RNA–Protein interactions for RNA: ENST00000490056.5

SFXN5-220, Transcript of sideroflexin 5, humanhuman

TSL 1 (best)

Gene SFXN5, Length 906 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-220ENST00000490056 HOXA2O43364 376 aa18.26■□□□□ 0.51
SFXN5-220ENST00000490056 ARHGEF15O94989 841 aa18.26■□□□□ 0.51
SFXN5-220ENST00000490056 KIF20AO95235 890 aa18.26■□□□□ 0.51
SFXN5-220ENST00000490056 MLH1P40692 756 aa18.26■□□□□ 0.51
SFXN5-220ENST00000490056 ACOT2P49753 483 aa18.26■□□□□ 0.51
SFXN5-220ENST00000490056 KLHL40Q2TBA0 621 aa18.26■□□□□ 0.51
SFXN5-220ENST00000490056 COBLL1Q53SF7 1204 aa18.26■□□□□ 0.51
SFXN5-220ENST00000490056 GLB1LQ6UWU2 654 aa18.26■□□□□ 0.51
SFXN5-220ENST00000490056 ABI1Q8IZP0 508 aa18.26■□□□□ 0.51
SFXN5-220ENST00000490056 ADSSL1Q8N142 457 aa18.26■□□□□ 0.51
SFXN5-220ENST00000490056 NOC3LQ8WTT2 800 aaKnown RBP18.26■□□□□ 0.51
SFXN5-220ENST00000490056 ACAP3Q96P50 834 aa18.26■□□□□ 0.51
SFXN5-220ENST00000490056 GTPBP4Q9BZE4 634 aaKnown RBP18.26■□□□□ 0.51
SFXN5-220ENST00000490056 NKX2-4Q9H2Z4 354 aa18.26■□□□□ 0.51
SFXN5-220ENST00000490056 SEMA6BQ9H3T3 888 aa18.26■□□□□ 0.51
SFXN5-220ENST00000490056 TYW1Q9NV66 732 aaKnown RBP18.26■□□□□ 0.51
SFXN5-220ENST00000490056 MIOSQ9NXC5 875 aa18.26■□□□□ 0.51
SFXN5-220ENST00000490056 MSRAQ9UJ68 235 aa18.26■□□□□ 0.51
SFXN5-220ENST00000490056 GIT1Q9Y2X7 761 aa18.26■□□□□ 0.51
SFXN5-220ENST00000490056 ARL5CA6NH57 179 aa18.25■□□□□ 0.51
SFXN5-220ENST00000490056 PPP1R3GB7ZBB8 358 aa18.25■□□□□ 0.51
SFXN5-220ENST00000490056 SOX1O00570 391 aaPredicted RBP18.25■□□□□ 0.51
SFXN5-220ENST00000490056 PDXKO00764 312 aa18.25■□□□□ 0.51
SFXN5-220ENST00000490056 CA3P07451 260 aa18.25■□□□□ 0.51
SFXN5-220ENST00000490056 CLTAP09496 248 aa18.25■□□□□ 0.51
SFXN5-220ENST00000490056 CYP2J2P51589 502 aa18.25■□□□□ 0.51
SFXN5-220ENST00000490056 SMAD3P84022 425 aaKnown RBP18.25■□□□□ 0.51
SFXN5-220ENST00000490056 BTG3Q14201 252 aaPredicted RBP18.25■□□□□ 0.51
SFXN5-220ENST00000490056 NOMO2Q5JPE7 1267 aa18.25■□□□□ 0.51
SFXN5-220ENST00000490056 KLHL10Q6JEL2 608 aa18.25■□□□□ 0.51
SFXN5-220ENST00000490056 CRELD2Q6UXH1 353 aaPredicted RBP18.25■□□□□ 0.51
SFXN5-220ENST00000490056 LRRC55Q6ZSA7 311 aa18.25■□□□□ 0.51
SFXN5-220ENST00000490056 RBM43Q6ZSC3 357 aaKnown RBP18.25■□□□□ 0.51
SFXN5-220ENST00000490056 HS2ST1Q7LGA3 356 aa18.25■□□□□ 0.51
SFXN5-220ENST00000490056 TRIML1Q8N9V2 468 aa18.25■□□□□ 0.51
SFXN5-220ENST00000490056 FAM213AQ9BRX8 229 aa18.25■□□□□ 0.51
SFXN5-220ENST00000490056 UBN1Q9NPG3 1134 aa18.25■□□□□ 0.51
SFXN5-220ENST00000490056 HSPBP1Q9NZL4 362 aa18.25■□□□□ 0.51
SFXN5-220ENST00000490056 CPSF3Q9UKF6 684 aaKnown RBP18.25■□□□□ 0.51
SFXN5-220ENST00000490056 TRIP11Q15643 1979 aa18.24■□□□□ 0.51
SFXN5-220ENST00000490056 POMCP01189 267 aa18.24■□□□□ 0.51
SFXN5-220ENST00000490056 CXCL8P10145 99 aa18.24■□□□□ 0.51
SFXN5-220ENST00000490056 DNAJB2P25686 324 aa18.24■□□□□ 0.51
SFXN5-220ENST00000490056 SCNN1GP51170 649 aa18.24■□□□□ 0.51
SFXN5-220ENST00000490056 YARSP54577 528 aaKnown RBP18.24■□□□□ 0.51
SFXN5-220ENST00000490056 ENOX2Q16206 610 aaKnown RBP18.24■□□□□ 0.51
SFXN5-220ENST00000490056 SLC10A6Q3KNW5 377 aa18.24■□□□□ 0.51
SFXN5-220ENST00000490056 SPRED2Q7Z698 418 aa18.24■□□□□ 0.51
SFXN5-220ENST00000490056 CMTR2Q8IYT2 770 aaKnown RBP18.24■□□□□ 0.51
SFXN5-220ENST00000490056 GSTCDQ8NEC7 633 aa18.24■□□□□ 0.51
SFXN5-220ENST00000490056 SP7Q8TDD2 431 aaPredicted RBP18.24■□□□□ 0.51
SFXN5-220ENST00000490056 PLAGL2Q9UPG8 496 aa18.24■□□□□ 0.51
SFXN5-220ENST00000490056 MRPL42Q9Y6G3 142 aaKnown RBP18.24■□□□□ 0.51
SFXN5-220ENST00000490056 LINC01553A4QN01 128 aa18.23■□□□□ 0.51
SFXN5-220ENST00000490056 TULP1O00294 542 aaPredicted RBP18.23■□□□□ 0.51
SFXN5-220ENST00000490056 PTGESO14684 152 aa18.23■□□□□ 0.51
SFXN5-220ENST00000490056 CALUO43852 315 aaPredicted RBP18.23■□□□□ 0.51
SFXN5-220ENST00000490056 EXTL3O43909 919 aa18.23■□□□□ 0.51
SFXN5-220ENST00000490056 PMS1P54277 932 aaKnown RBP18.23■□□□□ 0.51
SFXN5-220ENST00000490056 SNRPFP62306 86 aaKnown RBP18.23■□□□□ 0.51
SFXN5-220ENST00000490056 STIM1Q13586 685 aa18.23■□□□□ 0.51
SFXN5-220ENST00000490056 RAB30Q15771 203 aa18.23■□□□□ 0.51
SFXN5-220ENST00000490056 ZCWPW2Q504Y3 356 aa18.23■□□□□ 0.51
SFXN5-220ENST00000490056 HABP4Q5JVS0 413 aaKnown RBP18.23■□□□□ 0.51
SFXN5-220ENST00000490056 CENPPQ6IPU0 288 aa18.23■□□□□ 0.51
SFXN5-220ENST00000490056 ALKAL1Q6UXT8 129 aa18.23■□□□□ 0.51
SFXN5-220ENST00000490056 FIBCD1Q8N539 461 aa18.23■□□□□ 0.51
SFXN5-220ENST00000490056 RDH13Q8NBN7 331 aa18.23■□□□□ 0.51
SFXN5-220ENST00000490056 GOLGA5Q8TBA6 731 aa18.23■□□□□ 0.51
SFXN5-220ENST00000490056 URGCPQ8TCY9 931 aa18.23■□□□□ 0.51
SFXN5-220ENST00000490056 FAM212AQ96EL1 285 aa18.23■□□□□ 0.51
SFXN5-220ENST00000490056 SNX27Q96L92 541 aa18.23■□□□□ 0.51
SFXN5-220ENST00000490056 RPF1Q9H9Y2 349 aaKnown RBP18.23■□□□□ 0.51
SFXN5-220ENST00000490056 TBC1D13Q9NVG8 400 aa18.23■□□□□ 0.51
SFXN5-220ENST00000490056 CGNQ9P2M7 1197 aaKnown RBP18.23■□□□□ 0.51
SFXN5-220ENST00000490056 TRAF3IP3Q9Y228 551 aa18.23■□□□□ 0.51
SFXN5-220ENST00000490056 CITO14578 2027 aa18.22■□□□□ 0.51
SFXN5-220ENST00000490056 TRIM49BA6NDI0 452 aa18.22■□□□□ 0.51
SFXN5-220ENST00000490056 LACTBL1A8MY62 500 aa18.22■□□□□ 0.51
SFXN5-220ENST00000490056 INPPL1O15357 1258 aa18.22■□□□□ 0.51
SFXN5-220ENST00000490056 B4GALT3O60512 393 aa18.22■□□□□ 0.51
SFXN5-220ENST00000490056 LDHAP00338 332 aaKnown RBP18.22■□□□□ 0.51
SFXN5-220ENST00000490056 NR3C1P04150 777 aa18.22■□□□□ 0.51
SFXN5-220ENST00000490056 NLRP12P59046 1061 aa18.22■□□□□ 0.51
SFXN5-220ENST00000490056 SPAG1Q07617 926 aa18.22■□□□□ 0.51
SFXN5-220ENST00000490056 KYAT1Q16773 422 aa18.22■□□□□ 0.51
SFXN5-220ENST00000490056 SKOR2Q2VWA4 1001 aaPredicted RBP18.22■□□□□ 0.51
SFXN5-220ENST00000490056 GLRA4Q5JXX5 417 aa18.22■□□□□ 0.51
SFXN5-220ENST00000490056 ANKRD40Q6AI12 368 aa18.22■□□□□ 0.51
SFXN5-220ENST00000490056 ZNF280BQ86YH2 543 aa18.22■□□□□ 0.51
SFXN5-220ENST00000490056 CBWD2Q8IUF1 395 aa18.22■□□□□ 0.51
SFXN5-220ENST00000490056 C12orf56Q8IXR9 622 aa18.22■□□□□ 0.51
SFXN5-220ENST00000490056 GPD1LQ8N335 351 aa18.22■□□□□ 0.51
SFXN5-220ENST00000490056 XXYLT1Q8NBI6 393 aa18.22■□□□□ 0.51
SFXN5-220ENST00000490056 NELFBQ8WX92 580 aa18.22■□□□□ 0.51
SFXN5-220ENST00000490056 P2RX5Q93086 422 aa18.22■□□□□ 0.51
SFXN5-220ENST00000490056 SYAP1Q96A49 352 aaPredicted RBP18.22■□□□□ 0.51
SFXN5-220ENST00000490056 DHTKD1Q96HY7 919 aaPredicted RBP18.22■□□□□ 0.51
SFXN5-220ENST00000490056 LRCH3Q96II8 777 aa18.22■□□□□ 0.51
SFXN5-220ENST00000490056 RPS6KC1Q96S38 1066 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms