RNA–Protein interactions for RNA: ENST00000496144.5

VPS13B-206, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 5,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-206ENST00000496144 KCNMB3Q9NPA1 279 aa9.27□□□□□ -0.93
VPS13B-206ENST00000496144 PRMT7Q9NVM4 692 aaPredicted RBP9.27□□□□□ -0.93
VPS13B-206ENST00000496144 PVALEFA0A1B0GWK0 134 aa9.27□□□□□ -0.93
VPS13B-206ENST00000496144 POTEMA6NI47 508 aa9.27□□□□□ -0.93
VPS13B-206ENST00000496144 DGAT1O75907 488 aa9.27□□□□□ -0.93
VPS13B-206ENST00000496144 TPM1P09493 284 aa9.27□□□□□ -0.93
VPS13B-206ENST00000496144 CCDC175P0C221 793 aa9.27□□□□□ -0.93
VPS13B-206ENST00000496144 CCNE1P24864 410 aa9.27□□□□□ -0.93
VPS13B-206ENST00000496144 RAD9BQ6WBX8 426 aa9.27□□□□□ -0.93
VPS13B-206ENST00000496144 PDCL2Q8N4E4 241 aa9.27□□□□□ -0.93
VPS13B-206ENST00000496144 KIFAP3Q92845 792 aa9.27□□□□□ -0.93
VPS13B-206ENST00000496144 DNAI1Q9UI46 699 aa9.27□□□□□ -0.93
VPS13B-206ENST00000496144 MYMKA6NI61 221 aa9.26□□□□□ -0.93
VPS13B-206ENST00000496144 SMAD4Q13485 552 aaKnown RBP9.26□□□□□ -0.93
VPS13B-206ENST00000496144 MCM6Q14566 821 aa9.26□□□□□ -0.93
VPS13B-206ENST00000496144 EMC2Q15006 297 aa9.26□□□□□ -0.93
VPS13B-206ENST00000496144 ANKRD40Q6AI12 368 aa9.26□□□□□ -0.93
VPS13B-206ENST00000496144 CYP26C1Q6V0L0 522 aa9.26□□□□□ -0.93
VPS13B-206ENST00000496144 CCDC149Q6ZUS6 474 aa9.26□□□□□ -0.93
VPS13B-206ENST00000496144 SNX29Q8TEQ0 813 aa9.26□□□□□ -0.93
VPS13B-206ENST00000496144 SRRTQ9BXP5 876 aaKnown RBP9.26□□□□□ -0.93
VPS13B-206ENST00000496144 MRPL44Q9H9J2 332 aaKnown RBP9.26□□□□□ -0.93
VPS13B-206ENST00000496144 ARIH2O95376 493 aa9.26□□□□□ -0.93
VPS13B-206ENST00000496144 EHHADHQ08426 723 aa9.26□□□□□ -0.93
VPS13B-206ENST00000496144 MTF1Q14872 753 aa9.26□□□□□ -0.93
VPS13B-206ENST00000496144 VEPH1Q14D04 833 aa9.26□□□□□ -0.93
VPS13B-206ENST00000496144 PLEKHG4Q58EX7 1191 aa9.26□□□□□ -0.93
VPS13B-206ENST00000496144 PPM1LQ5SGD2 360 aa9.26□□□□□ -0.93
VPS13B-206ENST00000496144 LRRC71Q8N4P6 559 aa9.26□□□□□ -0.93
VPS13B-206ENST00000496144 CRYGNQ8WXF5 182 aa9.26□□□□□ -0.93
VPS13B-206ENST00000496144 DNAJC7Q99615 494 aa9.26□□□□□ -0.93
VPS13B-206ENST00000496144 POLR3FQ9H1D9 316 aaPredicted RBP9.26□□□□□ -0.93
VPS13B-206ENST00000496144 MRPS17Q9Y2R5 130 aaKnown RBP9.26□□□□□ -0.93
VPS13B-206ENST00000496144 ARPP19P56211 112 aa9.26□□□□□ -0.93
VPS13B-206ENST00000496144 PRPF4BQ13523 1007 aaKnown RBP9.26□□□□□ -0.93
VPS13B-206ENST00000496144 RNF149Q8NC42 400 aa9.26□□□□□ -0.93
VPS13B-206ENST00000496144 RSAD1Q9HA92 442 aa9.26□□□□□ -0.93
VPS13B-206ENST00000496144 ARP10275 920 aa9.26□□□□□ -0.93
VPS13B-206ENST00000496144 YWHABP31946 246 aaKnown RBP9.26□□□□□ -0.93
VPS13B-206ENST00000496144 LIG4P49917 911 aa9.26□□□□□ -0.93
VPS13B-206ENST00000496144 PSMD2Q13200 908 aa9.26□□□□□ -0.93
VPS13B-206ENST00000496144 WNT8AQ9H1J5 351 aa9.26□□□□□ -0.93
VPS13B-206ENST00000496144 SLITRK6Q9H5Y7 841 aa9.26□□□□□ -0.93
VPS13B-206ENST00000496144 ELAC1Q9H777 363 aaKnown RBP9.26□□□□□ -0.93
VPS13B-206ENST00000496144 ANKEF1Q9NU02 776 aa9.26□□□□□ -0.93
VPS13B-206ENST00000496144 ADGRG1Q9Y653 693 aa9.26□□□□□ -0.93
VPS13B-206ENST00000496144 CLCN3P51790 818 aa9.25□□□□□ -0.93
VPS13B-206ENST00000496144 AMPD2Q01433 879 aa9.25□□□□□ -0.93
VPS13B-206ENST00000496144 TAP1Q03518 808 aa9.25□□□□□ -0.93
VPS13B-206ENST00000496144 MIIPQ5JXC2 388 aa9.25□□□□□ -0.93
VPS13B-206ENST00000496144 CPLX3Q8WVH0 158 aa9.25□□□□□ -0.93
VPS13B-206ENST00000496144 MEIS2O14770 477 aa9.25□□□□□ -0.93
VPS13B-206ENST00000496144 STK4Q13043 487 aa9.25□□□□□ -0.93
VPS13B-206ENST00000496144 ZC3H14Q6PJT7 736 aaKnown RBP9.25□□□□□ -0.93
VPS13B-206ENST00000496144 POF1BQ8WVV4 589 aa9.25□□□□□ -0.93
VPS13B-206ENST00000496144 CNOT6LQ96LI5 555 aaKnown RBP9.25□□□□□ -0.93
VPS13B-206ENST00000496144 DESI2Q9BSY9 194 aa9.25□□□□□ -0.93
VPS13B-206ENST00000496144 TIPINQ9BVW5 301 aa9.25□□□□□ -0.93
VPS13B-206ENST00000496144 CYP4A22Q5TCH4 519 aa9.25□□□□□ -0.93
VPS13B-206ENST00000496144 FOXR2Q6PJQ5 311 aa9.25□□□□□ -0.93
VPS13B-206ENST00000496144 TMTC1Q8IUR5 882 aa9.25□□□□□ -0.93
VPS13B-206ENST00000496144 LRRN4CLQ8ND94 238 aa9.25□□□□□ -0.93
VPS13B-206ENST00000496144 LXNQ9BS40 222 aa9.25□□□□□ -0.93
VPS13B-206ENST00000496144 TUFT1Q9NNX1 390 aa9.25□□□□□ -0.93
VPS13B-206ENST00000496144 KMT5AQ9NQR1 393 aa9.25□□□□□ -0.93
VPS13B-206ENST00000496144 COL20A1Q9P218 1284 aa9.25□□□□□ -0.93
VPS13B-206ENST00000496144 CAPN11Q9UMQ6 739 aa9.25□□□□□ -0.93
VPS13B-206ENST00000496144 ZNF236Q9UL36 1845 aa9.25□□□□□ -0.93
VPS13B-206ENST00000496144 LINC01553A4QN01 128 aa9.25□□□□□ -0.93
VPS13B-206ENST00000496144 ENPP3O14638 875 aa9.25□□□□□ -0.93
VPS13B-206ENST00000496144 ATP8B3O60423 1300 aa9.25□□□□□ -0.93
VPS13B-206ENST00000496144 SCP2P22307 547 aa9.25□□□□□ -0.93
VPS13B-206ENST00000496144 DSTYKQ6XUX3 929 aa9.25□□□□□ -0.93
VPS13B-206ENST00000496144 CSGALNACT2Q8N6G5 542 aa9.25□□□□□ -0.93
VPS13B-206ENST00000496144 COLGALT1Q8NBJ5 622 aa9.25□□□□□ -0.93
VPS13B-206ENST00000496144 IL31RAQ8NI17 732 aa9.25□□□□□ -0.93
VPS13B-206ENST00000496144 CYP26B1Q9NR63 512 aa9.25□□□□□ -0.93
VPS13B-206ENST00000496144 MRFAP1Q9Y605 127 aa9.25□□□□□ -0.93
VPS13B-206ENST00000496144 H3BNC9 293 aa9.25□□□□□ -0.93
VPS13B-206ENST00000496144 PRRG1O14668 218 aa9.25□□□□□ -0.93
VPS13B-206ENST00000496144 DCXO43602 365 aa9.25□□□□□ -0.93
VPS13B-206ENST00000496144 GLUD1P00367 558 aa9.25□□□□□ -0.93
VPS13B-206ENST00000496144 APPL2Q8NEU8 664 aa9.25□□□□□ -0.93
VPS13B-206ENST00000496144 ATOH1Q92858 354 aaPredicted RBP9.25□□□□□ -0.93
VPS13B-206ENST00000496144 PABPC5Q96DU9 382 aaKnown RBP9.25□□□□□ -0.93
VPS13B-206ENST00000496144 GUCD1Q96NT3 240 aa9.25□□□□□ -0.93
VPS13B-206ENST00000496144 TTYH3Q9C0H2 523 aa9.25□□□□□ -0.93
VPS13B-206ENST00000496144 UMODL1Q5DID0 1318 aa9.24□□□□□ -0.93
VPS13B-206ENST00000496144 A0A1W2PQJ5 194 aa9.24□□□□□ -0.93
VPS13B-206ENST00000496144 RNF225M0QZC1 329 aaPredicted RBP9.24□□□□□ -0.93
VPS13B-206ENST00000496144 MEIS1O00470 390 aa9.24□□□□□ -0.93
VPS13B-206ENST00000496144 CYP4A11Q02928 519 aa9.24□□□□□ -0.93
VPS13B-206ENST00000496144 MKRN4PQ13434 485 aaPredicted RBP9.24□□□□□ -0.93
VPS13B-206ENST00000496144 RARS2Q5T160 578 aaKnown RBP9.24□□□□□ -0.93
VPS13B-206ENST00000496144 DYDC2Q96IM9 177 aa9.24□□□□□ -0.93
VPS13B-206ENST00000496144 UROC1Q96N76 676 aa9.24□□□□□ -0.93
VPS13B-206ENST00000496144 YBX2Q9Y2T7 364 aaKnown RBP9.24□□□□□ -0.93
VPS13B-206ENST00000496144 BAZ2BQ9UIF8 2168 aaKnown RBP9.24□□□□□ -0.93
VPS13B-206ENST00000496144 NAA30Q147X3 362 aaPredicted RBP9.24□□□□□ -0.93
VPS13B-206ENST00000496144 KCNK18Q7Z418 384 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms