RNA–Protein interactions for RNA: ENST00000494243.5

TTC3-224, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 861 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-224ENST00000494243 RBM25P49756 843 aaKnown RBP26.39■■□□□ 1.82
TTC3-224ENST00000494243 PRPF4BQ13523 1007 aaKnown RBP26.39■■□□□ 1.82
TTC3-224ENST00000494243 TDGQ13569 410 aa26.39■■□□□ 1.82
TTC3-224ENST00000494243 HSP90AA2PQ14568 343 aaPredicted RBP26.39■■□□□ 1.82
TTC3-224ENST00000494243 NOSTRINQ8IVI9 506 aa26.39■■□□□ 1.82
TTC3-224ENST00000494243 RIN2Q8WYP3 895 aaPredicted RBP26.39■■□□□ 1.82
TTC3-224ENST00000494243 POLD4Q9HCU8 107 aa26.39■■□□□ 1.82
TTC3-224ENST00000494243 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP26.39■■□□□ 1.82
TTC3-224ENST00000494243 FAM86C1Q9NVL1 165 aa26.39■■□□□ 1.82
TTC3-224ENST00000494243 SNTG2Q9NY99 539 aa26.39■■□□□ 1.82
TTC3-224ENST00000494243 ACKR2O00590 384 aa26.38■■□□□ 1.81
TTC3-224ENST00000494243 GALR2O43603 387 aaPredicted RBP26.38■■□□□ 1.81
TTC3-224ENST00000494243 TADA2AO75478 443 aa26.38■■□□□ 1.81
TTC3-224ENST00000494243 PRKCBP05771 671 aa26.38■■□□□ 1.81
TTC3-224ENST00000494243 RPL17P18621 184 aaKnown RBP26.38■■□□□ 1.81
TTC3-224ENST00000494243 NAMPTP43490 491 aa26.38■■□□□ 1.81
TTC3-224ENST00000494243 FXR2P51116 673 aaKnown RBP eCLIP26.38■■□□□ 1.811e-7■■■□□ 19.2
TTC3-224ENST00000494243 TUSC3Q13454 348 aa26.38■■□□□ 1.81
TTC3-224ENST00000494243 NBR1Q14596 966 aa26.38■■□□□ 1.81
TTC3-224ENST00000494243 NAB2Q15742 525 aa26.38■■□□□ 1.81
TTC3-224ENST00000494243 MAPK6Q16659 721 aa26.38■■□□□ 1.81
TTC3-224ENST00000494243 ELMSAN1Q6PJG2 1045 aa26.38■■□□□ 1.81
TTC3-224ENST00000494243 PLEKHA4Q9H4M7 779 aa26.38■■□□□ 1.81
TTC3-224ENST00000494243 H0Y858 1186 aa26.37■■□□□ 1.81
TTC3-224ENST00000494243 RECQL4O94761 1208 aa26.37■■□□□ 1.81
TTC3-224ENST00000494243 TRAPPC10P48553 1259 aa26.37■■□□□ 1.81
TTC3-224ENST00000494243 HMGN5P82970 282 aaKnown RBP26.37■■□□□ 1.81
TTC3-224ENST00000494243 RTP2Q5QGT7 225 aa26.37■■□□□ 1.81
TTC3-224ENST00000494243 EEF1DP3Q658K8 133 aa26.37■■□□□ 1.81
TTC3-224ENST00000494243 ASTLQ6HA08 431 aaPredicted RBP26.37■■□□□ 1.81
TTC3-224ENST00000494243 GLYCTKQ8IVS8 523 aa26.37■■□□□ 1.81
TTC3-224ENST00000494243 SMG7Q92540 1137 aaKnown RBP26.37■■□□□ 1.81
TTC3-224ENST00000494243 ZSCAN31Q96LW9 406 aaPredicted RBP26.37■■□□□ 1.81
TTC3-224ENST00000494243 NT5C3AQ9H0P0 336 aa26.37■■□□□ 1.81
TTC3-224ENST00000494243 CLUHO75153 1309 aa26.37■■□□□ 1.81
TTC3-224ENST00000494243 CASTOR2A6NHX0 329 aa26.36■■□□□ 1.81
TTC3-224ENST00000494243 CCT6AP40227 531 aaKnown RBP26.36■■□□□ 1.81
TTC3-224ENST00000494243 PRSS55Q6UWB4 352 aaPredicted RBP26.36■■□□□ 1.81
TTC3-224ENST00000494243 DEPTORQ8TB45 409 aa26.36■■□□□ 1.81
TTC3-224ENST00000494243 KIFC3Q9BVG8 833 aa26.36■■□□□ 1.81
TTC3-224ENST00000494243 IRF2BPLQ9H1B7 796 aa26.36■■□□□ 1.81
TTC3-224ENST00000494243 BHMT2Q9H2M3 363 aa26.36■■□□□ 1.81
TTC3-224ENST00000494243 IGSF9Q9P2J2 1179 aa26.36■■□□□ 1.81
TTC3-224ENST00000494243 DUSP12Q9UNI6 340 aa26.36■■□□□ 1.81
TTC3-224ENST00000494243 SF3B1O75533 1304 aaKnown RBP eCLIP26.36■■□□□ 1.813e-7■■■■■ 46.9
TTC3-224ENST00000494243 MTCL1Q9Y4B5 1905 aaKnown RBP26.35■■□□□ 1.81
TTC3-224ENST00000494243 KIF4AO95239 1232 aa26.35■■□□□ 1.81
TTC3-224ENST00000494243 THP07101 528 aa26.35■■□□□ 1.81
TTC3-224ENST00000494243 LIG1P18858 919 aa26.35■■□□□ 1.81
TTC3-224ENST00000494243 TOB1P50616 345 aaPredicted RBP26.35■■□□□ 1.81
TTC3-224ENST00000494243 CLCN5P51795 746 aa26.35■■□□□ 1.81
TTC3-224ENST00000494243 PPP2R5AQ15172 486 aa26.35■■□□□ 1.81
TTC3-224ENST00000494243 HAUS3Q68CZ6 603 aa26.35■■□□□ 1.81
TTC3-224ENST00000494243 HASPINQ8TF76 798 aa26.35■■□□□ 1.81
TTC3-224ENST00000494243 ATOH1Q92858 354 aaPredicted RBP26.35■■□□□ 1.81
TTC3-224ENST00000494243 MYADMQ96S97 322 aa26.35■■□□□ 1.81
TTC3-224ENST00000494243 LRWD1Q9UFC0 647 aa26.35■■□□□ 1.81
TTC3-224ENST00000494243 CACNA1HO95180 2353 aa26.35■■□□□ 1.81
TTC3-224ENST00000494243 NPR3P17342 541 aa26.34■■□□□ 1.81
TTC3-224ENST00000494243 U2AF2P26368 475 aaKnown RBP eCLIP26.34■■□□□ 1.817e-8■■■□□ 15.2
TTC3-224ENST00000494243 GBP2P32456 591 aaPredicted RBP26.34■■□□□ 1.81
TTC3-224ENST00000494243 CREMQ03060 361 aa26.34■■□□□ 1.81
TTC3-224ENST00000494243 PDIA5Q14554 519 aa26.34■■□□□ 1.81
TTC3-224ENST00000494243 TMEM132AQ24JP5 1023 aa26.34■■□□□ 1.81
TTC3-224ENST00000494243 NT5DC1Q5TFE4 455 aa26.34■■□□□ 1.81
TTC3-224ENST00000494243 CWF19L1Q69YN2 538 aaKnown RBP26.34■■□□□ 1.81
TTC3-224ENST00000494243 RSAD2Q8WXG1 361 aa26.34■■□□□ 1.81
TTC3-224ENST00000494243 STAMQ92783 540 aa26.34■■□□□ 1.81
TTC3-224ENST00000494243 CLSTN3Q9BQT9 956 aa26.34■■□□□ 1.81
TTC3-224ENST00000494243 ADPGKQ9BRR6 497 aa26.34■■□□□ 1.81
TTC3-224ENST00000494243 PRKD2Q9BZL6 878 aa26.34■■□□□ 1.81
TTC3-224ENST00000494243 MFSD1Q9H3U5 465 aa26.34■■□□□ 1.81
TTC3-224ENST00000494243 SH2B1Q9NRF2 756 aaPredicted RBP26.34■■□□□ 1.81
TTC3-224ENST00000494243 ZDHHC7Q9NXF8 308 aa26.34■■□□□ 1.81
TTC3-224ENST00000494243 EPS15L1Q9UBC2 864 aa26.34■■□□□ 1.81
TTC3-224ENST00000494243 KIAA1024Q9UPX6 916 aa26.34■■□□□ 1.81
TTC3-224ENST00000494243 GNL2Q13823 731 aaKnown RBP26.33■■□□□ 1.81
TTC3-224ENST00000494243 FAM171A1Q5VUB5 890 aa26.33■■□□□ 1.81
TTC3-224ENST00000494243 IGSF22Q8N9C0 903 aa26.33■■□□□ 1.81
TTC3-224ENST00000494243 FAM184AQ8NB25 1140 aa26.33■■□□□ 1.81
TTC3-224ENST00000494243 LNX1Q8TBB1 728 aaPredicted RBP26.33■■□□□ 1.81
TTC3-224ENST00000494243 PIK3R5Q8WYR1 880 aa26.33■■□□□ 1.81
TTC3-224ENST00000494243 TTPALQ9BTX7 342 aa26.33■■□□□ 1.81
TTC3-224ENST00000494243 NOL7Q9UMY1 257 aaKnown RBP26.33■■□□□ 1.81
TTC3-224ENST00000494243 GDAQ9Y2T3 454 aa26.33■■□□□ 1.81
TTC3-224ENST00000494243 NARSO43776 548 aaKnown RBP26.32■■□□□ 1.8
TTC3-224ENST00000494243 ZMYND10O75800 440 aa26.32■■□□□ 1.8
TTC3-224ENST00000494243 IGFBP6P24592 240 aaPredicted RBP26.32■■□□□ 1.8
TTC3-224ENST00000494243 EFNA5P52803 228 aa26.32■■□□□ 1.8
TTC3-224ENST00000494243 PTGDRQ13258 359 aa26.32■■□□□ 1.8
TTC3-224ENST00000494243 KIFAP3Q92845 792 aa26.32■■□□□ 1.8
TTC3-224ENST00000494243 IFT74Q96LB3 600 aa26.32■■□□□ 1.8
TTC3-224ENST00000494243 PIDD1Q9HB75 910 aa26.32■■□□□ 1.8
TTC3-224ENST00000494243 DDX19AQ9NUU7 478 aaKnown RBP26.32■■□□□ 1.8
TTC3-224ENST00000494243 PCDHB6Q9Y5E3 794 aa26.32■■□□□ 1.8
TTC3-224ENST00000494243 ATF7IP2Q5U623 682 aa26.31■■□□□ 1.8
TTC3-224ENST00000494243 CEP57Q86XR8 500 aa26.31■■□□□ 1.8
TTC3-224ENST00000494243 FLCNQ8NFG4 579 aa26.31■■□□□ 1.8
TTC3-224ENST00000494243 DOCK8Q8NF50 2099 aa26.3■■□□□ 1.8
TTC3-224ENST00000494243 ADAM12O43184 909 aa26.3■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms