RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 NMRK1Q9NWW6 199 aa11.99□□□□□ -0.49
CRNKL1-204ENST00000490910 ZNF212Q9UDV6 495 aa11.99□□□□□ -0.49
CRNKL1-204ENST00000490910 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.99□□□□□ -0.49
CRNKL1-204ENST00000490910 GOLGA8SH3BPF8 625 aa11.98□□□□□ -0.49
CRNKL1-204ENST00000490910 GOLGA8MH3BSY2 632 aa11.98□□□□□ -0.49
CRNKL1-204ENST00000490910 NT5C2P49902 561 aa11.98□□□□□ -0.49
CRNKL1-204ENST00000490910 BTKQ06187 659 aa11.98□□□□□ -0.49
CRNKL1-204ENST00000490910 MCL1Q07820 350 aa11.98□□□□□ -0.49
CRNKL1-204ENST00000490910 GPS1Q13098 491 aa11.98□□□□□ -0.49
CRNKL1-204ENST00000490910 Q4G0T1 1027 aa11.98□□□□□ -0.49
CRNKL1-204ENST00000490910 RARS2Q5T160 578 aaKnown RBP11.98□□□□□ -0.49
CRNKL1-204ENST00000490910 C16orf87Q6PH81 154 aa11.98□□□□□ -0.49
CRNKL1-204ENST00000490910 WHRNQ9P202 907 aa11.98□□□□□ -0.49
CRNKL1-204ENST00000490910 PSMC3IPQ9P2W1 217 aaPredicted RBP11.98□□□□□ -0.49
CRNKL1-204ENST00000490910 EPS15L1Q9UBC2 864 aa11.98□□□□□ -0.49
CRNKL1-204ENST00000490910 RPL26L1Q9UNX3 145 aaKnown RBP11.98□□□□□ -0.49
CRNKL1-204ENST00000490910 SFI1A8K8P3 1242 aa11.98□□□□□ -0.49
CRNKL1-204ENST00000490910 KRT1P04264 644 aa11.98□□□□□ -0.49
CRNKL1-204ENST00000490910 TMED10P49755 219 aaKnown RBP11.98□□□□□ -0.49
CRNKL1-204ENST00000490910 BASP1P80723 227 aaKnown RBP11.98□□□□□ -0.49
CRNKL1-204ENST00000490910 TRIM28Q13263 835 aaKnown RBP11.98□□□□□ -0.49
CRNKL1-204ENST00000490910 ASPRV1Q53RT3 343 aa11.98□□□□□ -0.49
CRNKL1-204ENST00000490910 EMC10Q5UCC4 262 aa11.98□□□□□ -0.49
CRNKL1-204ENST00000490910 GJB7Q6PEY0 223 aa11.98□□□□□ -0.49
CRNKL1-204ENST00000490910 DRAXINQ8NBI3 349 aaPredicted RBP11.98□□□□□ -0.49
CRNKL1-204ENST00000490910 FOXP3Q9BZS1 431 aa11.98□□□□□ -0.49
CRNKL1-204ENST00000490910 MMADHCQ9H3L0 296 aaPredicted RBP11.98□□□□□ -0.49
CRNKL1-204ENST00000490910 PCIF1Q9H4Z3 704 aa11.98□□□□□ -0.49
CRNKL1-204ENST00000490910 PARVGQ9HBI0 331 aa11.98□□□□□ -0.49
CRNKL1-204ENST00000490910 ARHGEF3Q9NR81 526 aa11.98□□□□□ -0.49
CRNKL1-204ENST00000490910 RTCBQ9Y3I0 505 aaKnown RBP11.98□□□□□ -0.49
CRNKL1-204ENST00000490910 MYH10P35580 1976 aa11.98□□□□□ -0.49
CRNKL1-204ENST00000490910 FAM205AQ6ZU69 1335 aa11.98□□□□□ -0.49
CRNKL1-204ENST00000490910 CHD2O14647 1828 aaKnown RBP11.98□□□□□ -0.49
CRNKL1-204ENST00000490910 KIAA0391O15091 583 aaKnown RBP11.98□□□□□ -0.49
CRNKL1-204ENST00000490910 LGR5O75473 907 aa11.98□□□□□ -0.49
CRNKL1-204ENST00000490910 KRT37O76014 449 aa11.98□□□□□ -0.49
CRNKL1-204ENST00000490910 PSMG1O95456 288 aa11.98□□□□□ -0.49
CRNKL1-204ENST00000490910 TRIM49P0CI25 452 aa11.98□□□□□ -0.49
CRNKL1-204ENST00000490910 TRIM49CP0CI26 452 aa11.98□□□□□ -0.49
CRNKL1-204ENST00000490910 MX2P20592 715 aa11.98□□□□□ -0.49
CRNKL1-204ENST00000490910 PON1P27169 355 aa11.98□□□□□ -0.49
CRNKL1-204ENST00000490910 ARHGAP4P98171 946 aa11.98□□□□□ -0.49
CRNKL1-204ENST00000490910 KRT81Q14533 505 aa11.98□□□□□ -0.49
CRNKL1-204ENST00000490910 GSTA3Q16772 222 aa11.98□□□□□ -0.49
CRNKL1-204ENST00000490910 TBC1D9BQ66K14 1250 aa11.98□□□□□ -0.49
CRNKL1-204ENST00000490910 DUPD1Q68J44 220 aa11.98□□□□□ -0.49
CRNKL1-204ENST00000490910 CASC4Q6P4E1 433 aa11.98□□□□□ -0.49
CRNKL1-204ENST00000490910 FAM228AQ86W67 206 aa11.98□□□□□ -0.49
CRNKL1-204ENST00000490910 ATP11CQ8NB49 1132 aa11.98□□□□□ -0.49
CRNKL1-204ENST00000490910 ALKBH8Q96BT7 664 aaKnown RBP11.98□□□□□ -0.49
CRNKL1-204ENST00000490910 MRPL47Q9HD33 250 aaKnown RBP11.98□□□□□ -0.49
CRNKL1-204ENST00000490910 KIDINS220Q9ULH0 1771 aa11.98□□□□□ -0.49
CRNKL1-204ENST00000490910 RTN2O75298 545 aa11.97□□□□□ -0.49
CRNKL1-204ENST00000490910 SFSWAPQ12872 951 aaKnown RBP11.97□□□□□ -0.49
CRNKL1-204ENST00000490910 GRB10Q13322 594 aa11.97□□□□□ -0.49
CRNKL1-204ENST00000490910 DDX50Q9BQ39 737 aaKnown RBP11.97□□□□□ -0.49
CRNKL1-204ENST00000490910 CCDC68Q9H2F9 335 aa11.97□□□□□ -0.49
CRNKL1-204ENST00000490910 LRMDAQ9H2I8 198 aa11.97□□□□□ -0.49
CRNKL1-204ENST00000490910 MANSC1Q9H8J5 431 aa11.97□□□□□ -0.49
CRNKL1-204ENST00000490910 SAR1AQ9NR31 198 aa11.97□□□□□ -0.49
CRNKL1-204ENST00000490910 PPP1R1BQ9UD71 204 aaPredicted RBP11.97□□□□□ -0.49
CRNKL1-204ENST00000490910 TMCO1Q9UM00 188 aa11.97□□□□□ -0.49
CRNKL1-204ENST00000490910 C6orf229H3BNL8 230 aa11.97□□□□□ -0.49
CRNKL1-204ENST00000490910 SUPT3HO75486 399 aa11.97□□□□□ -0.49
CRNKL1-204ENST00000490910 RFX1P22670 979 aa11.97□□□□□ -0.49
CRNKL1-204ENST00000490910 DRG2P55039 364 aaKnown RBP11.97□□□□□ -0.49
CRNKL1-204ENST00000490910 CASP7P55210 303 aa11.97□□□□□ -0.49
CRNKL1-204ENST00000490910 SCUBE1Q8IWY4 988 aa11.97□□□□□ -0.49
CRNKL1-204ENST00000490910 PPWD1Q96BP3 646 aaKnown RBP11.97□□□□□ -0.49
CRNKL1-204ENST00000490910 FAM81BQ96LP2 452 aa11.97□□□□□ -0.49
CRNKL1-204ENST00000490910 EPAS1Q99814 870 aa11.97□□□□□ -0.49
CRNKL1-204ENST00000490910 TMEM165Q9HC07 324 aa11.97□□□□□ -0.49
CRNKL1-204ENST00000490910 PKD2L1Q9P0L9 805 aa11.97□□□□□ -0.49
CRNKL1-204ENST00000490910 ABCC6O95255 1503 aa11.97□□□□□ -0.49
CRNKL1-204ENST00000490910 NPHP3-ACAD11A0A0J9YXS1 232 aa11.97□□□□□ -0.49
CRNKL1-204ENST00000490910 POTEFA5A3E0 1075 aa11.97□□□□□ -0.49
CRNKL1-204ENST00000490910 A8MXQ7 604 aa11.97□□□□□ -0.49
CRNKL1-204ENST00000490910 WNT7AO00755 349 aa11.97□□□□□ -0.49
CRNKL1-204ENST00000490910 STRNO43815 780 aa11.97□□□□□ -0.49
CRNKL1-204ENST00000490910 POTEIP0CG38 1075 aa11.97□□□□□ -0.49
CRNKL1-204ENST00000490910 ALDH18A1P54886 795 aaKnown RBP11.97□□□□□ -0.49
CRNKL1-204ENST00000490910 BPIFB4P59827 614 aa11.97□□□□□ -0.49
CRNKL1-204ENST00000490910 TRMT5Q32P41 509 aaKnown RBP11.97□□□□□ -0.49
CRNKL1-204ENST00000490910 USH1GQ495M9 461 aa11.97□□□□□ -0.49
CRNKL1-204ENST00000490910 TMEM259Q4ZIN3 620 aa11.97□□□□□ -0.49
CRNKL1-204ENST00000490910 POTEGQ6S5H5 508 aa11.97□□□□□ -0.49
CRNKL1-204ENST00000490910 POTEEQ6S8J3 1075 aa11.97□□□□□ -0.49
CRNKL1-204ENST00000490910 RNF25Q96BH1 459 aaPredicted RBP11.97□□□□□ -0.49
CRNKL1-204ENST00000490910 DHX36Q9H2U1 1008 aaKnown RBP11.97□□□□□ -0.49
CRNKL1-204ENST00000490910 PPCSQ9HAB8 311 aa11.97□□□□□ -0.49
CRNKL1-204ENST00000490910 TBC1D23Q9NUY8 699 aa11.97□□□□□ -0.49
CRNKL1-204ENST00000490910 BTBD7Q9P203 1132 aa11.97□□□□□ -0.49
CRNKL1-204ENST00000490910 NEU2Q9Y3R4 380 aa11.97□□□□□ -0.49
CRNKL1-204ENST00000490910 PCDHA1Q9Y5I3 950 aa11.97□□□□□ -0.49
CRNKL1-204ENST00000490910 MST1RQ04912 1400 aa11.97□□□□□ -0.49
CRNKL1-204ENST00000490910 GAS7O60861 476 aa11.97□□□□□ -0.49
CRNKL1-204ENST00000490910 KRT36O76013 467 aa11.97□□□□□ -0.49
CRNKL1-204ENST00000490910 CLPTM1O96005 669 aa11.97□□□□□ -0.49
CRNKL1-204ENST00000490910 CSF1RP07333 972 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms