RNA–Protein interactions for RNA: ENST00000490101.1

SRM-206, Transcript of spermidine synthase, human

TSL 2

Gene SRM, Length 461 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRM-206	ENST00000490101	RC3H2	Q9HBD1	1191 aa	Known RBP	19.86	■□□□□ 0.77
SRM-206	ENST00000490101	CD320	Q9NPF0	282 aa		19.86	■□□□□ 0.77
SRM-206	ENST00000490101	CGN	Q9P2M7	1197 aa	Known RBP	19.86	■□□□□ 0.77
SRM-206	ENST00000490101	PADI3	Q9ULW8	664 aa		19.86	■□□□□ 0.77
SRM-206	ENST00000490101	EXOC7	Q9UPT5	735 aa		19.86	■□□□□ 0.77
SRM-206	ENST00000490101	GINS2	Q9Y248	185 aa		19.86	■□□□□ 0.77
SRM-206	ENST00000490101	TTC3	P53804	2025 aa		19.85	■□□□□ 0.77
SRM-206	ENST00000490101	PHLPP2	Q6ZVD8	1323 aa		19.85	■□□□□ 0.77
SRM-206	ENST00000490101	GRM6	O15303	877 aa		19.85	■□□□□ 0.77
SRM-206	ENST00000490101	TGFB1I1	O43294	461 aa		19.85	■□□□□ 0.77
SRM-206	ENST00000490101	CALU	O43852	315 aa	Predicted RBP	19.85	■□□□□ 0.77
SRM-206	ENST00000490101	FGFR1OP	O95684	399 aa	Known RBP	19.85	■□□□□ 0.77
SRM-206	ENST00000490101	LINC00271	P0C7V0	271 aa		19.85	■□□□□ 0.77
SRM-206	ENST00000490101	FKBP3	Q00688	224 aa	Known RBP	19.85	■□□□□ 0.77
SRM-206	ENST00000490101	CDCA2	Q69YH5	1023 aa	Predicted RBP	19.85	■□□□□ 0.77
SRM-206	ENST00000490101	HS2ST1	Q7LGA3	356 aa		19.85	■□□□□ 0.77
SRM-206	ENST00000490101	RTN4RL1	Q86UN2	441 aa	Predicted RBP	19.85	■□□□□ 0.77
SRM-206	ENST00000490101	IRF2BP1	Q8IU81	584 aa		19.85	■□□□□ 0.77
SRM-206	ENST00000490101	RHPN2	Q8IUC4	686 aa		19.85	■□□□□ 0.77
SRM-206	ENST00000490101	KSR1	Q8IVT5	923 aa		19.85	■□□□□ 0.77
SRM-206	ENST00000490101	MAP7D2	Q96T17	732 aa		19.85	■□□□□ 0.77
SRM-206	ENST00000490101	NFKBIZ	Q9BYH8	718 aa		19.85	■□□□□ 0.77
SRM-206	ENST00000490101	C2orf40	Q9H1Z8	148 aa		19.85	■□□□□ 0.77
SRM-206	ENST00000490101	CLDND1	Q9NY35	253 aa		19.85	■□□□□ 0.77
SRM-206	ENST00000490101	RWDD3	Q9Y3V2	267 aa		19.85	■□□□□ 0.77
SRM-206	ENST00000490101	C5orf67	F2Z3F1	127 aa		19.84	■□□□□ 0.77
SRM-206	ENST00000490101	DGKI	O75912	1065 aa		19.84	■□□□□ 0.77
SRM-206	ENST00000490101	RB1	P06400	928 aa		19.84	■□□□□ 0.77
SRM-206	ENST00000490101	SSTR3	P32745	418 aa	Predicted RBP	19.84	■□□□□ 0.77
SRM-206	ENST00000490101	CDC42EP1	Q00587	391 aa		19.84	■□□□□ 0.77
SRM-206	ENST00000490101	PAN2	Q504Q3	1202 aa	Known RBP	19.84	■□□□□ 0.77
SRM-206	ENST00000490101	LRRC55	Q6ZSA7	311 aa		19.84	■□□□□ 0.77
SRM-206	ENST00000490101	TAS1R3	Q7RTX0	852 aa		19.84	■□□□□ 0.77
SRM-206	ENST00000490101	IFNLR1	Q8IU57	520 aa	Predicted RBP	19.84	■□□□□ 0.77
SRM-206	ENST00000490101	SYCP3	Q8IZU3	236 aa		19.84	■□□□□ 0.77
SRM-206	ENST00000490101	RNF149	Q8NC42	400 aa		19.84	■□□□□ 0.77
SRM-206	ENST00000490101	TMEM174	Q8WUU8	243 aa		19.84	■□□□□ 0.77
SRM-206	ENST00000490101	ZNF689	Q96CS4	500 aa	Predicted RBP	19.84	■□□□□ 0.77
SRM-206	ENST00000490101	PABPC5	Q96DU9	382 aa	Known RBP	19.84	■□□□□ 0.77
SRM-206	ENST00000490101	CEP63	Q96MT8	703 aa		19.84	■□□□□ 0.77
SRM-206	ENST00000490101	FTHL17	Q9BXU8	183 aa		19.84	■□□□□ 0.77
SRM-206	ENST00000490101	SQOR	Q9Y6N5	450 aa		19.84	■□□□□ 0.77
SRM-206	ENST00000490101		K7ERI5	159 aa		19.83	■□□□□ 0.77
SRM-206	ENST00000490101	AP5Z1	O43299	807 aa		19.83	■□□□□ 0.77
SRM-206	ENST00000490101	SRGAP2C	P0DJJ0	459 aa		19.83	■□□□□ 0.77
SRM-206	ENST00000490101	ATP1A3	P13637	1013 aa		19.83	■□□□□ 0.77
SRM-206	ENST00000490101	PTEN	P60484	403 aa		19.83	■□□□□ 0.77
SRM-206	ENST00000490101	SPAG1	Q07617	926 aa		19.83	■□□□□ 0.77
SRM-206	ENST00000490101	MYBPC2	Q14324	1141 aa		19.83	■□□□□ 0.77
SRM-206	ENST00000490101	NPAS4	Q8IUM7	802 aa		19.83	■□□□□ 0.77
SRM-206	ENST00000490101	FAM114A1	Q8IWE2	563 aa		19.83	■□□□□ 0.77
SRM-206	ENST00000490101	ZBTB8OS	Q8IWT0	167 aa		19.83	■□□□□ 0.77
SRM-206	ENST00000490101	C12orf56	Q8IXR9	622 aa		19.83	■□□□□ 0.77
SRM-206	ENST00000490101	ZNF710	Q8N1W2	664 aa		19.83	■□□□□ 0.77
SRM-206	ENST00000490101	CLP1	Q92989	425 aa	Known RBP	19.83	■□□□□ 0.77
SRM-206	ENST00000490101	PPP1R16B	Q96T49	567 aa		19.83	■□□□□ 0.77
SRM-206	ENST00000490101	CCDC113	Q9H0I3	377 aa		19.83	■□□□□ 0.77
SRM-206	ENST00000490101	ALG13	Q9NP73	1137 aa	Known RBP	19.83	■□□□□ 0.77
SRM-206	ENST00000490101	AGPAT3	Q9NRZ7	376 aa		19.83	■□□□□ 0.77
SRM-206	ENST00000490101	AKT3	Q9Y243	479 aa		19.83	■□□□□ 0.77
SRM-206	ENST00000490101	MRPL42	Q9Y6G3	142 aa	Known RBP	19.83	■□□□□ 0.77
SRM-206	ENST00000490101	ATG2A	Q2TAZ0	1938 aa		19.82	■□□□□ 0.76
SRM-206	ENST00000490101	FAM86C2P	A6NEL3	165 aa		19.82	■□□□□ 0.76
SRM-206	ENST00000490101	GRXCR2	A6NFK2	248 aa		19.82	■□□□□ 0.76
SRM-206	ENST00000490101	PIGR	P01833	764 aa		19.82	■□□□□ 0.76
SRM-206	ENST00000490101	STAG3L1	P0CL83	205 aa		19.82	■□□□□ 0.76
SRM-206	ENST00000490101	CDK11B	P21127	795 aa	Known RBP	19.82	■□□□□ 0.76
SRM-206	ENST00000490101	RPL13	P26373	211 aa	Known RBP	19.82	■□□□□ 0.76
SRM-206	ENST00000490101	PHKA2	P46019	1235 aa		19.82	■□□□□ 0.76
SRM-206	ENST00000490101	NFX1	Q12986	1120 aa	Known RBP	19.82	■□□□□ 0.76
SRM-206	ENST00000490101	STRN3	Q13033	797 aa		19.82	■□□□□ 0.76
SRM-206	ENST00000490101	FILIP1	Q7Z7B0	1213 aa		19.82	■□□□□ 0.76
SRM-206	ENST00000490101	ZNF410	Q86VK4	478 aa		19.82	■□□□□ 0.76
SRM-206	ENST00000490101	SLC9A9	Q8IVB4	645 aa		19.82	■□□□□ 0.76
SRM-206	ENST00000490101	GJD3	Q8N144	294 aa		19.82	■□□□□ 0.76
SRM-206	ENST00000490101	NME8	Q8N427	588 aa		19.82	■□□□□ 0.76
SRM-206	ENST00000490101	LMAN2L	Q9H0V9	348 aa		19.82	■□□□□ 0.76
SRM-206	ENST00000490101	IKZF4	Q9H2S9	585 aa		19.82	■□□□□ 0.76
SRM-206	ENST00000490101	DMAC2	Q9NW81	257 aa		19.82	■□□□□ 0.76
SRM-206	ENST00000490101	LIMA1	Q9UHB6	759 aa	Known RBP	19.82	■□□□□ 0.76
SRM-206	ENST00000490101	LRFN2	Q9ULH4	789 aa		19.82	■□□□□ 0.76
SRM-206	ENST00000490101	LRRC10B	A6NIK2	292 aa		19.81	■□□□□ 0.76
SRM-206	ENST00000490101	CETN3	O15182	167 aa		19.81	■□□□□ 0.76
SRM-206	ENST00000490101	VTN	P04004	478 aa		19.81	■□□□□ 0.76
SRM-206	ENST00000490101	NR3C1	P04150	777 aa		19.81	■□□□□ 0.76
SRM-206	ENST00000490101	EEF1G	P26641	437 aa	Known RBP	19.81	■□□□□ 0.76
SRM-206	ENST00000490101	GATM	P50440	423 aa		19.81	■□□□□ 0.76
SRM-206	ENST00000490101	GPC3	P51654	580 aa		19.81	■□□□□ 0.76
SRM-206	ENST00000490101	FANCC	Q00597	558 aa		19.81	■□□□□ 0.76
SRM-206	ENST00000490101	ADAM9	Q13443	819 aa		19.81	■□□□□ 0.76
SRM-206	ENST00000490101	CLUL1	Q15846	466 aa		19.81	■□□□□ 0.76
SRM-206	ENST00000490101	TCP11X2	Q5H9J9	407 aa		19.81	■□□□□ 0.76
SRM-206	ENST00000490101	TMEM31	Q5JXX7	168 aa		19.81	■□□□□ 0.76
SRM-206	ENST00000490101	CMTR2	Q8IYT2	770 aa	Known RBP	19.81	■□□□□ 0.76
SRM-206	ENST00000490101	NLRP4	Q96MN2	994 aa		19.81	■□□□□ 0.76
SRM-206	ENST00000490101	LRFN3	Q9BTN0	628 aa		19.81	■□□□□ 0.76
SRM-206	ENST00000490101	TMX1	Q9H3N1	280 aa		19.81	■□□□□ 0.76
SRM-206	ENST00000490101	IGFLR1	Q9H665	355 aa		19.81	■□□□□ 0.76
SRM-206	ENST00000490101	CDHR5	Q9HBB8	845 aa		19.81	■□□□□ 0.76
SRM-206	ENST00000490101	IFT122	Q9HBG6	1241 aa		19.81	■□□□□ 0.76

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