RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 DYDC2Q96IM9 177 aa3.89□□□□□ -1.79
HMGB1P30-201ENST00000492455 RAX2Q96IS3 184 aa3.89□□□□□ -1.79
HMGB1P30-201ENST00000492455 NOL10Q9BSC4 688 aaKnown RBP3.89□□□□□ -1.79
HMGB1P30-201ENST00000492455 GPR87Q9BY21 358 aa3.89□□□□□ -1.79
HMGB1P30-201ENST00000492455 IFT122Q9HBG6 1241 aa3.89□□□□□ -1.79
HMGB1P30-201ENST00000492455 AASDHPPTQ9NRN7 309 aa3.89□□□□□ -1.79
HMGB1P30-201ENST00000492455 ZIM2Q9NZV7 527 aa3.89□□□□□ -1.79
HMGB1P30-201ENST00000492455 SERPINB13Q9UIV8 391 aa3.89□□□□□ -1.79
HMGB1P30-201ENST00000492455 USP18Q9UMW8 372 aa3.89□□□□□ -1.79
HMGB1P30-201ENST00000492455 LUC7L2Q9Y383 392 aaKnown RBP3.89□□□□□ -1.79
HMGB1P30-201ENST00000492455 SH3BP1Q9Y3L3 701 aa3.89□□□□□ -1.79
HMGB1P30-201ENST00000492455 KLHL33A6NCF5 533 aa3.88□□□□□ -1.79
HMGB1P30-201ENST00000492455 B3GALT2O43825 422 aa3.88□□□□□ -1.79
HMGB1P30-201ENST00000492455 MARCH6O60337 910 aa3.88□□□□□ -1.79
HMGB1P30-201ENST00000492455 FAM20BO75063 409 aa3.88□□□□□ -1.79
HMGB1P30-201ENST00000492455 HNRNPLP14866 589 aaKnown RBP eCLIP3.88□□□□□ -1.79
HMGB1P30-201ENST00000492455 RECQLP46063 649 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P30-201ENST00000492455 GPR15P49685 360 aa3.88□□□□□ -1.79
HMGB1P30-201ENST00000492455 CDK17Q00537 523 aa3.88□□□□□ -1.79
HMGB1P30-201ENST00000492455 PPP3CAQ08209 521 aa3.88□□□□□ -1.79
HMGB1P30-201ENST00000492455 ADRM1Q16186 407 aa3.88□□□□□ -1.79
HMGB1P30-201ENST00000492455 Q6ZRM9 215 aa3.88□□□□□ -1.79
HMGB1P30-201ENST00000492455 RD3Q7Z3Z2 195 aa3.88□□□□□ -1.79
HMGB1P30-201ENST00000492455 FMNL3Q8IVF7 1028 aa3.88□□□□□ -1.79
HMGB1P30-201ENST00000492455 ZNF276Q8N554 614 aa3.88□□□□□ -1.79
HMGB1P30-201ENST00000492455 PIK3C3Q8NEB9 887 aa3.88□□□□□ -1.79
HMGB1P30-201ENST00000492455 RSAD2Q8WXG1 361 aa3.88□□□□□ -1.79
HMGB1P30-201ENST00000492455 CAMKK2Q96RR4 588 aa3.88□□□□□ -1.79
HMGB1P30-201ENST00000492455 POLR3BQ9NW08 1133 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P30-201ENST00000492455 CHPF2Q9P2E5 772 aa3.88□□□□□ -1.79
HMGB1P30-201ENST00000492455 IP6K2Q9UHH9 426 aa3.88□□□□□ -1.79
HMGB1P30-201ENST00000492455 DNAI1Q9UI46 699 aa3.88□□□□□ -1.79
HMGB1P30-201ENST00000492455 KCNG1Q9UIX4 513 aa3.88□□□□□ -1.79
HMGB1P30-201ENST00000492455 A0A1W2PR48 441 aa3.87□□□□□ -1.79
HMGB1P30-201ENST00000492455 E2F8A0AVK6 867 aa3.87□□□□□ -1.79
HMGB1P30-201ENST00000492455 C2orf78A6NCI8 922 aa3.87□□□□□ -1.79
HMGB1P30-201ENST00000492455 XPOTO43592 962 aaKnown RBP3.87□□□□□ -1.79
HMGB1P30-201ENST00000492455 NDUFS2O75306 463 aa3.87□□□□□ -1.79
HMGB1P30-201ENST00000492455 RFPL1O75677 317 aa3.87□□□□□ -1.79
HMGB1P30-201ENST00000492455 LY86O95711 162 aa3.87□□□□□ -1.79
HMGB1P30-201ENST00000492455 GAAP10253 952 aa3.87□□□□□ -1.79
HMGB1P30-201ENST00000492455 EDNRBP24530 442 aa3.87□□□□□ -1.79
HMGB1P30-201ENST00000492455 FXR1P51114 621 aaKnown RBP eCLIP3.87□□□□□ -1.79
HMGB1P30-201ENST00000492455 ADAM8P78325 824 aa3.87□□□□□ -1.79
HMGB1P30-201ENST00000492455 CCT2P78371 535 aaKnown RBP3.87□□□□□ -1.79
HMGB1P30-201ENST00000492455 HGFACQ04756 655 aa3.87□□□□□ -1.79
HMGB1P30-201ENST00000492455 CD69Q07108 199 aa3.87□□□□□ -1.79
HMGB1P30-201ENST00000492455 MAP3K12Q12852 859 aa3.87□□□□□ -1.79
HMGB1P30-201ENST00000492455 CLUL1Q15846 466 aa3.87□□□□□ -1.79
HMGB1P30-201ENST00000492455 ANO4Q32M45 955 aa3.87□□□□□ -1.79
HMGB1P30-201ENST00000492455 CCDC178Q5BJE1 867 aa3.87□□□□□ -1.79
HMGB1P30-201ENST00000492455 HECTD2Q5U5R9 776 aa3.87□□□□□ -1.79
HMGB1P30-201ENST00000492455 MICALCLQ6ZW33 695 aa3.87□□□□□ -1.79
HMGB1P30-201ENST00000492455 CLEC14AQ86T13 490 aa3.87□□□□□ -1.79
HMGB1P30-201ENST00000492455 PNMA8AQ86V59 439 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P30-201ENST00000492455 AMOTL1Q8IY63 956 aa3.87□□□□□ -1.79
HMGB1P30-201ENST00000492455 MSL3Q8N5Y2 521 aaKnown RBP3.87□□□□□ -1.79
HMGB1P30-201ENST00000492455 OR2I1PQ8NGU4 316 aa3.87□□□□□ -1.79
HMGB1P30-201ENST00000492455 JPH3Q8WXH2 748 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P30-201ENST00000492455 SSH1Q8WYL5 1049 aa3.87□□□□□ -1.79
HMGB1P30-201ENST00000492455 HOXB13Q92826 284 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P30-201ENST00000492455 NELL1Q92832 810 aa3.87□□□□□ -1.79
HMGB1P30-201ENST00000492455 HIST1H2AHQ96KK5 128 aa3.87□□□□□ -1.79
HMGB1P30-201ENST00000492455 HIST1H2AJQ99878 128 aa3.87□□□□□ -1.79
HMGB1P30-201ENST00000492455 OSBPL6Q9BZF3 934 aa3.87□□□□□ -1.79
HMGB1P30-201ENST00000492455 TOR3AQ9H497 397 aa3.87□□□□□ -1.79
HMGB1P30-201ENST00000492455 CYP4F11Q9HBI6 524 aa3.87□□□□□ -1.79
HMGB1P30-201ENST00000492455 DMRT3Q9NQL9 472 aa3.87□□□□□ -1.79
HMGB1P30-201ENST00000492455 SAE1Q9UBE0 346 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P30-201ENST00000492455 ZNF180Q9UJW8 692 aa3.87□□□□□ -1.79
HMGB1P30-201ENST00000492455 CTDP1Q9Y5B0 961 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P30-201ENST00000492455 KIAA0355O15063 1070 aa3.86□□□□□ -1.79
HMGB1P30-201ENST00000492455 SNUPNO95149 360 aaKnown RBP3.86□□□□□ -1.79
HMGB1P30-201ENST00000492455 ITGB1P05556 798 aa3.86□□□□□ -1.79
HMGB1P30-201ENST00000492455 PF4V1P10720 104 aa3.86□□□□□ -1.79
HMGB1P30-201ENST00000492455 MTHFD2P13995 350 aa3.86□□□□□ -1.79
HMGB1P30-201ENST00000492455 ZSCAN20P17040 1043 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P30-201ENST00000492455 MGAT5Q09328 741 aa3.86□□□□□ -1.79
HMGB1P30-201ENST00000492455 SPIDRQ14159 915 aa3.86□□□□□ -1.79
HMGB1P30-201ENST00000492455 ACAP2Q15057 778 aa3.86□□□□□ -1.79
HMGB1P30-201ENST00000492455 PPP2R5AQ15172 486 aa3.86□□□□□ -1.79
HMGB1P30-201ENST00000492455 RABL3Q5HYI8 236 aa3.86□□□□□ -1.79
HMGB1P30-201ENST00000492455 FAM102BQ5T8I3 360 aa3.86□□□□□ -1.79
HMGB1P30-201ENST00000492455 OLFML1Q6UWY5 402 aa3.86□□□□□ -1.79
HMGB1P30-201ENST00000492455 TPH2Q8IWU9 490 aa3.86□□□□□ -1.79
HMGB1P30-201ENST00000492455 LILRA3Q8N6C8 439 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P30-201ENST00000492455 GLB1L3Q8NCI6 653 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P30-201ENST00000492455 RABGGTAQ92696 567 aa3.86□□□□□ -1.79
HMGB1P30-201ENST00000492455 WDR92Q96MX6 357 aa3.86□□□□□ -1.79
HMGB1P30-201ENST00000492455 AGO3Q9H9G7 860 aaKnown RBP3.86□□□□□ -1.79
HMGB1P30-201ENST00000492455 ANLNQ9NQW6 1124 aa3.86□□□□□ -1.79
HMGB1P30-201ENST00000492455 ZBTB21Q9ULJ3 1066 aa3.86□□□□□ -1.79
HMGB1P30-201ENST00000492455 COX11Q9Y6N1 276 aa3.86□□□□□ -1.79
HMGB1P30-201ENST00000492455 GOLGA6L6A8MZA4 724 aa3.85□□□□□ -1.79
HMGB1P30-201ENST00000492455 WNT10BO00744 389 aa3.85□□□□□ -1.79
HMGB1P30-201ENST00000492455 MCAMP43121 646 aa3.85□□□□□ -1.79
HMGB1P30-201ENST00000492455 SLC5A3P53794 718 aa3.85□□□□□ -1.79
HMGB1P30-201ENST00000492455 ADKP55263 362 aaKnown RBP3.85□□□□□ -1.79
HMGB1P30-201ENST00000492455 TAP1Q03518 808 aa3.85□□□□□ -1.79
HMGB1P30-201ENST00000492455 MALLQ13021 153 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms