RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 RUFY4Q6ZNE9 571 aa7.5□□□□□ -1.21
VPS52-219ENST00000493379 FERMT3Q86UX7 667 aa7.5□□□□□ -1.21
VPS52-219ENST00000493379 RPUSD2Q8IZ73 545 aaKnown RBP7.5□□□□□ -1.21
VPS52-219ENST00000493379 CRIPAKQ8N1N5 446 aa7.5□□□□□ -1.21
VPS52-219ENST00000493379 KCNN1Q92952 543 aa7.5□□□□□ -1.21
VPS52-219ENST00000493379 NACC1Q96RE7 527 aa7.5□□□□□ -1.21
VPS52-219ENST00000493379 USP28Q96RU2 1077 aa7.5□□□□□ -1.21
VPS52-219ENST00000493379 JPH2Q9BR39 696 aaPredicted RBP7.5□□□□□ -1.21
VPS52-219ENST00000493379 LXNQ9BS40 222 aa7.5□□□□□ -1.21
VPS52-219ENST00000493379 RAB34Q9BZG1 259 aa7.5□□□□□ -1.21
VPS52-219ENST00000493379 ADAMTS10Q9H324 1103 aa7.5□□□□□ -1.21
VPS52-219ENST00000493379 CYP26B1Q9NR63 512 aa7.5□□□□□ -1.21
VPS52-219ENST00000493379 TOR4AQ9NXH8 423 aa7.5□□□□□ -1.21
VPS52-219ENST00000493379 KIAA1522Q9P206 1035 aaPredicted RBP7.5□□□□□ -1.21
VPS52-219ENST00000493379 LRWD1Q9UFC0 647 aa7.5□□□□□ -1.21
VPS52-219ENST00000493379 FBXO2Q9UK22 296 aaPredicted RBP7.5□□□□□ -1.21
VPS52-219ENST00000493379 CLIC4Q9Y696 253 aa7.5□□□□□ -1.21
VPS52-219ENST00000493379 ZBTB39O15060 712 aa7.49□□□□□ -1.21
VPS52-219ENST00000493379 ASAP2O43150 1006 aa7.49□□□□□ -1.21
VPS52-219ENST00000493379 CHMP2AO43633 222 aa7.49□□□□□ -1.21
VPS52-219ENST00000493379 DGAT1O75907 488 aa7.49□□□□□ -1.21
VPS52-219ENST00000493379 TMOD1P28289 359 aa7.49□□□□□ -1.21
VPS52-219ENST00000493379 CTTNQ14247 550 aaKnown RBP7.49□□□□□ -1.21
VPS52-219ENST00000493379 COL19A1Q14993 1142 aa7.49□□□□□ -1.21
VPS52-219ENST00000493379 PLEKHG4Q58EX7 1191 aa7.49□□□□□ -1.21
VPS52-219ENST00000493379 AXDND1Q5T1B0 1012 aaPredicted RBP7.49□□□□□ -1.21
VPS52-219ENST00000493379 IER5Q5VY09 327 aa7.49□□□□□ -1.21
VPS52-219ENST00000493379 HAUS3Q68CZ6 603 aa7.49□□□□□ -1.21
VPS52-219ENST00000493379 NCAPH2Q6IBW4 605 aa7.49□□□□□ -1.21
VPS52-219ENST00000493379 EFCAB12Q6NXP0 572 aa7.49□□□□□ -1.21
VPS52-219ENST00000493379 FAM173BQ6P4H8 233 aa7.49□□□□□ -1.21
VPS52-219ENST00000493379 LRRC8DQ7L1W4 858 aa7.49□□□□□ -1.21
VPS52-219ENST00000493379 RSPH3Q86UC2 560 aa7.49□□□□□ -1.21
VPS52-219ENST00000493379 TPH2Q8IWU9 490 aa7.49□□□□□ -1.21
VPS52-219ENST00000493379 CYP4X1Q8N118 509 aa7.49□□□□□ -1.21
VPS52-219ENST00000493379 ERMNQ8TAM6 284 aa7.49□□□□□ -1.21
VPS52-219ENST00000493379 PPP1R13LQ8WUF5 828 aa7.49□□□□□ -1.21
VPS52-219ENST00000493379 TRAPPC12Q8WVT3 735 aa7.49□□□□□ -1.21
VPS52-219ENST00000493379 DNAJB3Q8WWF6 145 aa7.49□□□□□ -1.21
VPS52-219ENST00000493379 MRRFQ96E11 262 aaKnown RBP7.49□□□□□ -1.21
VPS52-219ENST00000493379 ZNF396Q96N95 335 aaPredicted RBP7.49□□□□□ -1.21
VPS52-219ENST00000493379 CELF4Q9BZC1 486 aaKnown RBP7.49□□□□□ -1.21
VPS52-219ENST00000493379 NT5C3AQ9H0P0 336 aa7.49□□□□□ -1.21
VPS52-219ENST00000493379 ZNF395Q9H8N7 513 aaPredicted RBP7.49□□□□□ -1.21
VPS52-219ENST00000493379 XPNPEP1Q9NQW7 623 aa7.49□□□□□ -1.21
VPS52-219ENST00000493379 PLA2G2EQ9NZK7 142 aa7.49□□□□□ -1.21
VPS52-219ENST00000493379 SLC4A7Q9Y6M7 1214 aa7.49□□□□□ -1.21
VPS52-219ENST00000493379 DOCK5Q9H7D0 1870 aa7.49□□□□□ -1.21
VPS52-219ENST00000493379 OTOGLQ3ZCN5 2332 aa7.49□□□□□ -1.21
VPS52-219ENST00000493379 ABHD14A-ACY1A0A1B0GW23 586 aa7.48□□□□□ -1.21
VPS52-219ENST00000493379 NDUFB5O43674 189 aa7.48□□□□□ -1.21
VPS52-219ENST00000493379 FZD6O60353 706 aa7.48□□□□□ -1.21
VPS52-219ENST00000493379 EFCAB14O75071 495 aa7.48□□□□□ -1.21
VPS52-219ENST00000493379 BAIAP3O94812 1187 aa7.48□□□□□ -1.21
VPS52-219ENST00000493379 EYA4O95677 639 aa7.48□□□□□ -1.21
VPS52-219ENST00000493379 HSP90AA1P07900 732 aaKnown RBP7.48□□□□□ -1.21
VPS52-219ENST00000493379 ATP2A2P16615 1042 aaKnown RBP7.48□□□□□ -1.21
VPS52-219ENST00000493379 CYP11B2P19099 503 aa7.48□□□□□ -1.21
VPS52-219ENST00000493379 ARL2P36404 184 aa7.48□□□□□ -1.21
VPS52-219ENST00000493379 THPOP40225 353 aa7.48□□□□□ -1.21
VPS52-219ENST00000493379 CRYBB1P53674 252 aaPredicted RBP7.48□□□□□ -1.21
VPS52-219ENST00000493379 CCL23P55773 120 aa7.48□□□□□ -1.21
VPS52-219ENST00000493379 NPEPPSP55786 919 aa7.48□□□□□ -1.21
VPS52-219ENST00000493379 NUCB2P80303 420 aa7.48□□□□□ -1.21
VPS52-219ENST00000493379 MRPS6P82932 125 aaKnown RBP7.48□□□□□ -1.21
VPS52-219ENST00000493379 ZXDAP98168 799 aa7.48□□□□□ -1.21
VPS52-219ENST00000493379 GRIN1Q05586 938 aa7.48□□□□□ -1.21
VPS52-219ENST00000493379 TBC1D8BQ0IIM8 1120 aa7.48□□□□□ -1.21
VPS52-219ENST00000493379 PCBP1Q15365 356 aaKnown RBP eCLIP7.48□□□□□ -1.21
VPS52-219ENST00000493379 TMEM119Q4V9L6 283 aa7.48□□□□□ -1.21
VPS52-219ENST00000493379 FBXO47Q5MNV8 452 aa7.48□□□□□ -1.21
VPS52-219ENST00000493379 KRT79Q5XKE5 535 aa7.48□□□□□ -1.21
VPS52-219ENST00000493379 ALKBH2Q6NS38 261 aa7.48□□□□□ -1.21
VPS52-219ENST00000493379 EP400NLQ6ZTU2 488 aa7.48□□□□□ -1.21
VPS52-219ENST00000493379 C1orf186Q6ZWK4 172 aa7.48□□□□□ -1.21
VPS52-219ENST00000493379 TMC7Q7Z402 723 aa7.48□□□□□ -1.21
VPS52-219ENST00000493379 CKAP2LQ8IYA6 745 aa7.48□□□□□ -1.21
VPS52-219ENST00000493379 ALDH16A1Q8IZ83 802 aa7.48□□□□□ -1.21
VPS52-219ENST00000493379 SYT2Q8N9I0 419 aaPredicted RBP7.48□□□□□ -1.21
VPS52-219ENST00000493379 NBEAQ8NFP9 2946 aa7.48□□□□□ -1.21
VPS52-219ENST00000493379 PHOSPHO2Q8TCD6 241 aa7.48□□□□□ -1.21
VPS52-219ENST00000493379 APBB2Q92870 758 aa7.48□□□□□ -1.21
VPS52-219ENST00000493379 SCLYQ96I15 445 aa7.48□□□□□ -1.21
VPS52-219ENST00000493379 CEP170P1Q96L14 293 aa7.48□□□□□ -1.21
VPS52-219ENST00000493379 PNMA5Q96PV4 448 aa7.48□□□□□ -1.21
VPS52-219ENST00000493379 NTPCRQ9BSD7 190 aaKnown RBP7.48□□□□□ -1.21
VPS52-219ENST00000493379 NFKBIZQ9BYH8 718 aa7.48□□□□□ -1.21
VPS52-219ENST00000493379 OSBPL7Q9BZF2 842 aa7.48□□□□□ -1.21
VPS52-219ENST00000493379 PRKAG3Q9UGI9 489 aa7.48□□□□□ -1.21
VPS52-219ENST00000493379 CFAP45Q9UL16 551 aa7.48□□□□□ -1.21
VPS52-219ENST00000493379 ZNF232Q9UNY5 417 aa7.48□□□□□ -1.21
VPS52-219ENST00000493379 MYO7AQ13402 2215 aa7.47□□□□□ -1.21
VPS52-219ENST00000493379 FAM237AA0A1B0GTK4 181 aa7.47□□□□□ -1.21
VPS52-219ENST00000493379 TMEM150BA6NC51 233 aa7.47□□□□□ -1.21
VPS52-219ENST00000493379 VWA3AA6NCI4 1184 aa7.47□□□□□ -1.21
VPS52-219ENST00000493379 SPTLC2O15270 562 aa7.47□□□□□ -1.21
VPS52-219ENST00000493379 EIF4BP23588 611 aaKnown RBP7.47□□□□□ -1.21
VPS52-219ENST00000493379 BRD2P25440 801 aaKnown RBP7.47□□□□□ -1.21
VPS52-219ENST00000493379 CDC25AP30304 524 aa7.47□□□□□ -1.21
VPS52-219ENST00000493379 CCT6AP40227 531 aaKnown RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms