RNA–Protein interactions for RNA: ENST00000491382.1

PFDN6-207, Transcript of prefoldin subunit 6, humanhuman

TSL 2

Gene PFDN6, Length 989 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-207ENST00000491382 SRGAP2BP0DMP2 458 aa17.56■□□□□ 0.4
PFDN6-207ENST00000491382 PROZP22891 400 aa17.56■□□□□ 0.4
PFDN6-207ENST00000491382 GTF2F1P35269 517 aaKnown RBP eCLIP17.56■□□□□ 0.47e-12■■■■□ 21.5
PFDN6-207ENST00000491382 GRM5P41594 1212 aa17.56■□□□□ 0.4
PFDN6-207ENST00000491382 NDUFV1P49821 464 aa17.56■□□□□ 0.4
PFDN6-207ENST00000491382 KCNQ1P51787 676 aa17.56■□□□□ 0.4
PFDN6-207ENST00000491382 PUS10Q3MIT2 529 aaKnown RBP17.56■□□□□ 0.4
PFDN6-207ENST00000491382 TMEM87AQ8NBN3 555 aa17.56■□□□□ 0.4
PFDN6-207ENST00000491382 COLEC11Q9BWP8 271 aa17.56■□□□□ 0.4
PFDN6-207ENST00000491382 LRRC27Q9C0I9 530 aa17.56■□□□□ 0.4
PFDN6-207ENST00000491382 CUEDC2Q9H467 287 aa17.56■□□□□ 0.4
PFDN6-207ENST00000491382 ANKFY1Q9P2R3 1169 aa17.56■□□□□ 0.4
PFDN6-207ENST00000491382 SEL1LQ9UBV2 794 aa17.56■□□□□ 0.4
PFDN6-207ENST00000491382 PRG3Q9Y2Y8 225 aaPredicted RBP17.56■□□□□ 0.4
PFDN6-207ENST00000491382 CITO14578 2027 aa17.55■□□□□ 0.4
PFDN6-207ENST00000491382 A0A087X0B3 334 aa17.55■□□□□ 0.4
PFDN6-207ENST00000491382 DLL1O00548 723 aa17.55■□□□□ 0.4
PFDN6-207ENST00000491382 HNRNPDLO14979 420 aaKnown RBP17.55■□□□□ 0.4
PFDN6-207ENST00000491382 CLDN3O15551 220 aa17.55■□□□□ 0.4
PFDN6-207ENST00000491382 GAP43P17677 238 aa17.55■□□□□ 0.4
PFDN6-207ENST00000491382 MATR3P43243 847 aaKnown RBP eCLIP17.55■□□□□ 0.4
PFDN6-207ENST00000491382 LIG4P49917 911 aa17.55■□□□□ 0.4
PFDN6-207ENST00000491382 KRT85P78386 507 aa17.55■□□□□ 0.4
PFDN6-207ENST00000491382 ADAM15Q13444 863 aa17.55■□□□□ 0.4
PFDN6-207ENST00000491382 TUSC3Q13454 348 aa17.55■□□□□ 0.4
PFDN6-207ENST00000491382 NOLC1Q14978 699 aaKnown RBP eCLIP17.55■□□□□ 0.4
PFDN6-207ENST00000491382 DUSP6Q16828 381 aa17.55■□□□□ 0.4
PFDN6-207ENST00000491382 ZBTB33Q86T24 672 aa17.55■□□□□ 0.4
PFDN6-207ENST00000491382 MRPL43Q8N983 215 aaKnown RBP17.55■□□□□ 0.4
PFDN6-207ENST00000491382 IQUBQ8NA54 791 aa17.55■□□□□ 0.4
PFDN6-207ENST00000491382 ADAMTS19Q8TE59 1207 aa17.55■□□□□ 0.4
PFDN6-207ENST00000491382 BCL7CQ8WUZ0 217 aaPredicted RBP17.55■□□□□ 0.4
PFDN6-207ENST00000491382 COL25A1Q9BXS0 654 aaPredicted RBP17.55■□□□□ 0.4
PFDN6-207ENST00000491382 ZBP1Q9H171 429 aa17.55■□□□□ 0.4
PFDN6-207ENST00000491382 TNMDQ9H2S6 317 aa17.55■□□□□ 0.4
PFDN6-207ENST00000491382 FAM13BQ9NYF5 915 aa17.55■□□□□ 0.4
PFDN6-207ENST00000491382 TBX20Q9UMR3 447 aa17.55■□□□□ 0.4
PFDN6-207ENST00000491382 FAM50BQ9Y247 325 aa17.55■□□□□ 0.4
PFDN6-207ENST00000491382 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.54■□□□□ 0.4
PFDN6-207ENST00000491382 MYMKA6NI61 221 aa17.54■□□□□ 0.4
PFDN6-207ENST00000491382 HIDE1A8MVS5 230 aa17.54■□□□□ 0.4
PFDN6-207ENST00000491382 H3BQ06 376 aaPredicted RBP17.54■□□□□ 0.4
PFDN6-207ENST00000491382 PTGESO14684 152 aa17.54■□□□□ 0.4
PFDN6-207ENST00000491382 PER2O15055 1255 aa17.54■□□□□ 0.4
PFDN6-207ENST00000491382 CXCL14O95715 111 aa17.54■□□□□ 0.4
PFDN6-207ENST00000491382 CTSAP10619 480 aa17.54■□□□□ 0.4
PFDN6-207ENST00000491382 HARSP12081 509 aaKnown RBP17.54■□□□□ 0.4
PFDN6-207ENST00000491382 BMP1P13497 986 aa17.54■□□□□ 0.4
PFDN6-207ENST00000491382 AMPD3Q01432 767 aa17.54■□□□□ 0.4
PFDN6-207ENST00000491382 AXDND1Q5T1B0 1012 aaPredicted RBP17.54■□□□□ 0.4
PFDN6-207ENST00000491382 SHC4Q6S5L8 630 aa17.54■□□□□ 0.4
PFDN6-207ENST00000491382 ACAP3Q96P50 834 aa17.54■□□□□ 0.4
PFDN6-207ENST00000491382 PYM1Q9BRP8 204 aaKnown RBP17.54■□□□□ 0.4
PFDN6-207ENST00000491382 RCOR1Q9UKL0 485 aa17.54■□□□□ 0.4
PFDN6-207ENST00000491382 PCDHA7Q9UN72 937 aa17.54■□□□□ 0.4
PFDN6-207ENST00000491382 IRAK3Q9Y616 596 aa17.54■□□□□ 0.4
PFDN6-207ENST00000491382 TRIP11Q15643 1979 aa17.53■□□□□ 0.4
PFDN6-207ENST00000491382 TCF20Q9UGU0 1960 aaKnown RBP17.53■□□□□ 0.4
PFDN6-207ENST00000491382 XIRP2A4UGR9 3374 aa17.53■□□□□ 0.4
PFDN6-207ENST00000491382 C2orf71A6NGG8 1288 aa17.53■□□□□ 0.4
PFDN6-207ENST00000491382 ABLIM1O14639 778 aa17.53■□□□□ 0.4
PFDN6-207ENST00000491382 LINC01565O15544 149 aa17.53■□□□□ 0.4
PFDN6-207ENST00000491382 TBX10O75333 385 aa17.53■□□□□ 0.4
PFDN6-207ENST00000491382 IDEP14735 1019 aa17.53■□□□□ 0.4
PFDN6-207ENST00000491382 LTBRP36941 435 aa17.53■□□□□ 0.4
PFDN6-207ENST00000491382 OSTNP61366 133 aa17.53■□□□□ 0.4
PFDN6-207ENST00000491382 GTF2BQ00403 316 aa17.53■□□□□ 0.4
PFDN6-207ENST00000491382 MCL1Q07820 350 aa17.53■□□□□ 0.4
PFDN6-207ENST00000491382 PTCRAQ6ISU1 281 aaPredicted RBP17.53■□□□□ 0.4
PFDN6-207ENST00000491382 SFR1Q86XK3 245 aa17.53■□□□□ 0.4
PFDN6-207ENST00000491382 CEP120Q8N960 986 aa17.53■□□□□ 0.4
PFDN6-207ENST00000491382 DHX58Q96C10 678 aa17.53■□□□□ 0.4
PFDN6-207ENST00000491382 HVCN1Q96D96 273 aa17.53■□□□□ 0.4
PFDN6-207ENST00000491382 DNAJC19Q96DA6 116 aa17.53■□□□□ 0.4
PFDN6-207ENST00000491382 SPATA32Q96LK8 384 aa17.53■□□□□ 0.4
PFDN6-207ENST00000491382 ST6GALNAC4Q9H4F1 302 aa17.53■□□□□ 0.4
PFDN6-207ENST00000491382 MRPL44Q9H9J2 332 aaKnown RBP17.53■□□□□ 0.4
PFDN6-207ENST00000491382 MAGEF1Q9HAY2 307 aa17.53■□□□□ 0.4
PFDN6-207ENST00000491382 MARCH5Q9NX47 278 aa17.53■□□□□ 0.4
PFDN6-207ENST00000491382 SSX2IPQ9Y2D8 614 aa17.53■□□□□ 0.4
PFDN6-207ENST00000491382 ZDHHC9Q9Y397 364 aa17.53■□□□□ 0.4
PFDN6-207ENST00000491382 BRWD1Q9NSI6 2320 aa17.52■□□□□ 0.4
PFDN6-207ENST00000491382 PIGRP01833 764 aa17.52■□□□□ 0.4
PFDN6-207ENST00000491382 SOD2P04179 222 aa17.52■□□□□ 0.4
PFDN6-207ENST00000491382 URODP06132 367 aa17.52■□□□□ 0.4
PFDN6-207ENST00000491382 NMT1P30419 496 aaKnown RBP17.52■□□□□ 0.4
PFDN6-207ENST00000491382 HSP90AA2PQ14568 343 aaPredicted RBP17.52■□□□□ 0.4
PFDN6-207ENST00000491382 E2F4Q16254 413 aa17.52■□□□□ 0.4
PFDN6-207ENST00000491382 KYAT1Q16773 422 aa17.52■□□□□ 0.4
PFDN6-207ENST00000491382 RESP18Q5W5W9 173 aa17.52■□□□□ 0.4
PFDN6-207ENST00000491382 MAP4K3Q8IVH8 894 aa17.52■□□□□ 0.4
PFDN6-207ENST00000491382 CCDC65Q8IXS2 484 aa17.52■□□□□ 0.4
PFDN6-207ENST00000491382 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.52■□□□□ 0.4
PFDN6-207ENST00000491382 ZBTB45Q96K62 511 aaPredicted RBP17.52■□□□□ 0.4
PFDN6-207ENST00000491382 FIZ1Q96SL8 496 aa17.52■□□□□ 0.4
PFDN6-207ENST00000491382 HERC2P3Q9BVR0 1158 aa17.52■□□□□ 0.4
PFDN6-207ENST00000491382 VN1R3Q9BXE9 311 aa17.52■□□□□ 0.4
PFDN6-207ENST00000491382 OLFML3Q9NRN5 406 aa17.52■□□□□ 0.4
PFDN6-207ENST00000491382 MRPL17Q9NRX2 175 aaKnown RBP17.52■□□□□ 0.4
PFDN6-207ENST00000491382 SLC38A7Q9NVC3 462 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms