RNA–Protein interactions for RNA: ENST00000492657.5

PRAME-213, Transcript of preferentially expressed antigen in melanoma, humanhuman

TSL 1 (best)

Gene PRAME, Length 2,831 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-213ENST00000492657 TEX13BQ9BXU2 312 aa13.83□□□□□ -0.19
PRAME-213ENST00000492657 POLR3FQ9H1D9 316 aaPredicted RBP13.83□□□□□ -0.19
PRAME-213ENST00000492657 TMEM8AQ9HCN3 771 aa13.83□□□□□ -0.19
PRAME-213ENST00000492657 RAB20Q9NX57 234 aa13.83□□□□□ -0.19
PRAME-213ENST00000492657 RTN2O75298 545 aa13.83□□□□□ -0.2
PRAME-213ENST00000492657 HSD17B3P37058 310 aa13.83□□□□□ -0.2
PRAME-213ENST00000492657 HSPA9P38646 679 aaKnown RBP13.83□□□□□ -0.2
PRAME-213ENST00000492657 MMS22LQ6ZRQ5 1243 aa13.83□□□□□ -0.2
PRAME-213ENST00000492657 MAATS1Q7Z4T9 603 aa13.83□□□□□ -0.2
PRAME-213ENST00000492657 FMNL3Q8IVF7 1028 aa13.83□□□□□ -0.2
PRAME-213ENST00000492657 ZDHHC14Q8IZN3 488 aa13.83□□□□□ -0.2
PRAME-213ENST00000492657 RDM1Q8NG50 284 aa13.83□□□□□ -0.2
PRAME-213ENST00000492657 FAM107BQ9H098 131 aa13.83□□□□□ -0.2
PRAME-213ENST00000492657 ACAD9Q9H845 621 aa13.83□□□□□ -0.2
PRAME-213ENST00000492657 GGA3Q9NZ52 723 aa13.83□□□□□ -0.2
PRAME-213ENST00000492657 ZNFX1Q9P2E3 1918 aaKnown RBP13.83□□□□□ -0.2
PRAME-213ENST00000492657 SPDYE16A6NNV3 312 aaPredicted RBP13.82□□□□□ -0.2
PRAME-213ENST00000492657 ZEB2O60315 1214 aa13.82□□□□□ -0.2
PRAME-213ENST00000492657 ECM2O94769 699 aaPredicted RBP13.82□□□□□ -0.2
PRAME-213ENST00000492657 CYP11B1P15538 503 aa13.82□□□□□ -0.2
PRAME-213ENST00000492657 HNRNPH1P31943 449 aaKnown RBP13.82□□□□□ -0.2
PRAME-213ENST00000492657 HIRAP54198 1017 aaPredicted RBP13.82□□□□□ -0.2
PRAME-213ENST00000492657 SNRPFP62306 86 aaKnown RBP13.82□□□□□ -0.2
PRAME-213ENST00000492657 RHOT2Q8IXI1 618 aa13.82□□□□□ -0.2
PRAME-213ENST00000492657 FBXL13Q8NEE6 735 aa13.82□□□□□ -0.2
PRAME-213ENST00000492657 CNKSR2Q8WXI2 1034 aa13.82□□□□□ -0.2
PRAME-213ENST00000492657 FBXL18Q96ME1 805 aa13.82□□□□□ -0.2
PRAME-213ENST00000492657 SLITRK6Q9H5Y7 841 aa13.82□□□□□ -0.2
PRAME-213ENST00000492657 COQ4Q9Y3A0 265 aa13.82□□□□□ -0.2
PRAME-213ENST00000492657 DAAM1Q9Y4D1 1078 aa13.82□□□□□ -0.2
PRAME-213ENST00000492657 BRCA1P38398 1863 aaKnown RBP13.82□□□□□ -0.2
PRAME-213ENST00000492657 SPATA31C2B4DYI2 1134 aa13.82□□□□□ -0.2
PRAME-213ENST00000492657 EBAG9O00559 213 aa13.82□□□□□ -0.2
PRAME-213ENST00000492657 CUL1Q13616 776 aa13.82□□□□□ -0.2
PRAME-213ENST00000492657 SEPT14Q6ZU15 432 aa13.82□□□□□ -0.2
PRAME-213ENST00000492657 CCDC26Q8TAB7 109 aa13.82□□□□□ -0.2
PRAME-213ENST00000492657 ZBTB45Q96K62 511 aaPredicted RBP13.82□□□□□ -0.2
PRAME-213ENST00000492657 C12orf42Q96LP6 360 aa13.82□□□□□ -0.2
PRAME-213ENST00000492657 NT5C1BQ96P26 610 aa13.82□□□□□ -0.2
PRAME-213ENST00000492657 CARD9Q9H257 536 aa13.82□□□□□ -0.2
PRAME-213ENST00000492657 PNMA2Q9UL42 364 aa13.82□□□□□ -0.2
PRAME-213ENST00000492657 TTC7AQ9ULT0 858 aaPredicted RBP13.82□□□□□ -0.2
PRAME-213ENST00000492657 PMM2O15305 246 aa13.82□□□□□ -0.2
PRAME-213ENST00000492657 EIF3HO15372 352 aaKnown RBP eCLIP13.82□□□□□ -0.2
PRAME-213ENST00000492657 MAFGO15525 162 aa13.82□□□□□ -0.2
PRAME-213ENST00000492657 DGAT1O75907 488 aa13.82□□□□□ -0.2
PRAME-213ENST00000492657 KRT5P13647 590 aa13.82□□□□□ -0.2
PRAME-213ENST00000492657 ACOT2P49753 483 aa13.82□□□□□ -0.2
PRAME-213ENST00000492657 GPC3P51654 580 aa13.82□□□□□ -0.2
PRAME-213ENST00000492657 CEP85LQ5SZL2 805 aa13.82□□□□□ -0.2
PRAME-213ENST00000492657 NUP85Q9BW27 656 aa13.82□□□□□ -0.2
PRAME-213ENST00000492657 CENPHQ9H3R5 247 aa13.82□□□□□ -0.2
PRAME-213ENST00000492657 YY1AP1Q9H869 796 aa13.82□□□□□ -0.2
PRAME-213ENST00000492657 TRPC6Q9Y210 931 aa13.82□□□□□ -0.2
PRAME-213ENST00000492657 CAPN7Q9Y6W3 813 aa13.82□□□□□ -0.2
PRAME-213ENST00000492657 TCRBV7S2A1N4TA0A589 114 aa13.81□□□□□ -0.2
PRAME-213ENST00000492657 C2CD6Q53TS8 623 aa13.81□□□□□ -0.2
PRAME-213ENST00000492657 SCARA3Q6AZY7 606 aa13.81□□□□□ -0.2
PRAME-213ENST00000492657 GPD1LQ8N335 351 aa13.81□□□□□ -0.2
PRAME-213ENST00000492657 SLC17A8Q8NDX2 589 aa13.81□□□□□ -0.2
PRAME-213ENST00000492657 TMC2Q8TDI7 906 aa13.81□□□□□ -0.2
PRAME-213ENST00000492657 ASAP3Q8TDY4 903 aa13.81□□□□□ -0.2
PRAME-213ENST00000492657 DDX1Q92499 740 aaKnown RBP13.81□□□□□ -0.2
PRAME-213ENST00000492657 JPH2Q9BR39 696 aaPredicted RBP13.81□□□□□ -0.2
PRAME-213ENST00000492657 ATP6V0A4Q9HBG4 840 aa13.81□□□□□ -0.2
PRAME-213ENST00000492657 LRRC4CQ9HCJ2 640 aa13.81□□□□□ -0.2
PRAME-213ENST00000492657 GRIN2DO15399 1336 aa13.81□□□□□ -0.2
PRAME-213ENST00000492657 A0A087WUV0 522 aaPredicted RBP13.81□□□□□ -0.2
PRAME-213ENST00000492657 C19orf81C9J6K1 198 aa13.81□□□□□ -0.2
PRAME-213ENST00000492657 GRIN3BO60391 1043 aa13.81□□□□□ -0.2
PRAME-213ENST00000492657 SUPT20HL2P0C7V6 817 aa13.81□□□□□ -0.2
PRAME-213ENST00000492657 OAZ1P54368 228 aa13.81□□□□□ -0.2
PRAME-213ENST00000492657 SF3A3Q12874 501 aaKnown RBP eCLIP13.81□□□□□ -0.2
PRAME-213ENST00000492657 SUPT20HL1Q3ZLR7 823 aa13.81□□□□□ -0.2
PRAME-213ENST00000492657 ZBTB41Q5SVQ8 909 aa13.81□□□□□ -0.2
PRAME-213ENST00000492657 SPOPLQ6IQ16 392 aa13.81□□□□□ -0.2
PRAME-213ENST00000492657 LLGL2Q6P1M3 1020 aa13.81□□□□□ -0.2
PRAME-213ENST00000492657 MCPH1Q8NEM0 835 aa13.81□□□□□ -0.2
PRAME-213ENST00000492657 ATP8B4Q8TF62 1192 aa13.81□□□□□ -0.2
PRAME-213ENST00000492657 ZNF653Q96CK0 615 aa13.81□□□□□ -0.2
PRAME-213ENST00000492657 HVCN1Q96D96 273 aa13.81□□□□□ -0.2
PRAME-213ENST00000492657 IFT74Q96LB3 600 aa13.81□□□□□ -0.2
PRAME-213ENST00000492657 ZSWIM1Q9BR11 485 aa13.81□□□□□ -0.2
PRAME-213ENST00000492657 HAPLN2Q9GZV7 340 aa13.81□□□□□ -0.2
PRAME-213ENST00000492657 R3HDMLQ9H3Y0 253 aa13.81□□□□□ -0.2
PRAME-213ENST00000492657 AFG3L2Q9Y4W6 797 aa13.81□□□□□ -0.2
PRAME-213ENST00000492657 ARID2Q68CP9 1835 aa13.8□□□□□ -0.2
PRAME-213ENST00000492657 PYGMP11217 842 aa13.8□□□□□ -0.2
PRAME-213ENST00000492657 SSTR3P32745 418 aaPredicted RBP13.8□□□□□ -0.2
PRAME-213ENST00000492657 PEX5P50542 639 aa13.8□□□□□ -0.2
PRAME-213ENST00000492657 HADHBP55084 474 aaKnown RBP13.8□□□□□ -0.2
PRAME-213ENST00000492657 NLRP11P59045 1033 aaKnown RBP13.8□□□□□ -0.2
PRAME-213ENST00000492657 MCCD1P59942 119 aaPredicted RBP13.8□□□□□ -0.2
PRAME-213ENST00000492657 PTENP60484 403 aa13.8□□□□□ -0.2
PRAME-213ENST00000492657 EMC2Q15006 297 aa13.8□□□□□ -0.2
PRAME-213ENST00000492657 TREML2Q5T2D2 321 aa13.8□□□□□ -0.2
PRAME-213ENST00000492657 ZNF564Q8TBZ8 553 aaPredicted RBP13.8□□□□□ -0.2
PRAME-213ENST00000492657 VTI1AQ96AJ9 217 aa13.8□□□□□ -0.2
PRAME-213ENST00000492657 C18orf8Q96DM3 657 aa13.8□□□□□ -0.2
PRAME-213ENST00000492657 TRIM7Q9C029 511 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms