RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 EEF1DP3Q658K8 133 aa10.73□□□□□ -0.69
TMEM39A-210ENST00000490099 ARL6IP4Q66PJ3 421 aaKnown RBP10.73□□□□□ -0.69
TMEM39A-210ENST00000490099 KIAA1841Q6NSI8 718 aa10.73□□□□□ -0.69
TMEM39A-210ENST00000490099 CES5AQ6NT32 575 aa10.73□□□□□ -0.69
TMEM39A-210ENST00000490099 RINT1Q6NUQ1 792 aa10.73□□□□□ -0.69
TMEM39A-210ENST00000490099 LILRA6Q6PI73 481 aa10.73□□□□□ -0.69
TMEM39A-210ENST00000490099 DTHD1Q6ZMT9 781 aa10.73□□□□□ -0.69
TMEM39A-210ENST00000490099 TRIM67Q6ZTA4 783 aa10.73□□□□□ -0.69
TMEM39A-210ENST00000490099 KCNK18Q7Z418 384 aa10.73□□□□□ -0.69
TMEM39A-210ENST00000490099 GPR149Q86SP6 731 aa10.73□□□□□ -0.69
TMEM39A-210ENST00000490099 CMASQ8NFW8 434 aaPredicted RBP10.73□□□□□ -0.69
TMEM39A-210ENST00000490099 SNX29Q8TEQ0 813 aa10.73□□□□□ -0.69
TMEM39A-210ENST00000490099 RPGRIP1Q96KN7 1286 aa10.73□□□□□ -0.69
TMEM39A-210ENST00000490099 FBXL18Q96ME1 805 aa10.73□□□□□ -0.69
TMEM39A-210ENST00000490099 EMILIN2Q9BXX0 1053 aa10.73□□□□□ -0.69
TMEM39A-210ENST00000490099 GPR62Q9BZJ7 368 aa10.73□□□□□ -0.69
TMEM39A-210ENST00000490099 TRIM6Q9C030 488 aaPredicted RBP10.73□□□□□ -0.69
TMEM39A-210ENST00000490099 POMKQ9H5K3 350 aa10.73□□□□□ -0.69
TMEM39A-210ENST00000490099 TMEM134Q9H6X4 195 aa10.73□□□□□ -0.69
TMEM39A-210ENST00000490099 MRPL17Q9NRX2 175 aaKnown RBP10.73□□□□□ -0.69
TMEM39A-210ENST00000490099 ARHGAP28Q9P2N2 729 aa10.73□□□□□ -0.69
TMEM39A-210ENST00000490099 CDH22Q9UJ99 828 aa10.73□□□□□ -0.69
TMEM39A-210ENST00000490099 DNM3Q9UQ16 869 aa10.73□□□□□ -0.69
TMEM39A-210ENST00000490099 USTQ9Y2C2 406 aa10.73□□□□□ -0.69
TMEM39A-210ENST00000490099 SSX2IPQ9Y2D8 614 aa10.73□□□□□ -0.69
TMEM39A-210ENST00000490099 MYO10Q9HD67 2058 aa10.73□□□□□ -0.69
TMEM39A-210ENST00000490099 E9PMD0 336 aa10.72□□□□□ -0.69
TMEM39A-210ENST00000490099 ABLIM1O14639 778 aa10.72□□□□□ -0.69
TMEM39A-210ENST00000490099 SLC26A4O43511 780 aa10.72□□□□□ -0.69
TMEM39A-210ENST00000490099 NR1I2O75469 434 aa10.72□□□□□ -0.69
TMEM39A-210ENST00000490099 BRD1O95696 1058 aa10.72□□□□□ -0.69
TMEM39A-210ENST00000490099 PRKCBP05771 671 aa10.72□□□□□ -0.69
TMEM39A-210ENST00000490099 PROZP22891 400 aa10.72□□□□□ -0.69
TMEM39A-210ENST00000490099 GUCY2CP25092 1073 aa10.72□□□□□ -0.69
TMEM39A-210ENST00000490099 CDC25AP30304 524 aa10.72□□□□□ -0.69
TMEM39A-210ENST00000490099 OR1G1P47890 313 aa10.72□□□□□ -0.69
TMEM39A-210ENST00000490099 GLUD2P49448 558 aa10.72□□□□□ -0.69
TMEM39A-210ENST00000490099 TUSC3Q13454 348 aa10.72□□□□□ -0.69
TMEM39A-210ENST00000490099 ATAT1Q5SQI0 421 aa10.72□□□□□ -0.69
TMEM39A-210ENST00000490099 KANK3Q6NY19 840 aa10.72□□□□□ -0.69
TMEM39A-210ENST00000490099 ALKAL1Q6UXT8 129 aa10.72□□□□□ -0.69
TMEM39A-210ENST00000490099 CYP26C1Q6V0L0 522 aa10.72□□□□□ -0.69
TMEM39A-210ENST00000490099 C15orf39Q6ZRI6 1047 aa10.72□□□□□ -0.69
TMEM39A-210ENST00000490099 HFE2Q6ZVN8 426 aa10.72□□□□□ -0.69
TMEM39A-210ENST00000490099 TAS1R3Q7RTX0 852 aa10.72□□□□□ -0.69
TMEM39A-210ENST00000490099 ZDHHC14Q8IZN3 488 aa10.72□□□□□ -0.69
TMEM39A-210ENST00000490099 C12orf76Q8N812 135 aaPredicted RBP10.72□□□□□ -0.69
TMEM39A-210ENST00000490099 DEPTORQ8TB45 409 aa10.72□□□□□ -0.69
TMEM39A-210ENST00000490099 FEZF2Q8TBJ5 459 aa10.72□□□□□ -0.69
TMEM39A-210ENST00000490099 HDAC7Q8WUI4 952 aa10.72□□□□□ -0.69
TMEM39A-210ENST00000490099 SPIRE2Q8WWL2 714 aa10.72□□□□□ -0.69
TMEM39A-210ENST00000490099 IFT74Q96LB3 600 aa10.72□□□□□ -0.69
TMEM39A-210ENST00000490099 RIPOR3Q96MK2 946 aa10.72□□□□□ -0.69
TMEM39A-210ENST00000490099 PNMA5Q96PV4 448 aa10.72□□□□□ -0.69
TMEM39A-210ENST00000490099 RUSC1Q9BVN2 902 aa10.72□□□□□ -0.69
TMEM39A-210ENST00000490099 TIPINQ9BVW5 301 aa10.72□□□□□ -0.69
TMEM39A-210ENST00000490099 KCNH6Q9H252 994 aa10.72□□□□□ -0.69
TMEM39A-210ENST00000490099 CXCL16Q9H2A7 254 aa10.72□□□□□ -0.69
TMEM39A-210ENST00000490099 POLD4Q9HCU8 107 aa10.72□□□□□ -0.69
TMEM39A-210ENST00000490099 RYDENQ9NUL5 291 aaKnown RBP10.72□□□□□ -0.69
TMEM39A-210ENST00000490099 KLK14Q9P0G3 267 aa10.72□□□□□ -0.69
TMEM39A-210ENST00000490099 FNIP2Q9P278 1114 aa10.72□□□□□ -0.69
TMEM39A-210ENST00000490099 TNFSF13BQ9Y275 285 aa10.72□□□□□ -0.69
TMEM39A-210ENST00000490099 USP20Q9Y2K6 914 aa10.72□□□□□ -0.69
TMEM39A-210ENST00000490099 PRG3Q9Y2Y8 225 aaPredicted RBP10.72□□□□□ -0.69
TMEM39A-210ENST00000490099 RBM19Q9Y4C8 960 aaKnown RBP10.72□□□□□ -0.69
TMEM39A-210ENST00000490099 K7ERI5 159 aa10.71□□□□□ -0.69
TMEM39A-210ENST00000490099 RECQL4O94761 1208 aa10.71□□□□□ -0.69
TMEM39A-210ENST00000490099 KLRC2P26717 231 aa10.71□□□□□ -0.69
TMEM39A-210ENST00000490099 SLC12A3P55017 1021 aa10.71□□□□□ -0.69
TMEM39A-210ENST00000490099 PTPN21Q16825 1174 aa10.71□□□□□ -0.69
TMEM39A-210ENST00000490099 DCAF4L1Q3SXM0 396 aa10.71□□□□□ -0.69
TMEM39A-210ENST00000490099 TMEM119Q4V9L6 283 aa10.71□□□□□ -0.69
TMEM39A-210ENST00000490099 RARS2Q5T160 578 aaKnown RBP10.71□□□□□ -0.69
TMEM39A-210ENST00000490099 ATF7IP2Q5U623 682 aa10.71□□□□□ -0.69
TMEM39A-210ENST00000490099 FUT10Q6P4F1 479 aa10.71□□□□□ -0.69
TMEM39A-210ENST00000490099 CD300LGQ6UXG3 332 aa10.71□□□□□ -0.69
TMEM39A-210ENST00000490099 CABP7Q86V35 215 aa10.71□□□□□ -0.69
TMEM39A-210ENST00000490099 SYT2Q8N9I0 419 aaPredicted RBP10.71□□□□□ -0.69
TMEM39A-210ENST00000490099 SPRYD3Q8NCJ5 442 aa10.71□□□□□ -0.69
TMEM39A-210ENST00000490099 ASIC4Q96FT7 647 aa10.71□□□□□ -0.69
TMEM39A-210ENST00000490099 AK8Q96MA6 479 aa10.71□□□□□ -0.69
TMEM39A-210ENST00000490099 ACO2Q99798 780 aaKnown RBP10.71□□□□□ -0.69
TMEM39A-210ENST00000490099 PAAF1Q9BRP4 392 aa10.71□□□□□ -0.69
TMEM39A-210ENST00000490099 KIFC3Q9BVG8 833 aa10.71□□□□□ -0.69
TMEM39A-210ENST00000490099 APOL6Q9BWW8 343 aa10.71□□□□□ -0.69
TMEM39A-210ENST00000490099 APOL5Q9BWW9 433 aa10.71□□□□□ -0.69
TMEM39A-210ENST00000490099 SFXN1Q9H9B4 322 aa10.71□□□□□ -0.69
TMEM39A-210ENST00000490099 UPF2Q9HAU5 1272 aaKnown RBP10.71□□□□□ -0.69
TMEM39A-210ENST00000490099 SNTG2Q9NY99 539 aa10.71□□□□□ -0.69
TMEM39A-210ENST00000490099 KCND2Q9NZV8 630 aa10.71□□□□□ -0.69
TMEM39A-210ENST00000490099 KCNG1Q9UIX4 513 aa10.71□□□□□ -0.69
TMEM39A-210ENST00000490099 ADAM28Q9UKQ2 775 aa10.71□□□□□ -0.69
TMEM39A-210ENST00000490099 HCN4Q9Y3Q4 1203 aa10.71□□□□□ -0.69
TMEM39A-210ENST00000490099 NR2E1Q9Y466 385 aa10.71□□□□□ -0.69
TMEM39A-210ENST00000490099 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.71□□□□□ -0.69
TMEM39A-210ENST00000490099 CACNA1HO95180 2353 aa10.7□□□□□ -0.7
TMEM39A-210ENST00000490099 PHLPP2Q6ZVD8 1323 aa10.7□□□□□ -0.7
TMEM39A-210ENST00000490099 C2CD4DB7Z1M9 353 aa10.7□□□□□ -0.7
TMEM39A-210ENST00000490099 TMEM189-UBE2V1I3L0A0 370 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms