RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 TBX21Q9UL17 535 aa5.09□□□□□ -1.59
VPS52-222ENST00000495981 SPEF1Q9Y4P9 236 aa5.09□□□□□ -1.59
VPS52-222ENST00000495981 FPGT-TNNI3KV9GXZ4 949 aa5.09□□□□□ -1.59
VPS52-222ENST00000495981 ZFYVE26Q68DK2 2539 aa5.09□□□□□ -1.59
VPS52-222ENST00000495981 GPR179Q6PRD1 2367 aa5.09□□□□□ -1.59
VPS52-222ENST00000495981 LCTP09848 1927 aa5.09□□□□□ -1.6
VPS52-222ENST00000495981 FLNBO75369 2602 aaKnown RBP5.09□□□□□ -1.6
VPS52-222ENST00000495981 TECTAO75443 2155 aa5.08□□□□□ -1.6
VPS52-222ENST00000495981 WDR64B1ANS9 1081 aa5.08□□□□□ -1.6
VPS52-222ENST00000495981 AQP7O14520 342 aa5.08□□□□□ -1.6
VPS52-222ENST00000495981 FKBP9O95302 570 aa5.08□□□□□ -1.6
VPS52-222ENST00000495981 GDF11O95390 407 aa5.08□□□□□ -1.6
VPS52-222ENST00000495981 TIMP1P01033 207 aa5.08□□□□□ -1.6
VPS52-222ENST00000495981 MYL1P05976 194 aa5.08□□□□□ -1.6
VPS52-222ENST00000495981 THBDP07204 575 aa5.08□□□□□ -1.6
VPS52-222ENST00000495981 ASNSP08243 561 aa5.08□□□□□ -1.6
VPS52-222ENST00000495981 GNAI3P08754 354 aa5.08□□□□□ -1.6
VPS52-222ENST00000495981 PYGMP11217 842 aa5.08□□□□□ -1.6
VPS52-222ENST00000495981 RGS2P41220 211 aa5.08□□□□□ -1.6
VPS52-222ENST00000495981 BACE1P56817 501 aa5.08□□□□□ -1.6
VPS52-222ENST00000495981 GSTO1P78417 241 aa5.08□□□□□ -1.6
VPS52-222ENST00000495981 INSM1Q01101 510 aaPredicted RBP5.08□□□□□ -1.6
VPS52-222ENST00000495981 AMPD2Q01433 879 aa5.08□□□□□ -1.6
VPS52-222ENST00000495981 GUCY1A3Q02108 690 aa5.08□□□□□ -1.6
VPS52-222ENST00000495981 HLTFQ14527 1009 aaKnown RBP eCLIP5.08□□□□□ -1.6
VPS52-222ENST00000495981 DPY19L1Q2PZI1 675 aa5.08□□□□□ -1.6
VPS52-222ENST00000495981 SPTY2D1Q68D10 685 aaPredicted RBP5.08□□□□□ -1.6
VPS52-222ENST00000495981 SEZ6L2Q6UXD5 910 aa5.08□□□□□ -1.6
VPS52-222ENST00000495981 ATF7IPQ6VMQ6 1270 aa5.08□□□□□ -1.6
VPS52-222ENST00000495981 TSHZ1Q6ZSZ6 1077 aa5.08□□□□□ -1.6
VPS52-222ENST00000495981 FKBP9P1Q75LS8 142 aa5.08□□□□□ -1.6
VPS52-222ENST00000495981 ASCL5Q7RTU5 278 aa5.08□□□□□ -1.6
VPS52-222ENST00000495981 DGKHQ86XP1 1220 aa5.08□□□□□ -1.6
VPS52-222ENST00000495981 MAPKAPK5Q8IW41 473 aa5.08□□□□□ -1.6
VPS52-222ENST00000495981 TPH2Q8IWU9 490 aa5.08□□□□□ -1.6
VPS52-222ENST00000495981 SAMD3Q8N6K7 520 aa5.08□□□□□ -1.6
VPS52-222ENST00000495981 C12orf50Q8NA57 414 aaPredicted RBP5.08□□□□□ -1.6
VPS52-222ENST00000495981 GPRC5AQ8NFJ5 357 aa5.08□□□□□ -1.6
VPS52-222ENST00000495981 PCDH19Q8TAB3 1148 aa5.08□□□□□ -1.6
VPS52-222ENST00000495981 EDC3Q96F86 508 aaKnown RBP5.08□□□□□ -1.6
VPS52-222ENST00000495981 Q96M66 194 aa5.08□□□□□ -1.6
VPS52-222ENST00000495981 PHF20Q9BVI0 1012 aa5.08□□□□□ -1.6
VPS52-222ENST00000495981 ZNF700Q9H0M5 742 aa5.08□□□□□ -1.6
VPS52-222ENST00000495981 TCF7L1Q9HCS4 588 aa5.08□□□□□ -1.6
VPS52-222ENST00000495981 SSU72Q9NP77 194 aaKnown RBP5.08□□□□□ -1.6
VPS52-222ENST00000495981 EMC7Q9NPA0 242 aa5.08□□□□□ -1.6
VPS52-222ENST00000495981 GPR108Q9NPR9 543 aa5.08□□□□□ -1.6
VPS52-222ENST00000495981 AATFQ9NY61 560 aaKnown RBP eCLIP5.08□□□□□ -1.6
VPS52-222ENST00000495981 COQ6Q9Y2Z9 468 aa5.08□□□□□ -1.6
VPS52-222ENST00000495981 UMODL1Q5DID0 1318 aa5.07□□□□□ -1.6
VPS52-222ENST00000495981 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.07□□□□□ -1.6
VPS52-222ENST00000495981 SHISA3A0PJX4 238 aa5.07□□□□□ -1.6
VPS52-222ENST00000495981 SIGLEC6O43699 453 aa5.07□□□□□ -1.6
VPS52-222ENST00000495981 CREB3O43889 395 aa5.07□□□□□ -1.6
VPS52-222ENST00000495981 COBLO75128 1261 aa5.07□□□□□ -1.6
VPS52-222ENST00000495981 PRAMEF1O95521 474 aa5.07□□□□□ -1.6
VPS52-222ENST00000495981 EOMESO95936 686 aa5.07□□□□□ -1.6
VPS52-222ENST00000495981 PGK1P00558 417 aa5.07□□□□□ -1.6
VPS52-222ENST00000495981 GNAI2P04899 355 aa5.07□□□□□ -1.6
VPS52-222ENST00000495981 UQCRFS1P1P0C7P4 283 aa5.07□□□□□ -1.6
VPS52-222ENST00000495981 LCP1P13796 627 aa5.07□□□□□ -1.6
VPS52-222ENST00000495981 ATP2A2P16615 1042 aaKnown RBP5.07□□□□□ -1.6
VPS52-222ENST00000495981 TAL1P17542 331 aaPredicted RBP5.07□□□□□ -1.6
VPS52-222ENST00000495981 VCAM1P19320 739 aa5.07□□□□□ -1.6
VPS52-222ENST00000495981 ITIH2P19823 946 aa5.07□□□□□ -1.6
VPS52-222ENST00000495981 GUCY1A2P33402 732 aa5.07□□□□□ -1.6
VPS52-222ENST00000495981 ETV3P41162 512 aa5.07□□□□□ -1.6
VPS52-222ENST00000495981 PREPP48147 710 aa5.07□□□□□ -1.6
VPS52-222ENST00000495981 LSSP48449 732 aa5.07□□□□□ -1.6
VPS52-222ENST00000495981 GPR85P60893 370 aa5.07□□□□□ -1.6
VPS52-222ENST00000495981 IRX3P78415 501 aaPredicted RBP5.07□□□□□ -1.6
VPS52-222ENST00000495981 GRB14Q14449 540 aa5.07□□□□□ -1.6
VPS52-222ENST00000495981 PTPN21Q16825 1174 aa5.07□□□□□ -1.6
VPS52-222ENST00000495981 ACBD5Q5T8D3 534 aaPredicted RBP5.07□□□□□ -1.6
VPS52-222ENST00000495981 MFSD14CQ5VZR4 134 aa5.07□□□□□ -1.6
VPS52-222ENST00000495981 MFSD5Q6N075 450 aa5.07□□□□□ -1.6
VPS52-222ENST00000495981 CDPF1Q6NVV7 123 aa5.07□□□□□ -1.6
VPS52-222ENST00000495981 TATDN1Q6P1N9 297 aa5.07□□□□□ -1.6
VPS52-222ENST00000495981 LBX2Q6XYB7 198 aa5.07□□□□□ -1.6
VPS52-222ENST00000495981 PPIL6Q8IXY8 311 aa5.07□□□□□ -1.6
VPS52-222ENST00000495981 TMEM57Q8N5G2 664 aa5.07□□□□□ -1.6
VPS52-222ENST00000495981 SLC44A5Q8NCS7 719 aa5.07□□□□□ -1.6
VPS52-222ENST00000495981 SVIPQ8NHG7 77 aa5.07□□□□□ -1.6
VPS52-222ENST00000495981 SSH3Q8TE77 659 aa5.07□□□□□ -1.6
VPS52-222ENST00000495981 TGFBRAP1Q8WUH2 860 aa5.07□□□□□ -1.6
VPS52-222ENST00000495981 FUBP3Q96I24 572 aaKnown RBP eCLIP5.07□□□□□ -1.6
VPS52-222ENST00000495981 ZFYVE21Q9BQ24 234 aa5.07□□□□□ -1.6
VPS52-222ENST00000495981 PAGR1Q9BTK6 254 aa5.07□□□□□ -1.6
VPS52-222ENST00000495981 SLC13A1Q9BZW2 595 aa5.07□□□□□ -1.6
VPS52-222ENST00000495981 KCNH6Q9H252 994 aa5.07□□□□□ -1.6
VPS52-222ENST00000495981 DHX36Q9H2U1 1008 aaKnown RBP5.07□□□□□ -1.6
VPS52-222ENST00000495981 SEMA6CQ9H3T2 930 aa5.07□□□□□ -1.6
VPS52-222ENST00000495981 SLC28A3Q9HAS3 691 aa5.07□□□□□ -1.6
VPS52-222ENST00000495981 AS3MTQ9HBK9 375 aa5.07□□□□□ -1.6
VPS52-222ENST00000495981 GPRC5CQ9NQ84 441 aa5.07□□□□□ -1.6
VPS52-222ENST00000495981 SPTLC3Q9NUV7 552 aa5.07□□□□□ -1.6
VPS52-222ENST00000495981 OBP2AQ9NY56 170 aa5.07□□□□□ -1.6
VPS52-222ENST00000495981 RAI14Q9P0K7 980 aa5.07□□□□□ -1.6
VPS52-222ENST00000495981 PI4KBQ9UBF8 816 aa5.07□□□□□ -1.6
VPS52-222ENST00000495981 B4GALT6Q9UBX8 382 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms