RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 ZNF572Q7Z3I7 529 aaPredicted RBP5.34□□□□□ -1.55
HMGN1-218ENST00000490032 OR7D4Q8NG98 312 aa5.34□□□□□ -1.55
HMGN1-218ENST00000490032 RIN2Q8WYP3 895 aaPredicted RBP5.34□□□□□ -1.55
HMGN1-218ENST00000490032 FATE1Q969F0 183 aa5.34□□□□□ -1.55
HMGN1-218ENST00000490032 BCO1Q9HAY6 547 aa5.34□□□□□ -1.55
HMGN1-218ENST00000490032 IFT122Q9HBG6 1241 aa5.34□□□□□ -1.55
HMGN1-218ENST00000490032 ATRNL1Q5VV63 1379 aa5.33□□□□□ -1.56
HMGN1-218ENST00000490032 ADCY6O43306 1168 aa5.33□□□□□ -1.56
HMGN1-218ENST00000490032 GCP02774 474 aa5.33□□□□□ -1.56
HMGN1-218ENST00000490032 CPEP16870 476 aa5.33□□□□□ -1.56
HMGN1-218ENST00000490032 CANXP27824 592 aaKnown RBP5.33□□□□□ -1.56
HMGN1-218ENST00000490032 BMPR1AP36894 532 aa5.33□□□□□ -1.56
HMGN1-218ENST00000490032 BEAN1Q3B7T3 259 aa5.33□□□□□ -1.56
HMGN1-218ENST00000490032 EFCAB12Q6NXP0 572 aa5.33□□□□□ -1.56
HMGN1-218ENST00000490032 Q6ZVL8 140 aa5.33□□□□□ -1.56
HMGN1-218ENST00000490032 PLXDC1Q8IUK5 500 aa5.33□□□□□ -1.56
HMGN1-218ENST00000490032 VRK3Q8IV63 474 aa5.33□□□□□ -1.56
HMGN1-218ENST00000490032 TRMT2AQ8IZ69 625 aaKnown RBP5.33□□□□□ -1.56
HMGN1-218ENST00000490032 TGFBRAP1Q8WUH2 860 aa5.33□□□□□ -1.56
HMGN1-218ENST00000490032 TFAP2CQ92754 450 aa5.33□□□□□ -1.56
HMGN1-218ENST00000490032 HOXB13Q92826 284 aaPredicted RBP5.33□□□□□ -1.56
HMGN1-218ENST00000490032 QRSL1Q9H0R6 528 aaKnown RBP5.33□□□□□ -1.56
HMGN1-218ENST00000490032 AKIP1Q9NQ31 210 aa5.33□□□□□ -1.56
HMGN1-218ENST00000490032 GPR39O43194 453 aa5.32□□□□□ -1.56
HMGN1-218ENST00000490032 AKR1B10O60218 316 aa5.32□□□□□ -1.56
HMGN1-218ENST00000490032 NCR1O76036 304 aa5.32□□□□□ -1.56
HMGN1-218ENST00000490032 ALOX15P16050 662 aaPredicted RBP5.32□□□□□ -1.56
HMGN1-218ENST00000490032 RNASE9P60153 205 aaKnown RBP5.32□□□□□ -1.56
HMGN1-218ENST00000490032 CT47A1Q5JQC4 288 aaPredicted RBP5.32□□□□□ -1.56
HMGN1-218ENST00000490032 FAM102AQ5T9C2 384 aaPredicted RBP5.32□□□□□ -1.56
HMGN1-218ENST00000490032 LHFPL2Q6ZUX7 228 aa5.32□□□□□ -1.56
HMGN1-218ENST00000490032 ARHGEF19Q8IW93 802 aa5.32□□□□□ -1.56
HMGN1-218ENST00000490032 REPS2Q8NFH8 660 aa5.32□□□□□ -1.56
HMGN1-218ENST00000490032 ZFP28Q8NHY6 868 aa5.32□□□□□ -1.56
HMGN1-218ENST00000490032 SLC35B2Q8TB61 432 aa5.32□□□□□ -1.56
HMGN1-218ENST00000490032 GREM2Q9H772 168 aa5.32□□□□□ -1.56
HMGN1-218ENST00000490032 PACSIN3Q9UKS6 424 aa5.32□□□□□ -1.56
HMGN1-218ENST00000490032 MARCH11A6NNE9 402 aa5.31□□□□□ -1.56
HMGN1-218ENST00000490032 CXorf49A8MYA2 514 aaPredicted RBP5.31□□□□□ -1.56
HMGN1-218ENST00000490032 K7ESF4 209 aa5.31□□□□□ -1.56
HMGN1-218ENST00000490032 ZNF185O15231 689 aa5.31□□□□□ -1.56
HMGN1-218ENST00000490032 B3GALT2O43825 422 aa5.31□□□□□ -1.56
HMGN1-218ENST00000490032 LPXNO60711 386 aa5.31□□□□□ -1.56
HMGN1-218ENST00000490032 PRKD3O94806 890 aa5.31□□□□□ -1.56
HMGN1-218ENST00000490032 RHOBTB3O94955 611 aa5.31□□□□□ -1.56
HMGN1-218ENST00000490032 CLSTN1O94985 981 aa5.31□□□□□ -1.56
HMGN1-218ENST00000490032 ECHS1P30084 290 aa5.31□□□□□ -1.56
HMGN1-218ENST00000490032 ADSLP30566 484 aaPredicted RBP5.31□□□□□ -1.56
HMGN1-218ENST00000490032 GPR3P46089 330 aa5.31□□□□□ -1.56
HMGN1-218ENST00000490032 SCAND1P57086 179 aa5.31□□□□□ -1.56
HMGN1-218ENST00000490032 CLRN1P58418 232 aa5.31□□□□□ -1.56
HMGN1-218ENST00000490032 CCT2P78371 535 aaKnown RBP5.31□□□□□ -1.56
HMGN1-218ENST00000490032 TMPRSS15P98073 1019 aa5.31□□□□□ -1.56
HMGN1-218ENST00000490032 TAP1Q03518 808 aa5.31□□□□□ -1.56
HMGN1-218ENST00000490032 PPP3CAQ08209 521 aa5.31□□□□□ -1.56
HMGN1-218ENST00000490032 SP140Q13342 867 aa5.31□□□□□ -1.56
HMGN1-218ENST00000490032 PDCD4Q53EL6 469 aaKnown RBP5.31□□□□□ -1.56
HMGN1-218ENST00000490032 MUM1L1Q5H9M0 696 aa5.31□□□□□ -1.56
HMGN1-218ENST00000490032 TOR2AQ5JU69 321 aa5.31□□□□□ -1.56
HMGN1-218ENST00000490032 FAM180AQ6UWF9 173 aa5.31□□□□□ -1.56
HMGN1-218ENST00000490032 RNF169Q8NCN4 708 aa5.31□□□□□ -1.56
HMGN1-218ENST00000490032 AHCYL2Q96HN2 611 aaKnown RBP5.31□□□□□ -1.56
HMGN1-218ENST00000490032 NEU1Q99519 415 aa5.31□□□□□ -1.56
HMGN1-218ENST00000490032 TEX101Q9BY14 249 aa5.31□□□□□ -1.56
HMGN1-218ENST00000490032 ACE2Q9BYF1 805 aaPredicted RBP5.31□□□□□ -1.56
HMGN1-218ENST00000490032 TMX1Q9H3N1 280 aa5.31□□□□□ -1.56
HMGN1-218ENST00000490032 RBM12Q9NTZ6 932 aaKnown RBP5.31□□□□□ -1.56
HMGN1-218ENST00000490032 C14orf119Q9NWQ9 140 aa5.31□□□□□ -1.56
HMGN1-218ENST00000490032 POGKQ9P215 609 aa5.31□□□□□ -1.56
HMGN1-218ENST00000490032 WNT10BO00744 389 aa5.3□□□□□ -1.56
HMGN1-218ENST00000490032 SNRPA1P09661 255 aaKnown RBP5.3□□□□□ -1.56
HMGN1-218ENST00000490032 SPATA31D3P0C874 917 aa5.3□□□□□ -1.56
HMGN1-218ENST00000490032 POU3F3P20264 500 aaPredicted RBP5.3□□□□□ -1.56
HMGN1-218ENST00000490032 PTPN7P35236 360 aa5.3□□□□□ -1.56
HMGN1-218ENST00000490032 ADRA1BP35368 520 aa5.3□□□□□ -1.56
HMGN1-218ENST00000490032 SREBF1P36956 1147 aa5.3□□□□□ -1.56
HMGN1-218ENST00000490032 ZEB1P37275 1124 aaPredicted RBP5.3□□□□□ -1.56
HMGN1-218ENST00000490032 MTNR1BP49286 362 aa5.3□□□□□ -1.56
HMGN1-218ENST00000490032 SRSF2Q01130 221 aaKnown RBP5.3□□□□□ -1.56
HMGN1-218ENST00000490032 FSTL1Q12841 308 aa5.3□□□□□ -1.56
HMGN1-218ENST00000490032 MALLQ13021 153 aa5.3□□□□□ -1.56
HMGN1-218ENST00000490032 SPATA31D4Q6ZUB0 917 aa5.3□□□□□ -1.56
HMGN1-218ENST00000490032 SPATS2Q86XZ4 545 aaKnown RBP5.3□□□□□ -1.56
HMGN1-218ENST00000490032 WDR66Q8TBY9 1149 aa5.3□□□□□ -1.56
HMGN1-218ENST00000490032 TOR3AQ9H497 397 aa5.3□□□□□ -1.56
HMGN1-218ENST00000490032 SERHL2Q9H4I8 314 aa5.3□□□□□ -1.56
HMGN1-218ENST00000490032 CCM2LQ9NUG4 571 aaPredicted RBP5.3□□□□□ -1.56
HMGN1-218ENST00000490032 PRKAB1Q9Y478 270 aa5.3□□□□□ -1.56
HMGN1-218ENST00000490032 POLR2AP24928 1970 aaKnown RBP5.29□□□□□ -1.56
HMGN1-218ENST00000490032 PNPLA7Q6ZV29 1317 aa5.29□□□□□ -1.56
HMGN1-218ENST00000490032 DRGXA6NNA5 263 aa5.29□□□□□ -1.56
HMGN1-218ENST00000490032 NDUFA10O95299 355 aa5.29□□□□□ -1.56
HMGN1-218ENST00000490032 GUCY1A2P33402 732 aa5.29□□□□□ -1.56
HMGN1-218ENST00000490032 MCAMP43121 646 aa5.29□□□□□ -1.56
HMGN1-218ENST00000490032 SLC5A3P53794 718 aa5.29□□□□□ -1.56
HMGN1-218ENST00000490032 NANOS3P60323 173 aaKnown RBP5.29□□□□□ -1.56
HMGN1-218ENST00000490032 ERVK-21P61565 698 aa5.29□□□□□ -1.56
HMGN1-218ENST00000490032 ATXN7L2Q5T6C5 722 aaPredicted RBP5.29□□□□□ -1.56
HMGN1-218ENST00000490032 AGAP9Q5VTM2 703 aa5.29□□□□□ -1.56
HMGN1-218ENST00000490032 RNF219Q5W0B1 726 aaPredicted RBP5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms