RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 ADAM2Q99965 735 aa6.08□□□□□ -1.44
SMC4-223ENST00000493695 DUSP26Q9BV47 211 aa6.08□□□□□ -1.44
SMC4-223ENST00000493695 PRDM13Q9H4Q3 707 aa6.08□□□□□ -1.44
SMC4-223ENST00000493695 GPRC5DQ9NZD1 345 aa6.08□□□□□ -1.44
SMC4-223ENST00000493695 NOC2LQ9Y3T9 749 aaKnown RBP6.08□□□□□ -1.44
SMC4-223ENST00000493695 LPLP06858 475 aa6.07□□□□□ -1.44
SMC4-223ENST00000493695 PCBP1Q15365 356 aaKnown RBP eCLIP6.07□□□□□ -1.44
SMC4-223ENST00000493695 COLEC12Q5KU26 742 aa6.07□□□□□ -1.44
SMC4-223ENST00000493695 FAM102AQ5T9C2 384 aaPredicted RBP6.07□□□□□ -1.44
SMC4-223ENST00000493695 LRCH2Q5VUJ6 765 aa6.07□□□□□ -1.44
SMC4-223ENST00000493695 TSHZ3Q63HK5 1081 aa6.07□□□□□ -1.44
SMC4-223ENST00000493695 SMC1BQ8NDV3 1235 aa6.07□□□□□ -1.44
SMC4-223ENST00000493695 SNX33Q8WV41 574 aa6.07□□□□□ -1.44
SMC4-223ENST00000493695 RNF31Q96EP0 1072 aa6.07□□□□□ -1.44
SMC4-223ENST00000493695 CEP95Q96GE4 821 aa6.07□□□□□ -1.44
SMC4-223ENST00000493695 ORAI3Q9BRQ5 295 aa6.07□□□□□ -1.44
SMC4-223ENST00000493695 TMEM260Q9NX78 707 aa6.07□□□□□ -1.44
SMC4-223ENST00000493695 FDXRP22570 491 aa6.06□□□□□ -1.44
SMC4-223ENST00000493695 MANFP55145 182 aaKnown RBP6.06□□□□□ -1.44
SMC4-223ENST00000493695 LGALS4P56470 323 aa6.06□□□□□ -1.44
SMC4-223ENST00000493695 TRIM25Q14258 630 aaKnown RBP6.06□□□□□ -1.44
SMC4-223ENST00000493695 TERF2Q15554 542 aa6.06□□□□□ -1.44
SMC4-223ENST00000493695 PRAMEF14Q5SWL7 426 aa6.06□□□□□ -1.44
SMC4-223ENST00000493695 GPR158Q5T848 1215 aa6.06□□□□□ -1.44
SMC4-223ENST00000493695 FBXO18Q8NFZ0 1043 aa6.06□□□□□ -1.44
SMC4-223ENST00000493695 OR2W6PQ8NHA6 318 aa6.06□□□□□ -1.44
SMC4-223ENST00000493695 ZNF384Q8TF68 577 aa6.06□□□□□ -1.44
SMC4-223ENST00000493695 RSAD2Q8WXG1 361 aa6.06□□□□□ -1.44
SMC4-223ENST00000493695 ALOXE3Q9BYJ1 711 aa6.06□□□□□ -1.44
SMC4-223ENST00000493695 REXO4Q9GZR2 422 aaKnown RBP6.06□□□□□ -1.44
SMC4-223ENST00000493695 DKK2Q9UBU2 259 aa6.06□□□□□ -1.44
SMC4-223ENST00000493695 EDARQ9UNE0 448 aa6.06□□□□□ -1.44
SMC4-223ENST00000493695 ARHGEF17Q96PE2 2063 aaPredicted RBP6.06□□□□□ -1.44
SMC4-223ENST00000493695 DRGXA6NNA5 263 aa6.05□□□□□ -1.44
SMC4-223ENST00000493695 CTSSP25774 331 aa6.05□□□□□ -1.44
SMC4-223ENST00000493695 PHC1P78364 1004 aa6.05□□□□□ -1.44
SMC4-223ENST00000493695 MEF2AQ02078 507 aaPredicted RBP6.05□□□□□ -1.44
SMC4-223ENST00000493695 C19orf54Q5BKX5 351 aa6.05□□□□□ -1.44
SMC4-223ENST00000493695 CT83Q5H943 113 aa6.05□□□□□ -1.44
SMC4-223ENST00000493695 RRP12Q5JTH9 1297 aaKnown RBP6.05□□□□□ -1.44
SMC4-223ENST00000493695 MFSD14BQ5SR56 506 aa6.05□□□□□ -1.44
SMC4-223ENST00000493695 BROXQ5VW32 411 aa6.05□□□□□ -1.44
SMC4-223ENST00000493695 MED25Q71SY5 747 aa6.05□□□□□ -1.44
SMC4-223ENST00000493695 MAPKAPK5Q8IW41 473 aa6.05□□□□□ -1.44
SMC4-223ENST00000493695 DHX37Q8IY37 1157 aaKnown RBP6.05□□□□□ -1.44
SMC4-223ENST00000493695 SYNPOQ8N3V7 929 aa6.05□□□□□ -1.44
SMC4-223ENST00000493695 OR56A1Q8NGH5 318 aa6.05□□□□□ -1.44
SMC4-223ENST00000493695 SLC35B2Q8TB61 432 aa6.05□□□□□ -1.44
SMC4-223ENST00000493695 ZNF480Q8WV37 535 aa6.05□□□□□ -1.44
SMC4-223ENST00000493695 SLC9A6Q92581 669 aa6.05□□□□□ -1.44
SMC4-223ENST00000493695 Q96MF0 132 aa6.05□□□□□ -1.44
SMC4-223ENST00000493695 CASS4Q9NQ75 786 aa6.05□□□□□ -1.44
SMC4-223ENST00000493695 LRIT1Q9P2V4 623 aa6.05□□□□□ -1.44
SMC4-223ENST00000493695 ADCY6O43306 1168 aa6.04□□□□□ -1.44
SMC4-223ENST00000493695 TMEM127O75204 238 aa6.04□□□□□ -1.44
SMC4-223ENST00000493695 FKBP9O95302 570 aa6.04□□□□□ -1.44
SMC4-223ENST00000493695 GASTP01350 101 aa6.04□□□□□ -1.44
SMC4-223ENST00000493695 ERBB2P04626 1255 aa6.04□□□□□ -1.44
SMC4-223ENST00000493695 EGR2P11161 476 aaPredicted RBP6.04□□□□□ -1.44
SMC4-223ENST00000493695 ADSLP30566 484 aaPredicted RBP6.04□□□□□ -1.44
SMC4-223ENST00000493695 CLRN1P58418 232 aa6.04□□□□□ -1.44
SMC4-223ENST00000493695 FKBP9P1Q75LS8 142 aa6.04□□□□□ -1.44
SMC4-223ENST00000493695 HOMER1Q86YM7 354 aa6.04□□□□□ -1.44
SMC4-223ENST00000493695 AHI1Q8N157 1196 aa6.04□□□□□ -1.44
SMC4-223ENST00000493695 REPS2Q8NFH8 660 aa6.04□□□□□ -1.44
SMC4-223ENST00000493695 UHRF1Q96T88 793 aaPredicted RBP6.04□□□□□ -1.44
SMC4-223ENST00000493695 NEU1Q99519 415 aa6.04□□□□□ -1.44
SMC4-223ENST00000493695 ZSWIM1Q9BR11 485 aa6.04□□□□□ -1.44
SMC4-223ENST00000493695 LRFN3Q9BTN0 628 aa6.04□□□□□ -1.44
SMC4-223ENST00000493695 KCTD10Q9H3F6 313 aa6.04□□□□□ -1.44
SMC4-223ENST00000493695 CDY2AQ9Y6F7 541 aa6.04□□□□□ -1.44
SMC4-223ENST00000493695 AKR1B10O60218 316 aa6.03□□□□□ -1.44
SMC4-223ENST00000493695 CFIP05156 583 aa6.03□□□□□ -1.44
SMC4-223ENST00000493695 MPLP40238 635 aa6.03□□□□□ -1.44
SMC4-223ENST00000493695 LSSP48449 732 aa6.03□□□□□ -1.44
SMC4-223ENST00000493695 PITRM1Q5JRX3 1037 aa6.03□□□□□ -1.44
SMC4-223ENST00000493695 ARMC6Q6NXE6 501 aa6.03□□□□□ -1.44
SMC4-223ENST00000493695 PPM1KQ8N3J5 372 aa6.03□□□□□ -1.44
SMC4-223ENST00000493695 WNT8AQ9H1J5 351 aa6.03□□□□□ -1.44
SMC4-223ENST00000493695 PRDM12Q9H4Q4 367 aa6.03□□□□□ -1.44
SMC4-223ENST00000493695 TBCCD1Q9NVR7 557 aa6.03□□□□□ -1.44
SMC4-223ENST00000493695 TMPRSS11EQ9UL52 423 aa6.03□□□□□ -1.44
SMC4-223ENST00000493695 RPTORQ8N122 1335 aa6.02□□□□□ -1.45
SMC4-223ENST00000493695 MYADML2A6NDP7 307 aa6.02□□□□□ -1.45
SMC4-223ENST00000493695 IGLV2-14P01704 120 aa6.02□□□□□ -1.45
SMC4-223ENST00000493695 RAP2AP10114 183 aa6.02□□□□□ -1.45
SMC4-223ENST00000493695 FLT3LGP49771 235 aa6.02□□□□□ -1.45
SMC4-223ENST00000493695 PER3P56645 1201 aa6.02□□□□□ -1.45
SMC4-223ENST00000493695 CCT2P78371 535 aaKnown RBP6.02□□□□□ -1.45
SMC4-223ENST00000493695 CDK17Q00537 523 aa6.02□□□□□ -1.45
SMC4-223ENST00000493695 SEPT7Q16181 437 aaKnown RBP6.02□□□□□ -1.45
SMC4-223ENST00000493695 UGT8Q16880 541 aa6.02□□□□□ -1.45
SMC4-223ENST00000493695 AGAP9Q5VTM2 703 aa6.02□□□□□ -1.45
SMC4-223ENST00000493695 GPR149Q86SP6 731 aa6.02□□□□□ -1.45
SMC4-223ENST00000493695 NIM1KQ8IY84 436 aa6.02□□□□□ -1.45
SMC4-223ENST00000493695 SALL3Q9BXA9 1300 aa6.01□□□□□ -1.45
SMC4-223ENST00000493695 KAT6AQ92794 2004 aa6.01□□□□□ -1.45
SMC4-223ENST00000493695 PHF2O75151 1096 aa6.01□□□□□ -1.45
SMC4-223ENST00000493695 SNRPA1P09661 255 aaKnown RBP6.01□□□□□ -1.45
SMC4-223ENST00000493695 POU3F2P20265 443 aaPredicted RBP6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms