RNA–Protein interactions for RNA: ENST00000494195.1

HMGB3P14-201, Transcript of high mobility group box 3 pseudogene 14, humanhuman

BASIC

Gene HMGB3P14, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P14-201ENST00000494195 TTF1Q15361 905 aaPredicted RBP9.43□□□□□ -0.9
HMGB3P14-201ENST00000494195 NAIF1Q69YI7 327 aaPredicted RBP9.43□□□□□ -0.9
HMGB3P14-201ENST00000494195 MIGA2Q7L4E1 593 aa9.43□□□□□ -0.9
HMGB3P14-201ENST00000494195 GPRIN1Q7Z2K8 1008 aa9.43□□□□□ -0.9
HMGB3P14-201ENST00000494195 HDAC10Q969S8 669 aa9.43□□□□□ -0.9
HMGB3P14-201ENST00000494195 COA7Q96BR5 231 aa9.43□□□□□ -0.9
HMGB3P14-201ENST00000494195 MNTQ99583 582 aa9.43□□□□□ -0.9
HMGB3P14-201ENST00000494195 CPEB1Q9BZB8 566 aaKnown RBP9.43□□□□□ -0.9
HMGB3P14-201ENST00000494195 AASDHPPTQ9NRN7 309 aa9.43□□□□□ -0.9
HMGB3P14-201ENST00000494195 LUC7L2Q9Y383 392 aaKnown RBP9.43□□□□□ -0.9
HMGB3P14-201ENST00000494195 KLRG2A4D1S0 409 aaPredicted RBP9.42□□□□□ -0.9
HMGB3P14-201ENST00000494195 PRR5-ARHGAP8B1AHC4 643 aa9.42□□□□□ -0.9
HMGB3P14-201ENST00000494195 ZRANB2O95218 330 aaKnown RBP eCLIP9.42□□□□□ -0.9
HMGB3P14-201ENST00000494195 HK1P19367 917 aa9.42□□□□□ -0.9
HMGB3P14-201ENST00000494195 PTH1RQ03431 593 aa9.42□□□□□ -0.9
HMGB3P14-201ENST00000494195 USP39Q53GS9 565 aaKnown RBP9.42□□□□□ -0.9
HMGB3P14-201ENST00000494195 ANKS6Q68DC2 871 aa9.42□□□□□ -0.9
HMGB3P14-201ENST00000494195 CMTR2Q8IYT2 770 aaKnown RBP9.42□□□□□ -0.9
HMGB3P14-201ENST00000494195 FBXO18Q8NFZ0 1043 aa9.42□□□□□ -0.9
HMGB3P14-201ENST00000494195 SH3RF3Q8TEJ3 882 aaPredicted RBP9.42□□□□□ -0.9
HMGB3P14-201ENST00000494195 CASKIN2Q8WXE0 1202 aa9.42□□□□□ -0.9
HMGB3P14-201ENST00000494195 KCNH6Q9H252 994 aa9.42□□□□□ -0.9
HMGB3P14-201ENST00000494195 LDAHQ9H6V9 325 aa9.42□□□□□ -0.9
HMGB3P14-201ENST00000494195 TMEM140Q9NV12 185 aa9.42□□□□□ -0.9
HMGB3P14-201ENST00000494195 MOCS1Q9NZB8 636 aa9.42□□□□□ -0.9
HMGB3P14-201ENST00000494195 IPPQ9Y573 584 aa9.42□□□□□ -0.9
HMGB3P14-201ENST00000494195 TBKBP1A7MCY6 615 aa9.41□□□□□ -0.9
HMGB3P14-201ENST00000494195 PJA2O43164 708 aa9.41□□□□□ -0.9
HMGB3P14-201ENST00000494195 HTRA2O43464 458 aaPredicted RBP9.41□□□□□ -0.9
HMGB3P14-201ENST00000494195 C1orf210Q8IVY1 113 aa9.41□□□□□ -0.9
HMGB3P14-201ENST00000494195 RHOT1Q8IXI2 618 aa9.41□□□□□ -0.9
HMGB3P14-201ENST00000494195 MIER2Q8N344 545 aa9.41□□□□□ -0.9
HMGB3P14-201ENST00000494195 CPA6Q8N4T0 437 aa9.41□□□□□ -0.9
HMGB3P14-201ENST00000494195 CCHCR1Q8TD31 782 aa9.41□□□□□ -0.9
HMGB3P14-201ENST00000494195 EXTL1Q92935 676 aa9.41□□□□□ -0.9
HMGB3P14-201ENST00000494195 HOOK2Q96ED9 719 aa9.41□□□□□ -0.9
HMGB3P14-201ENST00000494195 CSRNP2Q9H175 543 aa9.41□□□□□ -0.9
HMGB3P14-201ENST00000494195 SERPINB13Q9UIV8 391 aa9.41□□□□□ -0.9
HMGB3P14-201ENST00000494195 AJAP1Q9UKB5 411 aaPredicted RBP9.41□□□□□ -0.9
HMGB3P14-201ENST00000494195 LIMCH1Q9UPQ0 1083 aa9.41□□□□□ -0.9
HMGB3P14-201ENST00000494195 MYRFQ9Y2G1 1151 aa9.41□□□□□ -0.9
HMGB3P14-201ENST00000494195 XDHP47989 1333 aa9.4□□□□□ -0.9
HMGB3P14-201ENST00000494195 CCDC154A6NI56 674 aa9.4□□□□□ -0.9
HMGB3P14-201ENST00000494195 MCL1Q07820 350 aa9.4□□□□□ -0.9
HMGB3P14-201ENST00000494195 VPS72Q15906 364 aa9.4□□□□□ -0.9
HMGB3P14-201ENST00000494195 BMT2Q1RMZ1 405 aa9.4□□□□□ -0.9
HMGB3P14-201ENST00000494195 UAP1L1Q3KQV9 507 aa9.4□□□□□ -0.9
HMGB3P14-201ENST00000494195 PLEKHG6Q3KR16 790 aa9.4□□□□□ -0.9
HMGB3P14-201ENST00000494195 NRN1LQ496H8 165 aa9.4□□□□□ -0.9
HMGB3P14-201ENST00000494195 RNF207Q6ZRF8 634 aa9.4□□□□□ -0.9
HMGB3P14-201ENST00000494195 TMPRSS6Q8IU80 811 aa9.4□□□□□ -0.9
HMGB3P14-201ENST00000494195 IL17DQ8TAD2 202 aa9.4□□□□□ -0.9
HMGB3P14-201ENST00000494195 PGBD4Q96DM1 585 aa9.4□□□□□ -0.9
HMGB3P14-201ENST00000494195 TCF7L1Q9HCS4 588 aa9.4□□□□□ -0.9
HMGB3P14-201ENST00000494195 CXorf49A8MYA2 514 aaPredicted RBP9.39□□□□□ -0.91
HMGB3P14-201ENST00000494195 WNT10BO00744 389 aa9.39□□□□□ -0.91
HMGB3P14-201ENST00000494195 PLSCR1O15162 318 aa9.39□□□□□ -0.91
HMGB3P14-201ENST00000494195 TEX33O43247 280 aa9.39□□□□□ -0.91
HMGB3P14-201ENST00000494195 GPR32O75388 356 aa9.39□□□□□ -0.91
HMGB3P14-201ENST00000494195 SNRPA1P09661 255 aaKnown RBP9.39□□□□□ -0.91
HMGB3P14-201ENST00000494195 INSRRP14616 1297 aa9.39□□□□□ -0.91
HMGB3P14-201ENST00000494195 EDNRBP24530 442 aa9.39□□□□□ -0.91
HMGB3P14-201ENST00000494195 AFMIDQ63HM1 303 aa9.39□□□□□ -0.91
HMGB3P14-201ENST00000494195 DRICH1Q6PGQ1 229 aaPredicted RBP9.39□□□□□ -0.91
HMGB3P14-201ENST00000494195 SPRED1Q7Z699 444 aa9.39□□□□□ -0.91
HMGB3P14-201ENST00000494195 SLC35B2Q8TB61 432 aa9.39□□□□□ -0.91
HMGB3P14-201ENST00000494195 STON2Q8WXE9 905 aa9.39□□□□□ -0.91
HMGB3P14-201ENST00000494195 SPON1Q9HCB6 807 aa9.39□□□□□ -0.91
HMGB3P14-201ENST00000494195 AMY1AP04745 511 aa9.38□□□□□ -0.91
HMGB3P14-201ENST00000494195 RAP2AP10114 183 aa9.38□□□□□ -0.91
HMGB3P14-201ENST00000494195 CLRN1P58418 232 aa9.38□□□□□ -0.91
HMGB3P14-201ENST00000494195 C3orf36Q3SXR2 165 aa9.38□□□□□ -0.91
HMGB3P14-201ENST00000494195 RRP12Q5JTH9 1297 aaKnown RBP9.38□□□□□ -0.91
HMGB3P14-201ENST00000494195 ODR4Q5SWX8 454 aa9.38□□□□□ -0.91
HMGB3P14-201ENST00000494195 ZFP28Q8NHY6 868 aa9.38□□□□□ -0.91
HMGB3P14-201ENST00000494195 TFAP2CQ92754 450 aa9.38□□□□□ -0.91
HMGB3P14-201ENST00000494195 ZNF703Q9H7S9 590 aaPredicted RBP9.38□□□□□ -0.91
HMGB3P14-201ENST00000494195 PCDHA13Q9Y5I0 950 aa9.38□□□□□ -0.91
HMGB3P14-201ENST00000494195 E2F8A0AVK6 867 aa9.37□□□□□ -0.91
HMGB3P14-201ENST00000494195 SGTAO43765 313 aa9.37□□□□□ -0.91
HMGB3P14-201ENST00000494195 FPR1P21462 350 aa9.37□□□□□ -0.91
HMGB3P14-201ENST00000494195 MGAT1P26572 445 aa9.37□□□□□ -0.91
HMGB3P14-201ENST00000494195 PCSK1P29120 753 aa9.37□□□□□ -0.91
HMGB3P14-201ENST00000494195 ALDH1A3P47895 512 aa9.37□□□□□ -0.91
HMGB3P14-201ENST00000494195 EPHB1P54762 984 aa9.37□□□□□ -0.91
HMGB3P14-201ENST00000494195 CDC42EP1Q00587 391 aa9.37□□□□□ -0.91
HMGB3P14-201ENST00000494195 MTM1Q13496 603 aa9.37□□□□□ -0.91
HMGB3P14-201ENST00000494195 CSRP2Q16527 193 aa9.37□□□□□ -0.91
HMGB3P14-201ENST00000494195 ZXDCQ2QGD7 858 aaPredicted RBP9.37□□□□□ -0.91
HMGB3P14-201ENST00000494195 OTUD7BQ6GQQ9 843 aa9.37□□□□□ -0.91
HMGB3P14-201ENST00000494195 EFCAB12Q6NXP0 572 aa9.37□□□□□ -0.91
HMGB3P14-201ENST00000494195 ZGPATQ8N5A5 531 aaKnown RBP9.37□□□□□ -0.91
HMGB3P14-201ENST00000494195 HSPBAP1Q96EW2 488 aa9.37□□□□□ -0.91
HMGB3P14-201ENST00000494195 MRI1Q9BV20 369 aa9.37□□□□□ -0.91
HMGB3P14-201ENST00000494195 TDP1Q9NUW8 608 aa9.37□□□□□ -0.91
HMGB3P14-201ENST00000494195 IP6K2Q9UHH9 426 aa9.37□□□□□ -0.91
HMGB3P14-201ENST00000494195 ACTL7AQ9Y615 435 aa9.37□□□□□ -0.91
HMGB3P14-201ENST00000494195 MYBBP1AQ9BQG0 1328 aaKnown RBP9.36□□□□□ -0.91
HMGB3P14-201ENST00000494195 ABLIM3O94929 683 aa9.36□□□□□ -0.91
HMGB3P14-201ENST00000494195 IL33O95760 270 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms