RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.67□□□□□ -0.54
CDC42SE1-206ENST00000492796 NT5C1B-RDH14C9J2C7 533 aa11.67□□□□□ -0.54
CDC42SE1-206ENST00000492796 NRP1O14786 923 aa11.67□□□□□ -0.54
CDC42SE1-206ENST00000492796 HNRNPDLO14979 420 aaKnown RBP11.67□□□□□ -0.54
CDC42SE1-206ENST00000492796 B4GALT3O60512 393 aa11.67□□□□□ -0.54
CDC42SE1-206ENST00000492796 CSPG5O95196 566 aa11.67□□□□□ -0.54
CDC42SE1-206ENST00000492796 THP07101 528 aa11.67□□□□□ -0.54
CDC42SE1-206ENST00000492796 YARSP54577 528 aaKnown RBP11.67□□□□□ -0.54
CDC42SE1-206ENST00000492796 ERVFC1P60507 584 aa11.67□□□□□ -0.54
CDC42SE1-206ENST00000492796 MRPS5P82675 430 aaKnown RBP11.67□□□□□ -0.54
CDC42SE1-206ENST00000492796 MCL1Q07820 350 aa11.67□□□□□ -0.54
CDC42SE1-206ENST00000492796 ALCAMQ13740 583 aa11.67□□□□□ -0.54
CDC42SE1-206ENST00000492796 SMC1AQ14683 1233 aaKnown RBP11.67□□□□□ -0.54
CDC42SE1-206ENST00000492796 ADALQ6DHV7 355 aa11.67□□□□□ -0.54
CDC42SE1-206ENST00000492796 DDX53Q86TM3 631 aaKnown RBP11.67□□□□□ -0.54
CDC42SE1-206ENST00000492796 TMEM173Q86WV6 379 aaPredicted RBP11.67□□□□□ -0.54
CDC42SE1-206ENST00000492796 SFR1Q86XK3 245 aa11.67□□□□□ -0.54
CDC42SE1-206ENST00000492796 MAP4K3Q8IVH8 894 aa11.67□□□□□ -0.54
CDC42SE1-206ENST00000492796 MICAL1Q8TDZ2 1067 aa11.67□□□□□ -0.54
CDC42SE1-206ENST00000492796 DHX58Q96C10 678 aa11.67□□□□□ -0.54
CDC42SE1-206ENST00000492796 PABPC5Q96DU9 382 aaKnown RBP11.67□□□□□ -0.54
CDC42SE1-206ENST00000492796 BICD1Q96G01 975 aa11.67□□□□□ -0.54
CDC42SE1-206ENST00000492796 CDCA3Q99618 268 aaPredicted RBP11.67□□□□□ -0.54
CDC42SE1-206ENST00000492796 UBE2ZQ9H832 354 aaPredicted RBP11.67□□□□□ -0.54
CDC42SE1-206ENST00000492796 MIOSQ9NXC5 875 aa11.67□□□□□ -0.54
CDC42SE1-206ENST00000492796 KLK14Q9P0G3 267 aa11.67□□□□□ -0.54
CDC42SE1-206ENST00000492796 ANKFY1Q9P2R3 1169 aa11.67□□□□□ -0.54
CDC42SE1-206ENST00000492796 FAN1Q9Y2M0 1017 aa11.67□□□□□ -0.54
CDC42SE1-206ENST00000492796 GDAQ9Y2T3 454 aa11.67□□□□□ -0.54
CDC42SE1-206ENST00000492796 TCHHQ07283 1943 aa11.66□□□□□ -0.54
CDC42SE1-206ENST00000492796 PDCD11Q14690 1871 aaKnown RBP11.66□□□□□ -0.54
CDC42SE1-206ENST00000492796 EYSQ5T1H1 3165 aa11.66□□□□□ -0.54
CDC42SE1-206ENST00000492796 CITO14578 2027 aa11.66□□□□□ -0.54
CDC42SE1-206ENST00000492796 PTGESO14684 152 aa11.66□□□□□ -0.54
CDC42SE1-206ENST00000492796 POLR2DO15514 142 aaKnown RBP11.66□□□□□ -0.54
CDC42SE1-206ENST00000492796 CLDN3O15551 220 aa11.66□□□□□ -0.54
CDC42SE1-206ENST00000492796 IDEP14735 1019 aa11.66□□□□□ -0.54
CDC42SE1-206ENST00000492796 NMT1P30419 496 aaKnown RBP11.66□□□□□ -0.54
CDC42SE1-206ENST00000492796 OR1G1P47890 313 aa11.66□□□□□ -0.54
CDC42SE1-206ENST00000492796 LIG4P49917 911 aa11.66□□□□□ -0.54
CDC42SE1-206ENST00000492796 HYAL1Q12794 435 aa11.66□□□□□ -0.54
CDC42SE1-206ENST00000492796 TUSC3Q13454 348 aa11.66□□□□□ -0.54
CDC42SE1-206ENST00000492796 KYAT1Q16773 422 aa11.66□□□□□ -0.54
CDC42SE1-206ENST00000492796 TJAP1Q5JTD0 557 aa11.66□□□□□ -0.54
CDC42SE1-206ENST00000492796 PLPP4Q5VZY2 271 aa11.66□□□□□ -0.54
CDC42SE1-206ENST00000492796 CNNM4Q6P4Q7 775 aa11.66□□□□□ -0.54
CDC42SE1-206ENST00000492796 ZNF720Q7Z2F6 126 aa11.66□□□□□ -0.54
CDC42SE1-206ENST00000492796 TMC7Q7Z402 723 aa11.66□□□□□ -0.54
CDC42SE1-206ENST00000492796 ZBTB33Q86T24 672 aa11.66□□□□□ -0.54
CDC42SE1-206ENST00000492796 CCDC65Q8IXS2 484 aa11.66□□□□□ -0.54
CDC42SE1-206ENST00000492796 CEP120Q8N960 986 aa11.66□□□□□ -0.54
CDC42SE1-206ENST00000492796 BCL7CQ8WUZ0 217 aaPredicted RBP11.66□□□□□ -0.54
CDC42SE1-206ENST00000492796 ACAP3Q96P50 834 aa11.66□□□□□ -0.54
CDC42SE1-206ENST00000492796 COLEC11Q9BWP8 271 aa11.66□□□□□ -0.54
CDC42SE1-206ENST00000492796 TRIM9Q9C026 710 aa11.66□□□□□ -0.54
CDC42SE1-206ENST00000492796 ZBP1Q9H171 429 aa11.66□□□□□ -0.54
CDC42SE1-206ENST00000492796 MRPL44Q9H9J2 332 aaKnown RBP11.66□□□□□ -0.54
CDC42SE1-206ENST00000492796 PANK4Q9NVE7 773 aa11.66□□□□□ -0.54
CDC42SE1-206ENST00000492796 KCNH3Q9ULD8 1083 aa11.66□□□□□ -0.54
CDC42SE1-206ENST00000492796 PPP1R37O75864 691 aa11.65□□□□□ -0.54
CDC42SE1-206ENST00000492796 CTSAP10619 480 aa11.65□□□□□ -0.54
CDC42SE1-206ENST00000492796 HARSP12081 509 aaKnown RBP11.65□□□□□ -0.54
CDC42SE1-206ENST00000492796 CMA1P23946 247 aa11.65□□□□□ -0.54
CDC42SE1-206ENST00000492796 MATR3P43243 847 aaKnown RBP eCLIP11.65□□□□□ -0.543e-6■■□□□ 12.7
CDC42SE1-206ENST00000492796 NRIP1P48552 1158 aa11.65□□□□□ -0.54
CDC42SE1-206ENST00000492796 NAB2Q15742 525 aa11.65□□□□□ -0.54
CDC42SE1-206ENST00000492796 CTC1Q2NKJ3 1217 aa11.65□□□□□ -0.54
CDC42SE1-206ENST00000492796 XKR4Q5GH76 650 aa11.65□□□□□ -0.54
CDC42SE1-206ENST00000492796 HERC4Q5GLZ8 1057 aaPredicted RBP11.65□□□□□ -0.54
CDC42SE1-206ENST00000492796 ADGRD2Q7Z7M1 963 aa11.65□□□□□ -0.54
CDC42SE1-206ENST00000492796 VPS52Q8N1B4 723 aa11.65□□□□□ -0.54
CDC42SE1-206ENST00000492796 EFHBQ8N7U6 833 aa11.65□□□□□ -0.54
CDC42SE1-206ENST00000492796 ZBTB45Q96K62 511 aaPredicted RBP11.65□□□□□ -0.54
CDC42SE1-206ENST00000492796 SNX27Q96L92 541 aa11.65□□□□□ -0.54
CDC42SE1-206ENST00000492796 ASB2Q96Q27 587 aa11.65□□□□□ -0.54
CDC42SE1-206ENST00000492796 PPP1R10Q96QC0 940 aaKnown RBP11.65□□□□□ -0.54
CDC42SE1-206ENST00000492796 C7orf25Q9BPX7 421 aa11.65□□□□□ -0.54
CDC42SE1-206ENST00000492796 STRA6Q9BX79 667 aa11.65□□□□□ -0.54
CDC42SE1-206ENST00000492796 TLE6Q9H808 572 aa11.65□□□□□ -0.54
CDC42SE1-206ENST00000492796 SLC38A7Q9NVC3 462 aa11.65□□□□□ -0.54
CDC42SE1-206ENST00000492796 MARCH5Q9NX47 278 aa11.65□□□□□ -0.54
CDC42SE1-206ENST00000492796 CLDND1Q9NY35 253 aa11.65□□□□□ -0.54
CDC42SE1-206ENST00000492796 CNTN3Q9P232 1028 aa11.65□□□□□ -0.54
CDC42SE1-206ENST00000492796 USP25Q9UHP3 1055 aa11.65□□□□□ -0.54
CDC42SE1-206ENST00000492796 EXOC7Q9UPT5 735 aa11.65□□□□□ -0.54
CDC42SE1-206ENST00000492796 PRG3Q9Y2Y8 225 aaPredicted RBP11.65□□□□□ -0.54
CDC42SE1-206ENST00000492796 PCDHB13Q9Y5F0 798 aa11.65□□□□□ -0.54
CDC42SE1-206ENST00000492796 PCDHGC5Q9Y5F6 944 aa11.65□□□□□ -0.54
CDC42SE1-206ENST00000492796 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.65□□□□□ -0.54
CDC42SE1-206ENST00000492796 IRAK3Q9Y616 596 aa11.65□□□□□ -0.54
CDC42SE1-206ENST00000492796 FAM237AA0A1B0GTK4 181 aa11.64□□□□□ -0.55
CDC42SE1-206ENST00000492796 A0A1W2PQ27 194 aa11.64□□□□□ -0.55
CDC42SE1-206ENST00000492796 A0A1W2PQ64 194 aa11.64□□□□□ -0.55
CDC42SE1-206ENST00000492796 A0A1W2PQD8 194 aa11.64□□□□□ -0.55
CDC42SE1-206ENST00000492796 GCNT3O95395 438 aa11.64□□□□□ -0.55
CDC42SE1-206ENST00000492796 SOD2P04179 222 aa11.64□□□□□ -0.55
CDC42SE1-206ENST00000492796 CLTAP09496 248 aa11.64□□□□□ -0.55
CDC42SE1-206ENST00000492796 SRGAP2BP0DMP2 458 aa11.64□□□□□ -0.55
CDC42SE1-206ENST00000492796 PFKFB1P16118 471 aa11.64□□□□□ -0.55
CDC42SE1-206ENST00000492796 KCNA5P22460 613 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms