RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 C2CD2LO14523 706 aa13.89□□□□□ -0.19
HSPG2-212ENST00000493940 N4BP3O15049 544 aa13.89□□□□□ -0.19
HSPG2-212ENST00000493940 DCXO43602 365 aa13.89□□□□□ -0.19
HSPG2-212ENST00000493940 PLA2G4BP0C869 781 aa13.89□□□□□ -0.19
HSPG2-212ENST00000493940 KARSQ15046 597 aaKnown RBP13.89□□□□□ -0.19
HSPG2-212ENST00000493940 ATF7IP2Q5U623 682 aa13.89□□□□□ -0.19
HSPG2-212ENST00000493940 BRAPQ7Z569 592 aa13.89□□□□□ -0.19
HSPG2-212ENST00000493940 ALYREFQ86V81 257 aaKnown RBP13.89□□□□□ -0.19
HSPG2-212ENST00000493940 RNF135Q8IUD6 432 aa13.89□□□□□ -0.19
HSPG2-212ENST00000493940 RSPH1Q8WYR4 309 aa13.89□□□□□ -0.19
HSPG2-212ENST00000493940 EPSTI1Q96J88 318 aa13.89□□□□□ -0.19
HSPG2-212ENST00000493940 IFT74Q96LB3 600 aa13.89□□□□□ -0.19
HSPG2-212ENST00000493940 CLIC6Q96NY7 704 aa13.89□□□□□ -0.19
HSPG2-212ENST00000493940 NTPCRQ9BSD7 190 aaKnown RBP13.89□□□□□ -0.19
HSPG2-212ENST00000493940 TARS2Q9BW92 718 aaKnown RBP13.89□□□□□ -0.19
HSPG2-212ENST00000493940 MUTYHQ9UIF7 546 aa13.89□□□□□ -0.19
HSPG2-212ENST00000493940 FAM50BQ9Y247 325 aa13.89□□□□□ -0.19
HSPG2-212ENST00000493940 SOD2P04179 222 aa13.88□□□□□ -0.19
HSPG2-212ENST00000493940 PROZP22891 400 aa13.88□□□□□ -0.19
HSPG2-212ENST00000493940 SP100P23497 879 aaPredicted RBP13.88□□□□□ -0.19
HSPG2-212ENST00000493940 GUCY2CP25092 1073 aa13.88□□□□□ -0.19
HSPG2-212ENST00000493940 MARCKSP29966 332 aaPredicted RBP13.88□□□□□ -0.19
HSPG2-212ENST00000493940 CLCN4P51793 760 aa13.88□□□□□ -0.19
HSPG2-212ENST00000493940 DHX8Q14562 1220 aaKnown RBP13.88□□□□□ -0.19
HSPG2-212ENST00000493940 MCM6Q14566 821 aa13.88□□□□□ -0.19
HSPG2-212ENST00000493940 PPP2R5AQ15172 486 aa13.88□□□□□ -0.19
HSPG2-212ENST00000493940 SEZ6Q53EL9 994 aa13.88□□□□□ -0.19
HSPG2-212ENST00000493940 HASPINQ8TF76 798 aa13.88□□□□□ -0.19
HSPG2-212ENST00000493940 RPGRIP1Q96KN7 1286 aa13.88□□□□□ -0.19
HSPG2-212ENST00000493940 HERC2P3Q9BVR0 1158 aa13.88□□□□□ -0.19
HSPG2-212ENST00000493940 CDT1Q9H211 546 aa13.88□□□□□ -0.19
HSPG2-212ENST00000493940 KCNH6Q9H252 994 aa13.88□□□□□ -0.19
HSPG2-212ENST00000493940 POMKQ9H5K3 350 aa13.88□□□□□ -0.19
HSPG2-212ENST00000493940 TMEM134Q9H6X4 195 aa13.88□□□□□ -0.19
HSPG2-212ENST00000493940 KMT5AQ9NQR1 393 aa13.88□□□□□ -0.19
HSPG2-212ENST00000493940 CHST7Q9NS84 486 aa13.88□□□□□ -0.19
HSPG2-212ENST00000493940 STK24Q9Y6E0 443 aa13.88□□□□□ -0.19
HSPG2-212ENST00000493940 SCN1AP35498 2009 aa13.88□□□□□ -0.19
HSPG2-212ENST00000493940 CASTOR2A6NHX0 329 aa13.87□□□□□ -0.19
HSPG2-212ENST00000493940 K7ELQ4 463 aaPredicted RBP13.87□□□□□ -0.19
HSPG2-212ENST00000493940 TEX28O15482 410 aa13.87□□□□□ -0.19
HSPG2-212ENST00000493940 SPATA31D3P0C874 917 aa13.87□□□□□ -0.19
HSPG2-212ENST00000493940 RPL17P18621 184 aaKnown RBP13.87□□□□□ -0.19
HSPG2-212ENST00000493940 PLCG1P19174 1290 aa13.87□□□□□ -0.19
HSPG2-212ENST00000493940 EFNA5P52803 228 aa13.87□□□□□ -0.19
HSPG2-212ENST00000493940 OSTNP61366 133 aa13.87□□□□□ -0.19
HSPG2-212ENST00000493940 CEBPZQ03701 1054 aaKnown RBP13.87□□□□□ -0.19
HSPG2-212ENST00000493940 SOX4Q06945 474 aaPredicted RBP13.87□□□□□ -0.19
HSPG2-212ENST00000493940 GRIK3Q13003 919 aa13.87□□□□□ -0.19
HSPG2-212ENST00000493940 CBX2Q14781 532 aaPredicted RBP13.87□□□□□ -0.19
HSPG2-212ENST00000493940 GLRA4Q5JXX5 417 aa13.87□□□□□ -0.19
HSPG2-212ENST00000493940 RARS2Q5T160 578 aaKnown RBP13.87□□□□□ -0.19
HSPG2-212ENST00000493940 ALKAL1Q6UXT8 129 aa13.87□□□□□ -0.19
HSPG2-212ENST00000493940 SPATA31D4Q6ZUB0 917 aa13.87□□□□□ -0.19
HSPG2-212ENST00000493940 ZBTB33Q86T24 672 aa13.87□□□□□ -0.19
HSPG2-212ENST00000493940 TMEM161BQ8NDZ6 487 aa13.87□□□□□ -0.19
HSPG2-212ENST00000493940 CASP10Q92851 521 aa13.87□□□□□ -0.19
HSPG2-212ENST00000493940 ZMAT2Q96NC0 199 aaKnown RBP13.87□□□□□ -0.19
HSPG2-212ENST00000493940 PHF7Q9BWX1 381 aaPredicted RBP13.87□□□□□ -0.19
HSPG2-212ENST00000493940 GOLGA2P5Q9HBQ8 144 aa13.87□□□□□ -0.19
HSPG2-212ENST00000493940 FBXO2Q9UK22 296 aaPredicted RBP13.87□□□□□ -0.19
HSPG2-212ENST00000493940 TNFSF13BQ9Y275 285 aa13.87□□□□□ -0.19
HSPG2-212ENST00000493940 KIF4AO95239 1232 aa13.86□□□□□ -0.19
HSPG2-212ENST00000493940 MAPTP10636 758 aaKnown RBP13.86□□□□□ -0.19
HSPG2-212ENST00000493940 TUSC3Q13454 348 aa13.86□□□□□ -0.19
HSPG2-212ENST00000493940 GIT2Q14161 759 aa13.86□□□□□ -0.19
HSPG2-212ENST00000493940 TMEM132AQ24JP5 1023 aa13.86□□□□□ -0.19
HSPG2-212ENST00000493940 RTP2Q5QGT7 225 aa13.86□□□□□ -0.19
HSPG2-212ENST00000493940 FUT10Q6P4F1 479 aa13.86□□□□□ -0.19
HSPG2-212ENST00000493940 TMC5Q6UXY8 1006 aa13.86□□□□□ -0.19
HSPG2-212ENST00000493940 GLYCTKQ8IVS8 523 aa13.86□□□□□ -0.19
HSPG2-212ENST00000493940 C3orf58Q8NDZ4 430 aa13.86□□□□□ -0.19
HSPG2-212ENST00000493940 INTS4Q96HW7 963 aaKnown RBP13.86□□□□□ -0.19
HSPG2-212ENST00000493940 AK8Q96MA6 479 aa13.86□□□□□ -0.19
HSPG2-212ENST00000493940 DRC1Q96MC2 740 aa13.86□□□□□ -0.19
HSPG2-212ENST00000493940 PPP1R10Q96QC0 940 aaKnown RBP13.86□□□□□ -0.19
HSPG2-212ENST00000493940 USP28Q96RU2 1077 aa13.86□□□□□ -0.19
HSPG2-212ENST00000493940 RPS6KC1Q96S38 1066 aa13.86□□□□□ -0.19
HSPG2-212ENST00000493940 FIZ1Q96SL8 496 aa13.86□□□□□ -0.19
HSPG2-212ENST00000493940 REEP2Q9BRK0 252 aa13.86□□□□□ -0.19
HSPG2-212ENST00000493940 COLEC11Q9BWP8 271 aa13.86□□□□□ -0.19
HSPG2-212ENST00000493940 IKZF4Q9H2S9 585 aa13.86□□□□□ -0.19
HSPG2-212ENST00000493940 ADAM7Q9H2U9 754 aa13.86□□□□□ -0.19
HSPG2-212ENST00000493940 RXFP1Q9HBX9 757 aa13.86□□□□□ -0.19
HSPG2-212ENST00000493940 ADAM28Q9UKQ2 775 aa13.86□□□□□ -0.19
HSPG2-212ENST00000493940 PHLPP2Q6ZVD8 1323 aa13.86□□□□□ -0.19
HSPG2-212ENST00000493940 MUC6Q6W4X9 2439 aa13.85□□□□□ -0.19
HSPG2-212ENST00000493940 ZMYM2Q9UBW7 1377 aa13.85□□□□□ -0.19
HSPG2-212ENST00000493940 A0A087X0B3 334 aa13.85□□□□□ -0.19
HSPG2-212ENST00000493940 ADAM12O43184 909 aa13.85□□□□□ -0.19
HSPG2-212ENST00000493940 THP07101 528 aa13.85□□□□□ -0.19
HSPG2-212ENST00000493940 PLS3P13797 630 aa13.85□□□□□ -0.19
HSPG2-212ENST00000493940 HOXB8P17481 243 aaPredicted RBP13.85□□□□□ -0.19
HSPG2-212ENST00000493940 KLRC2P26717 231 aa13.85□□□□□ -0.19
HSPG2-212ENST00000493940 LONP1P36776 959 aaKnown RBP13.85□□□□□ -0.19
HSPG2-212ENST00000493940 UBA7P41226 1012 aa13.85□□□□□ -0.19
HSPG2-212ENST00000493940 DSG1Q02413 1049 aa13.85□□□□□ -0.19
HSPG2-212ENST00000493940 HSP90AA2PQ14568 343 aaPredicted RBP13.85□□□□□ -0.19
HSPG2-212ENST00000493940 XKR4Q5GH76 650 aa13.85□□□□□ -0.19
HSPG2-212ENST00000493940 PRSS55Q6UWB4 352 aaPredicted RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms