RNA–Protein interactions for RNA: ENST00000492973.1

TPR-208, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 2

Gene TPR, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-208ENST00000492973 IFIT3O14879 490 aaKnown RBP7.95□□□□□ -1.14
TPR-208ENST00000492973 TOP1P11387 765 aaKnown RBP7.95□□□□□ -1.14
TPR-208ENST00000492973 HOXA7P31268 230 aaPredicted RBP7.95□□□□□ -1.14
TPR-208ENST00000492973 MCM5P33992 734 aa7.95□□□□□ -1.14
TPR-208ENST00000492973 MCM2P49736 904 aa7.95□□□□□ -1.14
TPR-208ENST00000492973 AK2P54819 239 aa7.95□□□□□ -1.14
TPR-208ENST00000492973 KLRC3Q07444 240 aa7.95□□□□□ -1.14
TPR-208ENST00000492973 CYP4F3Q08477 520 aa7.95□□□□□ -1.14
TPR-208ENST00000492973 SERINC3Q13530 473 aa7.95□□□□□ -1.14
TPR-208ENST00000492973 TOB2Q14106 344 aaPredicted RBP7.95□□□□□ -1.14
TPR-208ENST00000492973 CCDC178Q5BJE1 867 aa7.95□□□□□ -1.14
TPR-208ENST00000492973 SLFN13Q68D06 897 aa7.95□□□□□ -1.14
TPR-208ENST00000492973 CATSPERGQ6ZRH7 1159 aa7.95□□□□□ -1.14
TPR-208ENST00000492973 Q6ZUG5 572 aa7.95□□□□□ -1.14
TPR-208ENST00000492973 IQCA1Q86XH1 822 aa7.95□□□□□ -1.14
TPR-208ENST00000492973 FBXL16Q8N461 479 aa7.95□□□□□ -1.14
TPR-208ENST00000492973 GMCL1P1Q8NEA9 526 aa7.95□□□□□ -1.14
TPR-208ENST00000492973 CHMP4CQ96CF2 233 aa7.95□□□□□ -1.14
TPR-208ENST00000492973 TCEANC2Q96MN5 208 aa7.95□□□□□ -1.14
TPR-208ENST00000492973 NUP88Q99567 741 aaPredicted RBP7.95□□□□□ -1.14
TPR-208ENST00000492973 UBAC1Q9BSL1 405 aa7.95□□□□□ -1.14
TPR-208ENST00000492973 MTA3Q9BTC8 594 aa7.95□□□□□ -1.14
TPR-208ENST00000492973 KRTAP4-8Q9BYQ9 185 aa7.95□□□□□ -1.14
TPR-208ENST00000492973 LRRC2Q9BYS8 371 aa7.95□□□□□ -1.14
TPR-208ENST00000492973 AGXT2Q9BYV1 514 aa7.95□□□□□ -1.14
TPR-208ENST00000492973 NKX2-4Q9H2Z4 354 aa7.95□□□□□ -1.14
TPR-208ENST00000492973 ZCCHC17Q9NP64 241 aaKnown RBP7.95□□□□□ -1.14
TPR-208ENST00000492973 CRTAC1Q9NQ79 661 aa7.95□□□□□ -1.14
TPR-208ENST00000492973 RNF186Q9NXI6 227 aa7.95□□□□□ -1.14
TPR-208ENST00000492973 SLC45A1Q9Y2W3 748 aa7.95□□□□□ -1.14
TPR-208ENST00000492973 DOCK1Q14185 1865 aa7.95□□□□□ -1.14
TPR-208ENST00000492973 THSD7BQ9C0I4 1608 aa7.95□□□□□ -1.14
TPR-208ENST00000492973 GREB1LQ9C091 1923 aaPredicted RBP7.94□□□□□ -1.14
TPR-208ENST00000492973 WDR46O15213 610 aaKnown RBP7.94□□□□□ -1.14
TPR-208ENST00000492973 CA12O43570 354 aa7.94□□□□□ -1.14
TPR-208ENST00000492973 CYP2C8P10632 490 aa7.94□□□□□ -1.14
TPR-208ENST00000492973 SEPHS1P49903 392 aa7.94□□□□□ -1.14
TPR-208ENST00000492973 GALK1P51570 392 aa7.94□□□□□ -1.14
TPR-208ENST00000492973 MAP2K1Q02750 393 aaPredicted RBP7.94□□□□□ -1.14
TPR-208ENST00000492973 CRHR2Q13324 411 aa7.94□□□□□ -1.14
TPR-208ENST00000492973 KIR3DS1Q14943 382 aa7.94□□□□□ -1.14
TPR-208ENST00000492973 FAM83BQ5T0W9 1011 aa7.94□□□□□ -1.14
TPR-208ENST00000492973 OTUD7BQ6GQQ9 843 aa7.94□□□□□ -1.14
TPR-208ENST00000492973 MPZL3Q6UWV2 235 aa7.94□□□□□ -1.14
TPR-208ENST00000492973 HSCBQ8IWL3 235 aa7.94□□□□□ -1.14
TPR-208ENST00000492973 ST13P5Q8NFI4 369 aaPredicted RBP7.94□□□□□ -1.14
TPR-208ENST00000492973 BTN2A2Q8WVV5 523 aa7.94□□□□□ -1.14
TPR-208ENST00000492973 LPAR1Q92633 364 aa7.94□□□□□ -1.14
TPR-208ENST00000492973 INTS4Q96HW7 963 aaKnown RBP7.94□□□□□ -1.14
TPR-208ENST00000492973 P2RX7Q99572 595 aaKnown RBP7.94□□□□□ -1.14
TPR-208ENST00000492973 SLC6A17Q9H1V8 727 aa7.94□□□□□ -1.14
TPR-208ENST00000492973 RPAP3Q9H6T3 665 aaPredicted RBP7.94□□□□□ -1.14
TPR-208ENST00000492973 LY9Q9HBG7 655 aa7.94□□□□□ -1.14
TPR-208ENST00000492973 CYP26B1Q9NR63 512 aa7.94□□□□□ -1.14
TPR-208ENST00000492973 ACSL6Q9UKU0 697 aa7.94□□□□□ -1.14
TPR-208ENST00000492973 LIMCH1Q9UPQ0 1083 aa7.94□□□□□ -1.14
TPR-208ENST00000492973 WDR19Q8NEZ3 1342 aa7.94□□□□□ -1.14
TPR-208ENST00000492973 ADGRA2Q96PE1 1338 aa7.94□□□□□ -1.14
TPR-208ENST00000492973 LRRC10BA6NIK2 292 aa7.93□□□□□ -1.14
TPR-208ENST00000492973 PEX10O60683 326 aa7.93□□□□□ -1.14
TPR-208ENST00000492973 TBC1D8O95759 1140 aa7.93□□□□□ -1.14
TPR-208ENST00000492973 SNHG28P0DPA3 235 aa7.93□□□□□ -1.14
TPR-208ENST00000492973 PDHBP11177 359 aa7.93□□□□□ -1.14
TPR-208ENST00000492973 SCRN1Q12765 414 aa7.93□□□□□ -1.14
TPR-208ENST00000492973 CUL4AQ13619 759 aa7.93□□□□□ -1.14
TPR-208ENST00000492973 WTAPQ15007 396 aa7.93□□□□□ -1.14
TPR-208ENST00000492973 ANKRD1Q15327 319 aa7.93□□□□□ -1.14
TPR-208ENST00000492973 IFIT1BQ5T764 474 aaKnown RBP7.93□□□□□ -1.14
TPR-208ENST00000492973 OGFOD2Q6N063 350 aa7.93□□□□□ -1.14
TPR-208ENST00000492973 PRR23BQ6ZRT6 265 aa7.93□□□□□ -1.14
TPR-208ENST00000492973 IRF2BP1Q8IU81 584 aa7.93□□□□□ -1.14
TPR-208ENST00000492973 DCAF4Q8WV16 495 aa7.93□□□□□ -1.14
TPR-208ENST00000492973 TMX3Q96JJ7 454 aa7.93□□□□□ -1.14
TPR-208ENST00000492973 ZSCAN31Q96LW9 406 aaPredicted RBP7.93□□□□□ -1.14
TPR-208ENST00000492973 PARK7Q99497 189 aaKnown RBP7.93□□□□□ -1.14
TPR-208ENST00000492973 KAT14Q9H8E8 782 aa7.93□□□□□ -1.14
TPR-208ENST00000492973 FBXO28Q9NVF7 368 aa7.93□□□□□ -1.14
TPR-208ENST00000492973 SAGE1Q9NXZ1 904 aa7.93□□□□□ -1.14
TPR-208ENST00000492973 SIRPGQ9P1W8 387 aa7.93□□□□□ -1.14
TPR-208ENST00000492973 IMPACTQ9P2X3 320 aa7.93□□□□□ -1.14
TPR-208ENST00000492973 TPCN1Q9ULQ1 816 aa7.93□□□□□ -1.14
TPR-208ENST00000492973 LAMA4Q16363 1823 aa7.93□□□□□ -1.14
TPR-208ENST00000492973 PHIPQ8WWQ0 1821 aa7.93□□□□□ -1.14
TPR-208ENST00000492973 A0A1W2PQU0 124 aa7.92□□□□□ -1.14
TPR-208ENST00000492973 FOXN1O15353 648 aa7.92□□□□□ -1.14
TPR-208ENST00000492973 TLR2O60603 784 aa7.92□□□□□ -1.14
TPR-208ENST00000492973 CNMDO75829 334 aa7.92□□□□□ -1.14
TPR-208ENST00000492973 LARGE1O95461 756 aa7.92□□□□□ -1.14
TPR-208ENST00000492973 SCG5P05408 212 aa7.92□□□□□ -1.14
TPR-208ENST00000492973 HSPA1AP0DMV8 641 aaKnown RBP7.92□□□□□ -1.14
TPR-208ENST00000492973 HSPA1BP0DMV9 641 aaKnown RBP7.92□□□□□ -1.14
TPR-208ENST00000492973 PNLIPP16233 465 aa7.92□□□□□ -1.14
TPR-208ENST00000492973 LIFRP42702 1097 aa7.92□□□□□ -1.14
TPR-208ENST00000492973 SLC1A4P43007 532 aa7.92□□□□□ -1.14
TPR-208ENST00000492973 EVCP57679 992 aa7.92□□□□□ -1.14
TPR-208ENST00000492973 HERVK_113P62684 666 aa7.92□□□□□ -1.14
TPR-208ENST00000492973 IRX3P78415 501 aaPredicted RBP7.92□□□□□ -1.14
TPR-208ENST00000492973 ZNF543Q08ER8 600 aa7.92□□□□□ -1.14
TPR-208ENST00000492973 TROAPQ12815 778 aa7.92□□□□□ -1.14
TPR-208ENST00000492973 PABPC4Q13310 644 aaKnown RBP eCLIP7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms