnown RBP9.67□□□□□ -0.86
HPS4-217ENST00000496385 ZNRF3Q9ULT6 936 aa9.67□□□□□ -0.86
HPS4-217ENST00000496385 CHMP2BQ9UQN3 213 aa9.67□□□□□ -0.86
HPS4-217ENST00000496385 ADGRA3Q8IWK6 1321 aa9.67□□□□□ -0.86
HPS4-217ENST00000496385 SMIM23A6NLE4 172 aa9.67□□□□□ -0.86
HPS4-217ENST00000496385 GGPS1O95749 300 aa9.67□□□□□ -0.86
HPS4-217ENST00000496385 FGGP02679 453 aa9.67□□□□□ -0.86
HPS4-217ENST00000496385 HIBADHP31937 336 aaKnown RBP9.67□□□□□ -0.86
HPS4-217ENST00000496385 GTF2IP78347 998 aa9.67□□□□□ -0.86
HPS4-217ENST00000496385 HNRNPDQ14103 355 aaKnown RBP9.67□□□□□ -0.86
HPS4-217ENST00000496385 ACAD11Q709F0 780 aa9.67□□□□□ -0.86
HPS4-217ENST00000496385 ANKRD35Q8N283 1001 aa9.67□□□□□ -0.86
HPS4-217ENST00000496385 BTBD10Q9BSF8 475 aa9.67□□□□□ -0.86
HPS4-217ENST00000496385 OXCT2Q9BYC2 517 aaPredicted RBP9.67□□□□□ -0.86
HPS4-217ENST00000496385 KCNK9Q9NPC2 374 aa9.67□□□□□ -0.86
HPS4-217ENST00000496385 ETNK2Q9NVF9 386 aa9.67□□□□□ -0.86
HPS4-217ENST00000496385 ZDHHC7Q9NXF8 308 aa9.67□□□□□ -0.86
HPS4-217ENST00000496385 TMEM98Q9Y2Y6 226 aa9.67□□□□□ -0.86
HPS4-217ENST00000496385 TBX10O75333 385 aa9.66□□□□□ -0.86
HPS4-217ENST00000496385 ASMTLO95671 621 aa9.66□□□□□ -0.86
HPS4-217ENST00000496385 BRAFP15056 766 aa9.66□□□□□ -0.86
HPS4-217ENST00000496385 CYP11B2P19099 503 aa9.66□□□□□ -0.86
HPS4-217ENST00000496385 PRKCIP41743 596 aa9.66□□□□□ -0.86
HPS4-217ENST00000496385 MARSP56192 900 aaKnown RBP9.66□□□□□ -0.86
HPS4-217ENST00000496385 ASIC1P78348 528 aa9.66□□□□□ -0.86
HPS4-217ENST00000496385 XIAPP98170 497 aa9.66□□□□□ -0.86
HPS4-217ENST00000496385 TMEM62Q0P6H9 643 aa9.66□□□□□ -0.86
HPS4-217ENST00000496385 NR1H3Q13133 447 aa9.66□□□□□ -0.86
HPS4-217ENST00000496385 GRM2Q14416 872 aa9.66□□□□□ -0.86
HPS4-217ENST00000496385 HSP90AA5PQ58FG0 334 aa9.66□□□□□ -0.86
HPS4-217ENST00000496385 CFAP157Q5JU67 520 aa9.66□□□□□ -0.86
HPS4-217ENST00000496385 ZNF804AQ7Z570 1209 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms