RNA–Protein interactions for RNA: ENST00000490398.5

COL9A3-214, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 4

Gene COL9A3, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-214ENST00000490398 OSTNP61366 133 aa19.91■□□□□ 0.78
COL9A3-214ENST00000490398 SMC1AQ14683 1233 aaKnown RBP19.91■□□□□ 0.78
COL9A3-214ENST00000490398 DCAF4L1Q3SXM0 396 aa19.91■□□□□ 0.78
COL9A3-214ENST00000490398 PDE12Q6L8Q7 609 aaKnown RBP19.91■□□□□ 0.78
COL9A3-214ENST00000490398 PPP2R3CQ969Q6 453 aa19.91■□□□□ 0.78
COL9A3-214ENST00000490398 ADPGKQ9BRR6 497 aa19.91■□□□□ 0.78
COL9A3-214ENST00000490398 MRPL4Q9BYD3 311 aaKnown RBP19.91■□□□□ 0.78
COL9A3-214ENST00000490398 ODF2LQ9ULJ1 636 aa19.91■□□□□ 0.78
COL9A3-214ENST00000490398 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.9■□□□□ 0.78
COL9A3-214ENST00000490398 MYMKA6NI61 221 aa19.9■□□□□ 0.78
COL9A3-214ENST00000490398 SPTLC2O15270 562 aa19.9■□□□□ 0.78
COL9A3-214ENST00000490398 MBTPS2O43462 519 aa19.9■□□□□ 0.78
COL9A3-214ENST00000490398 CTSAP10619 480 aa19.9■□□□□ 0.78
COL9A3-214ENST00000490398 HARSP12081 509 aaKnown RBP19.9■□□□□ 0.78
COL9A3-214ENST00000490398 GRIK3Q13003 919 aa19.9■□□□□ 0.78
COL9A3-214ENST00000490398 PTPN14Q15678 1187 aa19.9■□□□□ 0.78
COL9A3-214ENST00000490398 ZNF568Q3ZCX4 644 aa19.9■□□□□ 0.78
COL9A3-214ENST00000490398 SEZ6Q53EL9 994 aa19.9■□□□□ 0.78
COL9A3-214ENST00000490398 GLRA4Q5JXX5 417 aa19.9■□□□□ 0.78
COL9A3-214ENST00000490398 RRAGBQ5VZM2 374 aa19.9■□□□□ 0.78
COL9A3-214ENST00000490398 DYMQ7RTS9 669 aa19.9■□□□□ 0.78
COL9A3-214ENST00000490398 HAUS6Q7Z4H7 955 aa19.9■□□□□ 0.78
COL9A3-214ENST00000490398 MYCT1Q8N699 235 aa19.9■□□□□ 0.78
COL9A3-214ENST00000490398 FEZF2Q8TBJ5 459 aa19.9■□□□□ 0.78
COL9A3-214ENST00000490398 B3GALT6Q96L58 329 aa19.9■□□□□ 0.78
COL9A3-214ENST00000490398 ZNF396Q96N95 335 aaPredicted RBP19.9■□□□□ 0.78
COL9A3-214ENST00000490398 ZHX3Q9H4I2 956 aa19.9■□□□□ 0.78
COL9A3-214ENST00000490398 CASTOR2A6NHX0 329 aa19.89■□□□□ 0.77
COL9A3-214ENST00000490398 LILRB3O75022 631 aa19.89■□□□□ 0.77
COL9A3-214ENST00000490398 FAM13AO94988 1023 aa19.89■□□□□ 0.77
COL9A3-214ENST00000490398 KRT18P05783 430 aaKnown RBP19.89■□□□□ 0.77
COL9A3-214ENST00000490398 NMT1P30419 496 aaKnown RBP19.89■□□□□ 0.77
COL9A3-214ENST00000490398 RNF168Q8IYW5 571 aaPredicted RBP19.89■□□□□ 0.77
COL9A3-214ENST00000490398 TMEM130Q8N3G9 435 aa19.89■□□□□ 0.77
COL9A3-214ENST00000490398 PDILTQ8N807 584 aa19.89■□□□□ 0.77
COL9A3-214ENST00000490398 KHSRPQ92945 711 aaKnown RBP eCLIP19.89■□□□□ 0.77
COL9A3-214ENST00000490398 RPS6KC1Q96S38 1066 aa19.89■□□□□ 0.77
COL9A3-214ENST00000490398 IKZF4Q9H2S9 585 aa19.89■□□□□ 0.77
COL9A3-214ENST00000490398 LARSQ9P2J5 1176 aaKnown RBP19.89■□□□□ 0.77
COL9A3-214ENST00000490398 CCDC39Q9UFE4 941 aa19.89■□□□□ 0.77
COL9A3-214ENST00000490398 CD207Q9UJ71 328 aa19.89■□□□□ 0.77
COL9A3-214ENST00000490398 CDH22Q9UJ99 828 aa19.89■□□□□ 0.77
COL9A3-214ENST00000490398 ZMYM2Q9UBW7 1377 aa19.88■□□□□ 0.77
COL9A3-214ENST00000490398 TNFRSF10AO00220 468 aa19.88■□□□□ 0.77
COL9A3-214ENST00000490398 PPP6R2O75170 966 aa19.88■□□□□ 0.77
COL9A3-214ENST00000490398 GRM5P41594 1212 aa19.88■□□□□ 0.77
COL9A3-214ENST00000490398 SMTNP53814 917 aa19.88■□□□□ 0.77
COL9A3-214ENST00000490398 DNM1Q05193 864 aaKnown RBP19.88■□□□□ 0.77
COL9A3-214ENST00000490398 AXDND1Q5T1B0 1012 aaPredicted RBP19.88■□□□□ 0.77
COL9A3-214ENST00000490398 SHC4Q6S5L8 630 aa19.88■□□□□ 0.77
COL9A3-214ENST00000490398 MPZL3Q6UWV2 235 aa19.88■□□□□ 0.77
COL9A3-214ENST00000490398 FAM178BQ8IXR5 827 aa19.88■□□□□ 0.77
COL9A3-214ENST00000490398 HASPINQ8TF76 798 aa19.88■□□□□ 0.77
COL9A3-214ENST00000490398 DNAJC19Q96DA6 116 aa19.88■□□□□ 0.77
COL9A3-214ENST00000490398 ZMAT2Q96NC0 199 aaKnown RBP19.88■□□□□ 0.77
COL9A3-214ENST00000490398 CDCA3Q99618 268 aaPredicted RBP19.88■□□□□ 0.77
COL9A3-214ENST00000490398 APOL5Q9BWW9 433 aa19.88■□□□□ 0.77
COL9A3-214ENST00000490398 GPR62Q9BZJ7 368 aa19.88■□□□□ 0.77
COL9A3-214ENST00000490398 PARVGQ9HBI0 331 aa19.88■□□□□ 0.77
COL9A3-214ENST00000490398 ANKFY1Q9P2R3 1169 aa19.88■□□□□ 0.77
COL9A3-214ENST00000490398 STK17AQ9UEE5 414 aa19.88■□□□□ 0.77
COL9A3-214ENST00000490398 HCFC2Q9Y5Z7 792 aa19.88■□□□□ 0.77
COL9A3-214ENST00000490398 MYH15Q9Y2K3 1946 aa19.87■□□□□ 0.77
COL9A3-214ENST00000490398 K7ENM7 598 aa19.87■□□□□ 0.77
COL9A3-214ENST00000490398 C2CD2LO14523 706 aa19.87■□□□□ 0.77
COL9A3-214ENST00000490398 TRAK2O60296 914 aa19.87■□□□□ 0.77
COL9A3-214ENST00000490398 YEATS4O95619 227 aa19.87■□□□□ 0.77
COL9A3-214ENST00000490398 BRD1O95696 1058 aa19.87■□□□□ 0.77
COL9A3-214ENST00000490398 SOD2P04179 222 aa19.87■□□□□ 0.77
COL9A3-214ENST00000490398 MCF2P10911 925 aa19.87■□□□□ 0.77
COL9A3-214ENST00000490398 EPCAMP16422 314 aa19.87■□□□□ 0.77
COL9A3-214ENST00000490398 STRN3Q13033 797 aa19.87■□□□□ 0.77
COL9A3-214ENST00000490398 TUSC3Q13454 348 aa19.87■□□□□ 0.77
COL9A3-214ENST00000490398 ZC2HC1CQ53FD0 456 aaPredicted RBP19.87■□□□□ 0.77
COL9A3-214ENST00000490398 KANK3Q6NY19 840 aa19.87■□□□□ 0.77
COL9A3-214ENST00000490398 SYCE2Q6PIF2 218 aa19.87■□□□□ 0.77
COL9A3-214ENST00000490398 ALKAL1Q6UXT8 129 aa19.87■□□□□ 0.77
COL9A3-214ENST00000490398 DDX12PQ92771 950 aa19.87■□□□□ 0.77
COL9A3-214ENST00000490398 STAMQ92783 540 aa19.87■□□□□ 0.77
COL9A3-214ENST00000490398 PPP1R10Q96QC0 940 aaKnown RBP19.87■□□□□ 0.77
COL9A3-214ENST00000490398 TCHPQ9BT92 498 aa19.87■□□□□ 0.77
COL9A3-214ENST00000490398 HERC2P3Q9BVR0 1158 aa19.87■□□□□ 0.77
COL9A3-214ENST00000490398 GOLGA2P5Q9HBQ8 144 aa19.87■□□□□ 0.77
COL9A3-214ENST00000490398 TBX20Q9UMR3 447 aa19.87■□□□□ 0.77
COL9A3-214ENST00000490398 IRAK3Q9Y616 596 aa19.87■□□□□ 0.77
COL9A3-214ENST00000490398 TBCAO75347 108 aaKnown RBP19.86■□□□□ 0.77
COL9A3-214ENST00000490398 KIF4AO95239 1232 aa19.86■□□□□ 0.77
COL9A3-214ENST00000490398 THP07101 528 aa19.86■□□□□ 0.77
COL9A3-214ENST00000490398 TXLNAP40222 546 aa19.86■□□□□ 0.77
COL9A3-214ENST00000490398 STAT6P42226 847 aa19.86■□□□□ 0.77
COL9A3-214ENST00000490398 SOX4Q06945 474 aaPredicted RBP19.86■□□□□ 0.77
COL9A3-214ENST00000490398 COASYQ13057 564 aa19.86■□□□□ 0.77
COL9A3-214ENST00000490398 SMAD4Q13485 552 aaKnown RBP19.86■□□□□ 0.77
COL9A3-214ENST00000490398 HSP90AA2PQ14568 343 aaPredicted RBP19.86■□□□□ 0.77
COL9A3-214ENST00000490398 SMAD2Q15796 467 aaKnown RBP19.86■□□□□ 0.77
COL9A3-214ENST00000490398 E2F4Q16254 413 aa19.86■□□□□ 0.77
COL9A3-214ENST00000490398 ZBTB41Q5SVQ8 909 aa19.86■□□□□ 0.77
COL9A3-214ENST00000490398 ANKRD54Q6NXT1 300 aa19.86■□□□□ 0.77
COL9A3-214ENST00000490398 SLC39A4Q6P5W5 647 aa19.86■□□□□ 0.77
COL9A3-214ENST00000490398 TMEM184AQ6ZMB5 413 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms