RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 hCG_1642624A0A1W2PR95 340 aa16.92■□□□□ 0.3
UFD1-209ENST00000489406 ERICH2A1L162 156 aa16.92■□□□□ 0.3
UFD1-209ENST00000489406 CDX4O14627 284 aaPredicted RBP16.92■□□□□ 0.3
UFD1-209ENST00000489406 ADAM12O43184 909 aa16.92■□□□□ 0.3
UFD1-209ENST00000489406 OATP04181 439 aa16.92■□□□□ 0.3
UFD1-209ENST00000489406 POU2F2P09086 479 aa16.92■□□□□ 0.3
UFD1-209ENST00000489406 PSMC3P17980 439 aa16.92■□□□□ 0.3
UFD1-209ENST00000489406 SOX9P48436 509 aa16.92■□□□□ 0.3
UFD1-209ENST00000489406 SCNN1GP51170 649 aa16.92■□□□□ 0.3
UFD1-209ENST00000489406 DGKKQ5KSL6 1271 aa16.92■□□□□ 0.3
UFD1-209ENST00000489406 UBXN11Q5T124 520 aa16.92■□□□□ 0.3
UFD1-209ENST00000489406 VITQ6UXI7 678 aa16.92■□□□□ 0.3
UFD1-209ENST00000489406 CATIPQ7Z7H3 387 aa16.92■□□□□ 0.3
UFD1-209ENST00000489406 CHCHD4Q8N4Q1 142 aa16.92■□□□□ 0.3
UFD1-209ENST00000489406 DUSP15Q9H1R2 295 aaPredicted RBP16.92■□□□□ 0.3
UFD1-209ENST00000489406 AGPAT5Q9NUQ2 364 aa16.92■□□□□ 0.3
UFD1-209ENST00000489406 TCEAL9Q9UHQ7 104 aa16.92■□□□□ 0.3
UFD1-209ENST00000489406 ADAM28Q9UKQ2 775 aa16.92■□□□□ 0.3
UFD1-209ENST00000489406 PCDHA10Q9Y5I2 948 aa16.92■□□□□ 0.3
UFD1-209ENST00000489406 ARL5CA6NH57 179 aa16.91■□□□□ 0.3
UFD1-209ENST00000489406 IPO5O00410 1097 aaKnown RBP16.91■□□□□ 0.3
UFD1-209ENST00000489406 ZNF263O14978 683 aa16.91■□□□□ 0.3
UFD1-209ENST00000489406 ZNF862O60290 1169 aa16.91■□□□□ 0.3
UFD1-209ENST00000489406 ITGA4P13612 1032 aa16.91■□□□□ 0.3
UFD1-209ENST00000489406 PLA2G2AP14555 144 aa16.91■□□□□ 0.3
UFD1-209ENST00000489406 MLH1P40692 756 aa16.91■□□□□ 0.3
UFD1-209ENST00000489406 SIM1P81133 766 aaPredicted RBP16.91■□□□□ 0.3
UFD1-209ENST00000489406 PLA2G4DQ86XP0 818 aa16.91■□□□□ 0.3
UFD1-209ENST00000489406 RHPN2Q8IUC4 686 aa16.91■□□□□ 0.3
UFD1-209ENST00000489406 KSR1Q8IVT5 923 aa16.91■□□□□ 0.3
UFD1-209ENST00000489406 CMTR1Q8N1G2 835 aaKnown RBP16.91■□□□□ 0.3
UFD1-209ENST00000489406 SAMM50Q9Y512 469 aa16.91■□□□□ 0.3
UFD1-209ENST00000489406 HECTD1Q9ULT8 2610 aa16.91■□□□□ 0.3
UFD1-209ENST00000489406 CELSR3Q9NYQ7 3312 aa16.9■□□□□ 0.3
UFD1-209ENST00000489406 CCDC163A0A0D9SF12 145 aa16.9■□□□□ 0.3
UFD1-209ENST00000489406 BCLAF3A2AJT9 711 aaKnown RBP16.9■□□□□ 0.3
UFD1-209ENST00000489406 FAM221BA6H8Z2 402 aa16.9■□□□□ 0.3
UFD1-209ENST00000489406 TADA2AO75478 443 aa16.9■□□□□ 0.3
UFD1-209ENST00000489406 AKAP3O75969 853 aa16.9■□□□□ 0.3
UFD1-209ENST00000489406 PLEKHA8P1O95397 391 aa16.9■□□□□ 0.3
UFD1-209ENST00000489406 VIPR2P41587 438 aa16.9■□□□□ 0.3
UFD1-209ENST00000489406 KPNA1P52294 538 aaPredicted RBP16.9■□□□□ 0.3
UFD1-209ENST00000489406 PSMD5Q16401 504 aa16.9■□□□□ 0.3
UFD1-209ENST00000489406 UVSSAQ2YD98 709 aa16.9■□□□□ 0.3
UFD1-209ENST00000489406 ZNF746Q6NUN9 644 aaPredicted RBP16.9■□□□□ 0.3
UFD1-209ENST00000489406 ZNF410Q86VK4 478 aa16.9■□□□□ 0.3
UFD1-209ENST00000489406 TICAM2Q86XR7 235 aa16.9■□□□□ 0.3
UFD1-209ENST00000489406 CEP57Q86XR8 500 aa16.9■□□□□ 0.3
UFD1-209ENST00000489406 SMAP1Q8IYB5 467 aaPredicted RBP16.9■□□□□ 0.3
UFD1-209ENST00000489406 SMG8Q8ND04 991 aaKnown RBP16.9■□□□□ 0.3
UFD1-209ENST00000489406 LNX1Q8TBB1 728 aaPredicted RBP16.9■□□□□ 0.3
UFD1-209ENST00000489406 CSGALNACT1Q8TDX6 532 aa16.9■□□□□ 0.3
UFD1-209ENST00000489406 ZFP42Q96MM3 310 aa16.9■□□□□ 0.3
UFD1-209ENST00000489406 NLRP4Q96MN2 994 aa16.9■□□□□ 0.3
UFD1-209ENST00000489406 RNF39Q9H2S5 420 aa16.9■□□□□ 0.3
UFD1-209ENST00000489406 SLC32A1Q9H598 525 aa16.9■□□□□ 0.3
UFD1-209ENST00000489406 UBN1Q9NPG3 1134 aa16.9■□□□□ 0.3
UFD1-209ENST00000489406 IGSF5Q9NSI5 407 aa16.9■□□□□ 0.3
UFD1-209ENST00000489406 SLC38A8A6NNN8 435 aa16.89■□□□□ 0.29
UFD1-209ENST00000489406 FAM86B1E9PN63 330 aa16.89■□□□□ 0.29
UFD1-209ENST00000489406 KHNYNO15037 678 aaKnown RBP16.89■□□□□ 0.29
UFD1-209ENST00000489406 KALRNO60229 2985 aa16.89■□□□□ 0.29
UFD1-209ENST00000489406 FAM86B2P0C5J1 330 aa16.89■□□□□ 0.29
UFD1-209ENST00000489406 PRKCEQ02156 737 aa16.89■□□□□ 0.29
UFD1-209ENST00000489406 ELF2Q15723 593 aa16.89■□□□□ 0.29
UFD1-209ENST00000489406 TXNDC11Q6PKC3 985 aa16.89■□□□□ 0.29
UFD1-209ENST00000489406 SRBD1Q8N5C6 995 aaKnown RBP16.89■□□□□ 0.29
UFD1-209ENST00000489406 CTCFLQ8NI51 663 aaPredicted RBP16.89■□□□□ 0.29
UFD1-209ENST00000489406 RILPL2Q969X0 211 aa16.89■□□□□ 0.29
UFD1-209ENST00000489406 TCEAL4Q96EI5 215 aa16.89■□□□□ 0.29
UFD1-209ENST00000489406 ASB16Q96NS5 453 aa16.89■□□□□ 0.29
UFD1-209ENST00000489406 ZNF577Q9BSK1 485 aa16.89■□□□□ 0.29
UFD1-209ENST00000489406 APOL6Q9BWW8 343 aa16.89■□□□□ 0.29
UFD1-209ENST00000489406 ANO3Q9BYT9 981 aa16.89■□□□□ 0.29
UFD1-209ENST00000489406 SUCLA2Q9P2R7 463 aaPredicted RBP16.89■□□□□ 0.29
UFD1-209ENST00000489406 PCDHB15Q9Y5E8 787 aa16.89■□□□□ 0.29
UFD1-209ENST00000489406 CACNA1EQ15878 2313 aa16.88■□□□□ 0.29
UFD1-209ENST00000489406 C1QL1O75973 258 aa16.88■□□□□ 0.29
UFD1-209ENST00000489406 SDSP20132 328 aa16.88■□□□□ 0.29
UFD1-209ENST00000489406 SMARCA1P28370 1054 aa16.88■□□□□ 0.29
UFD1-209ENST00000489406 DNM2P50570 870 aa16.88■□□□□ 0.29
UFD1-209ENST00000489406 MLLT6P55198 1093 aaPredicted RBP16.88■□□□□ 0.29
UFD1-209ENST00000489406 FAM171A1Q5VUB5 890 aa16.88■□□□□ 0.29
UFD1-209ENST00000489406 PKN3Q6P5Z2 889 aa16.88■□□□□ 0.29
UFD1-209ENST00000489406 NIPA1Q7RTP0 329 aa16.88■□□□□ 0.29
UFD1-209ENST00000489406 DEPDC1BQ8WUY9 529 aa16.88■□□□□ 0.29
UFD1-209ENST00000489406 PIK3R5Q8WYR1 880 aa16.88■□□□□ 0.29
UFD1-209ENST00000489406 MSANTD3Q96H12 275 aa16.88■□□□□ 0.29
UFD1-209ENST00000489406 TTPALQ9BTX7 342 aa16.88■□□□□ 0.29
UFD1-209ENST00000489406 CCDC86Q9H6F5 360 aaKnown RBP16.88■□□□□ 0.29
UFD1-209ENST00000489406 AVENQ9NQS1 362 aaPredicted RBP16.88■□□□□ 0.29
UFD1-209ENST00000489406 TBC1D22BQ9NU19 505 aa16.88■□□□□ 0.29
UFD1-209ENST00000489406 RAXQ9Y2V3 346 aa16.88■□□□□ 0.29
UFD1-209ENST00000489406 MYO18BQ8IUG5 2567 aa16.87■□□□□ 0.29
UFD1-209ENST00000489406 ASCC3Q8N3C0 2202 aaKnown RBP16.87■□□□□ 0.29
UFD1-209ENST00000489406 PATE3B3GLJ2 98 aa16.87■□□□□ 0.29
UFD1-209ENST00000489406 H0Y626 953 aa16.87■□□□□ 0.29
UFD1-209ENST00000489406 ARNTLO00327 626 aa16.87■□□□□ 0.29
UFD1-209ENST00000489406 DCLK1O15075 740 aa16.87■□□□□ 0.29
UFD1-209ENST00000489406 RHOBTB1O94844 696 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms