RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 CDR2Q01850 454 aa11.63□□□□□ -0.55
PHACTR4-204ENST00000493669 GRM1Q13255 1194 aa11.63□□□□□ -0.55
PHACTR4-204ENST00000493669 SLC20A1Q8WUM9 679 aa11.63□□□□□ -0.55
PHACTR4-204ENST00000493669 KAT5Q92993 513 aa11.63□□□□□ -0.55
PHACTR4-204ENST00000493669 SLC10A4Q96EP9 437 aa11.63□□□□□ -0.55
PHACTR4-204ENST00000493669 ADGRA2Q96PE1 1338 aa11.63□□□□□ -0.55
PHACTR4-204ENST00000493669 POP1Q99575 1024 aaKnown RBP11.63□□□□□ -0.55
PHACTR4-204ENST00000493669 TOPORSQ9NS56 1045 aaPredicted RBP11.63□□□□□ -0.55
PHACTR4-204ENST00000493669 PGRMC1O00264 195 aaKnown RBP11.63□□□□□ -0.55
PHACTR4-204ENST00000493669 GPC5P78333 572 aa11.63□□□□□ -0.55
PHACTR4-204ENST00000493669 TTLL4Q14679 1199 aa11.63□□□□□ -0.55
PHACTR4-204ENST00000493669 WDR44Q5JSH3 913 aa11.63□□□□□ -0.55
PHACTR4-204ENST00000493669 NOP9Q86U38 636 aaKnown RBP11.63□□□□□ -0.55
PHACTR4-204ENST00000493669 ZNF677Q86XU0 584 aa11.63□□□□□ -0.55
PHACTR4-204ENST00000493669 DHX37Q8IY37 1157 aaKnown RBP11.63□□□□□ -0.55
PHACTR4-204ENST00000493669 SCFD2Q8WU76 684 aa11.63□□□□□ -0.55
PHACTR4-204ENST00000493669 GLG1Q92896 1179 aa11.63□□□□□ -0.55
PHACTR4-204ENST00000493669 MS4A14Q96JA4 679 aa11.63□□□□□ -0.55
PHACTR4-204ENST00000493669 MSTO1Q9BUK6 570 aa11.63□□□□□ -0.55
PHACTR4-204ENST00000493669 THAP2Q9H0W7 228 aa11.63□□□□□ -0.55
PHACTR4-204ENST00000493669 SMARCAD1Q9H4L7 1026 aa11.63□□□□□ -0.55
PHACTR4-204ENST00000493669 PACSIN2Q9UNF0 486 aaPredicted RBP11.63□□□□□ -0.55
PHACTR4-204ENST00000493669 CCDC188H7C350 402 aa11.62□□□□□ -0.55
PHACTR4-204ENST00000493669 BUB1BO60566 1050 aaPredicted RBP11.62□□□□□ -0.55
PHACTR4-204ENST00000493669 CLSTN1O94985 981 aa11.62□□□□□ -0.55
PHACTR4-204ENST00000493669 SGPL1O95470 568 aa11.62□□□□□ -0.55
PHACTR4-204ENST00000493669 CYP11B1P15538 503 aa11.62□□□□□ -0.55
PHACTR4-204ENST00000493669 CHRNB2P17787 502 aa11.62□□□□□ -0.55
PHACTR4-204ENST00000493669 GJA5P36382 358 aa11.62□□□□□ -0.55
PHACTR4-204ENST00000493669 USP8P40818 1118 aa11.62□□□□□ -0.55
PHACTR4-204ENST00000493669 BPIFB4P59827 614 aa11.62□□□□□ -0.55
PHACTR4-204ENST00000493669 EEPD1Q7L9B9 569 aa11.62□□□□□ -0.55
PHACTR4-204ENST00000493669 ZBTB8OSQ8IWT0 167 aa11.62□□□□□ -0.55
PHACTR4-204ENST00000493669 CGRRF1Q99675 332 aa11.62□□□□□ -0.55
PHACTR4-204ENST00000493669 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.62□□□□□ -0.555e-6■□□□□ 11
PHACTR4-204ENST00000493669 MRPL4Q9BYD3 311 aaKnown RBP11.62□□□□□ -0.55
PHACTR4-204ENST00000493669 TAS2R14Q9NYV8 317 aa11.62□□□□□ -0.55
PHACTR4-204ENST00000493669 RBAKQ9NYW8 714 aaPredicted RBP11.62□□□□□ -0.55
PHACTR4-204ENST00000493669 EHD2Q9NZN4 543 aa11.62□□□□□ -0.55
PHACTR4-204ENST00000493669 TMCO5BA8MYB1 307 aa11.62□□□□□ -0.55
PHACTR4-204ENST00000493669 CYP26A1O43174 497 aa11.62□□□□□ -0.55
PHACTR4-204ENST00000493669 FTLP02792 175 aaPredicted RBP11.62□□□□□ -0.55
PHACTR4-204ENST00000493669 C4BPAP04003 597 aaKnown RBP11.62□□□□□ -0.55
PHACTR4-204ENST00000493669 CETPP11597 493 aa11.62□□□□□ -0.55
PHACTR4-204ENST00000493669 ABCB4P21439 1286 aa11.62□□□□□ -0.55
PHACTR4-204ENST00000493669 NLRP11P59045 1033 aaKnown RBP11.62□□□□□ -0.55
PHACTR4-204ENST00000493669 CRELD2Q6UXH1 353 aaPredicted RBP11.62□□□□□ -0.55
PHACTR4-204ENST00000493669 PALB2Q86YC2 1186 aa11.62□□□□□ -0.55
PHACTR4-204ENST00000493669 ABRAQ8N0Z2 381 aa11.62□□□□□ -0.55
PHACTR4-204ENST00000493669 METTL13Q8N6R0 699 aa11.62□□□□□ -0.55
PHACTR4-204ENST00000493669 AENQ8WTP8 325 aaKnown RBP11.62□□□□□ -0.55
PHACTR4-204ENST00000493669 SPATA33Q96N06 139 aa11.62□□□□□ -0.55
PHACTR4-204ENST00000493669 TARS2Q9BW92 718 aaKnown RBP11.62□□□□□ -0.55
PHACTR4-204ENST00000493669 CCDC113Q9H0I3 377 aa11.62□□□□□ -0.55
PHACTR4-204ENST00000493669 OSGEPQ9NPF4 335 aa11.62□□□□□ -0.55
PHACTR4-204ENST00000493669 SMARCAL1Q9NZC9 954 aa11.62□□□□□ -0.55
PHACTR4-204ENST00000493669 MIF4GDA9UHW6 222 aaKnown RBP11.61□□□□□ -0.55
PHACTR4-204ENST00000493669 HBP1O60381 514 aa11.61□□□□□ -0.55
PHACTR4-204ENST00000493669 MATR3P43243 847 aaKnown RBP eCLIP11.61□□□□□ -0.553e-7■□□□□ 8.1
PHACTR4-204ENST00000493669 FKBP1BP68106 108 aa11.61□□□□□ -0.55
PHACTR4-204ENST00000493669 FMO1Q01740 532 aa11.61□□□□□ -0.55
PHACTR4-204ENST00000493669 HSDL1Q3SXM5 330 aa11.61□□□□□ -0.55
PHACTR4-204ENST00000493669 EAPPQ56P03 285 aaPredicted RBP11.61□□□□□ -0.55
PHACTR4-204ENST00000493669 EMBQ6PCB8 327 aa11.61□□□□□ -0.55
PHACTR4-204ENST00000493669 DNAAF5Q86Y56 855 aa11.61□□□□□ -0.55
PHACTR4-204ENST00000493669 IFT20Q8IY31 132 aa11.61□□□□□ -0.55
PHACTR4-204ENST00000493669 EIF1ADQ8N9N8 165 aaKnown RBP11.61□□□□□ -0.55
PHACTR4-204ENST00000493669 GPRC5AQ8NFJ5 357 aa11.61□□□□□ -0.55
PHACTR4-204ENST00000493669 PRPF31Q8WWY3 499 aaKnown RBP11.61□□□□□ -0.55
PHACTR4-204ENST00000493669 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.61□□□□□ -0.55
PHACTR4-204ENST00000493669 ZNF516Q92618 1163 aa11.61□□□□□ -0.55
PHACTR4-204ENST00000493669 ARHGEF26Q96DR7 871 aa11.61□□□□□ -0.55
PHACTR4-204ENST00000493669 CARD9Q9H257 536 aa11.61□□□□□ -0.55
PHACTR4-204ENST00000493669 R3HDMLQ9H3Y0 253 aa11.61□□□□□ -0.55
PHACTR4-204ENST00000493669 CEP104O60308 925 aa11.61□□□□□ -0.55
PHACTR4-204ENST00000493669 TOM1L1O75674 476 aa11.61□□□□□ -0.55
PHACTR4-204ENST00000493669 HLA-DRAP01903 254 aa11.61□□□□□ -0.55
PHACTR4-204ENST00000493669 TNNI1P19237 187 aa11.61□□□□□ -0.55
PHACTR4-204ENST00000493669 EPHB4P54760 987 aa11.61□□□□□ -0.55
PHACTR4-204ENST00000493669 NNTQ13423 1086 aa11.61□□□□□ -0.55
PHACTR4-204ENST00000493669 TFDP1Q14186 410 aa11.61□□□□□ -0.55
PHACTR4-204ENST00000493669 PLCB4Q15147 1175 aa11.61□□□□□ -0.55
PHACTR4-204ENST00000493669 SURF1Q15526 300 aa11.61□□□□□ -0.55
PHACTR4-204ENST00000493669 SLC47A2Q86VL8 602 aa11.61□□□□□ -0.55
PHACTR4-204ENST00000493669 FBXO16Q8IX29 292 aaPredicted RBP11.61□□□□□ -0.55
PHACTR4-204ENST00000493669 NAP1L3Q99457 506 aaPredicted RBP11.61□□□□□ -0.55
PHACTR4-204ENST00000493669 VTA1Q9NP79 307 aa11.61□□□□□ -0.55
PHACTR4-204ENST00000493669 MED4Q9NPJ6 270 aa11.61□□□□□ -0.55
PHACTR4-204ENST00000493669 DMGDHQ9UI17 866 aaKnown RBP11.61□□□□□ -0.55
PHACTR4-204ENST00000493669 GTF3C4Q9UKN8 822 aa11.61□□□□□ -0.55
PHACTR4-204ENST00000493669 A0A0U1RQG5 324 aaPredicted RBP11.61□□□□□ -0.55
PHACTR4-204ENST00000493669 ZBTB42B2RXF5 422 aa11.61□□□□□ -0.55
PHACTR4-204ENST00000493669 TXNP10599 105 aaKnown RBP11.61□□□□□ -0.55
PHACTR4-204ENST00000493669 TBXAS1P24557 533 aaPredicted RBP11.61□□□□□ -0.55
PHACTR4-204ENST00000493669 PIK3CAP42336 1068 aa11.61□□□□□ -0.55
PHACTR4-204ENST00000493669 GCLCP48506 637 aaPredicted RBP11.61□□□□□ -0.55
PHACTR4-204ENST00000493669 AARSP49588 968 aaKnown RBP eCLIP11.61□□□□□ -0.55
PHACTR4-204ENST00000493669 DNA2P51530 1060 aa11.61□□□□□ -0.55
PHACTR4-204ENST00000493669 GTF2A2P52657 109 aa11.61□□□□□ -0.55
PHACTR4-204ENST00000493669 PPP2R5EQ16537 467 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms