RNA–Protein interactions for RNA: ENST00000495817.1

CCDC39-207, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 1,047 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-207ENST00000495817 TIFAQ96CG3 184 aa7.45□□□□□ -1.22
CCDC39-207ENST00000495817 GPR20Q99678 358 aa7.45□□□□□ -1.22
CCDC39-207ENST00000495817 FDXACB1Q9BRP7 624 aaPredicted RBP7.45□□□□□ -1.22
CCDC39-207ENST00000495817 IL23AQ9NPF7 189 aa7.45□□□□□ -1.22
CCDC39-207ENST00000495817 DDX20Q9UHI6 824 aaKnown RBP7.45□□□□□ -1.22
CCDC39-207ENST00000495817 H3BML4 177 aa7.44□□□□□ -1.22
CCDC39-207ENST00000495817 HTRA2O43464 458 aaPredicted RBP7.44□□□□□ -1.22
CCDC39-207ENST00000495817 PHKG2P15735 406 aa7.44□□□□□ -1.22
CCDC39-207ENST00000495817 EDNRBP24530 442 aa7.44□□□□□ -1.22
CCDC39-207ENST00000495817 KRTAP10-2P60368 255 aa7.44□□□□□ -1.22
CCDC39-207ENST00000495817 SAFB2Q14151 953 aaKnown RBP eCLIP7.44□□□□□ -1.22
CCDC39-207ENST00000495817 R3HDM1Q15032 1099 aaKnown RBP7.44□□□□□ -1.22
CCDC39-207ENST00000495817 PRKD1Q15139 912 aaPredicted RBP7.44□□□□□ -1.22
CCDC39-207ENST00000495817 PPP4R4Q6NUP7 873 aa7.44□□□□□ -1.22
CCDC39-207ENST00000495817 ZNF585AQ6P3V2 769 aa7.44□□□□□ -1.22
CCDC39-207ENST00000495817 DBX2Q6ZNG2 339 aa7.44□□□□□ -1.22
CCDC39-207ENST00000495817 GRAMD1CQ8IYS0 662 aa7.44□□□□□ -1.22
CCDC39-207ENST00000495817 FAM43AQ8N2R8 423 aa7.44□□□□□ -1.22
CCDC39-207ENST00000495817 NRG4Q8WWG1 115 aa7.44□□□□□ -1.22
CCDC39-207ENST00000495817 GPHA2Q96T91 129 aa7.44□□□□□ -1.22
CCDC39-207ENST00000495817 AGO3Q9H9G7 860 aaKnown RBP7.44□□□□□ -1.22
CCDC39-207ENST00000495817 DDX21Q9NR30 783 aaKnown RBP eCLIP7.44□□□□□ -1.22
CCDC39-207ENST00000495817 RBM12Q9NTZ6 932 aaKnown RBP7.44□□□□□ -1.22
CCDC39-207ENST00000495817 LIMCH1Q9UPQ0 1083 aa7.44□□□□□ -1.22
CCDC39-207ENST00000495817 CCDC154A6NI56 674 aa7.43□□□□□ -1.22
CCDC39-207ENST00000495817 LY86O95711 162 aa7.43□□□□□ -1.22
CCDC39-207ENST00000495817 GSPT1P15170 499 aaKnown RBP7.43□□□□□ -1.22
CCDC39-207ENST00000495817 MSX2P35548 267 aaPredicted RBP7.43□□□□□ -1.22
CCDC39-207ENST00000495817 WNT3AP56704 352 aa7.43□□□□□ -1.22
CCDC39-207ENST00000495817 MGAT2Q10469 447 aa7.43□□□□□ -1.22
CCDC39-207ENST00000495817 FOXL1Q12952 345 aa7.43□□□□□ -1.22
CCDC39-207ENST00000495817 PGS1Q32NB8 556 aa7.43□□□□□ -1.22
CCDC39-207ENST00000495817 MAMDC4Q6UXC1 1216 aa7.43□□□□□ -1.22
CCDC39-207ENST00000495817 SAMD3Q8N6K7 520 aa7.43□□□□□ -1.22
CCDC39-207ENST00000495817 PJA1Q8NG27 643 aa7.43□□□□□ -1.22
CCDC39-207ENST00000495817 HDAC10Q969S8 669 aa7.43□□□□□ -1.22
CCDC39-207ENST00000495817 RPL10LQ96L21 214 aaKnown RBP7.43□□□□□ -1.22
CCDC39-207ENST00000495817 ACO2Q99798 780 aaKnown RBP7.43□□□□□ -1.22
CCDC39-207ENST00000495817 FAM204AQ9H8W3 233 aa7.43□□□□□ -1.22
CCDC39-207ENST00000495817 DNM3Q9UQ16 869 aa7.43□□□□□ -1.22
CCDC39-207ENST00000495817 MYRFQ9Y2G1 1151 aa7.43□□□□□ -1.22
CCDC39-207ENST00000495817 CFAP20Q9Y6A4 193 aaKnown RBP7.43□□□□□ -1.22
CCDC39-207ENST00000495817 A0A1W2PR48 441 aa7.42□□□□□ -1.22
CCDC39-207ENST00000495817 ANO9A1A5B4 782 aa7.42□□□□□ -1.22
CCDC39-207ENST00000495817 FAM171A2A8MVW0 826 aa7.42□□□□□ -1.22
CCDC39-207ENST00000495817 CYP27B1O15528 508 aa7.42□□□□□ -1.22
CCDC39-207ENST00000495817 ALDH1A2O94788 518 aa7.42□□□□□ -1.22
CCDC39-207ENST00000495817 HRGP04196 525 aa7.42□□□□□ -1.22
CCDC39-207ENST00000495817 ACO1P21399 889 aaKnown RBP7.42□□□□□ -1.22
CCDC39-207ENST00000495817 PPP3CAQ08209 521 aa7.42□□□□□ -1.22
CCDC39-207ENST00000495817 MGAT5Q09328 741 aa7.42□□□□□ -1.22
CCDC39-207ENST00000495817 BIRC2Q13490 618 aa7.42□□□□□ -1.22
CCDC39-207ENST00000495817 GALEQ14376 348 aa7.42□□□□□ -1.22
CCDC39-207ENST00000495817 CDSNQ15517 529 aa7.42□□□□□ -1.22
CCDC39-207ENST00000495817 DENND1CQ8IV53 801 aa7.42□□□□□ -1.22
CCDC39-207ENST00000495817 ZBTB34Q8NCN2 500 aa7.42□□□□□ -1.22
CCDC39-207ENST00000495817 GPR156Q8NFN8 814 aa7.42□□□□□ -1.22
CCDC39-207ENST00000495817 SVIPQ8NHG7 77 aa7.42□□□□□ -1.22
CCDC39-207ENST00000495817 PMM1Q92871 262 aa7.42□□□□□ -1.22
CCDC39-207ENST00000495817 SLC39A13Q96H72 371 aa7.42□□□□□ -1.22
CCDC39-207ENST00000495817 TCF25Q9BQ70 676 aa7.42□□□□□ -1.22
CCDC39-207ENST00000495817 INTUQ9ULD6 942 aa7.42□□□□□ -1.22
CCDC39-207ENST00000495817 IL12RB1P42701 662 aa7.41□□□□□ -1.22
CCDC39-207ENST00000495817 USP14P54578 494 aa7.41□□□□□ -1.22
CCDC39-207ENST00000495817 CD69Q07108 199 aa7.41□□□□□ -1.22
CCDC39-207ENST00000495817 PPP4R3AQ6IN85 833 aa7.41□□□□□ -1.22
CCDC39-207ENST00000495817 MFSD5Q6N075 450 aa7.41□□□□□ -1.22
CCDC39-207ENST00000495817 MIGA2Q7L4E1 593 aa7.41□□□□□ -1.22
CCDC39-207ENST00000495817 TAS1R1Q7RTX1 841 aa7.41□□□□□ -1.22
CCDC39-207ENST00000495817 C11orf96Q7Z7L8 435 aa7.41□□□□□ -1.22
CCDC39-207ENST00000495817 CMTM4Q8IZR5 234 aa7.41□□□□□ -1.22
CCDC39-207ENST00000495817 ANKRD35Q8N283 1001 aa7.41□□□□□ -1.22
CCDC39-207ENST00000495817 D2HGDHQ8N465 521 aa7.41□□□□□ -1.22
CCDC39-207ENST00000495817 PIK3C3Q8NEB9 887 aa7.41□□□□□ -1.22
CCDC39-207ENST00000495817 RIN2Q8WYP3 895 aaPredicted RBP7.41□□□□□ -1.22
CCDC39-207ENST00000495817 RPS6KC1Q96S38 1066 aa7.41□□□□□ -1.22
CCDC39-207ENST00000495817 ADOQ96SZ5 270 aa7.41□□□□□ -1.22
CCDC39-207ENST00000495817 PSMD1Q99460 953 aa7.41□□□□□ -1.22
CCDC39-207ENST00000495817 CHMP4AQ9BY43 222 aa7.41□□□□□ -1.22
CCDC39-207ENST00000495817 TMEM60Q9H2L4 133 aa7.41□□□□□ -1.22
CCDC39-207ENST00000495817 DMRT3Q9NQL9 472 aa7.41□□□□□ -1.22
CCDC39-207ENST00000495817 RPTORQ8N122 1335 aa7.41□□□□□ -1.22
CCDC39-207ENST00000495817 UBE2QL1A1L167 161 aa7.4□□□□□ -1.22
CCDC39-207ENST00000495817 TPD52L2O43399 206 aaKnown RBP7.4□□□□□ -1.22
CCDC39-207ENST00000495817 PHF2O75151 1096 aa7.4□□□□□ -1.22
CCDC39-207ENST00000495817 TMEM127O75204 238 aa7.4□□□□□ -1.22
CCDC39-207ENST00000495817 TUSC2O75896 110 aa7.4□□□□□ -1.22
CCDC39-207ENST00000495817 ZBED1O96006 694 aa7.4□□□□□ -1.22
CCDC39-207ENST00000495817 RPLP2P05387 115 aaKnown RBP7.4□□□□□ -1.22
CCDC39-207ENST00000495817 LTA4HP09960 611 aaKnown RBP7.4□□□□□ -1.22
CCDC39-207ENST00000495817 FXR1P51114 621 aaKnown RBP eCLIP7.4□□□□□ -1.22
CCDC39-207ENST00000495817 NPEPPSP55786 919 aa7.4□□□□□ -1.22
CCDC39-207ENST00000495817 SAFBQ15424 915 aaKnown RBP eCLIP7.4□□□□□ -1.22
CCDC39-207ENST00000495817 C19orf54Q5BKX5 351 aa7.4□□□□□ -1.22
CCDC39-207ENST00000495817 SYCP2LQ5T4T6 812 aa7.4□□□□□ -1.22
CCDC39-207ENST00000495817 FAM111BQ6SJ93 734 aa7.4□□□□□ -1.22
CCDC39-207ENST00000495817 Q6ZSN1 163 aa7.4□□□□□ -1.22
CCDC39-207ENST00000495817 OVCH2Q7RTZ1 564 aa7.4□□□□□ -1.22
CCDC39-207ENST00000495817 CAMKK1Q8N5S9 505 aa7.4□□□□□ -1.22
CCDC39-207ENST00000495817 KRTAP9-3Q9BYQ3 159 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms