RNA–Protein interactions for RNA: ENST00000489131.1

TOP3A-206, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-206ENST00000489131 MEA1Q16626 185 aa13.93□□□□□ -0.18
TOP3A-206ENST00000489131 PTGISQ16647 500 aa13.93□□□□□ -0.18
TOP3A-206ENST00000489131 TCERG1LQ5VWI1 586 aa13.93□□□□□ -0.18
TOP3A-206ENST00000489131 KRT39Q6A163 491 aa13.93□□□□□ -0.18
TOP3A-206ENST00000489131 APBB1IPQ7Z5R6 666 aaPredicted RBP13.93□□□□□ -0.18
TOP3A-206ENST00000489131 RDH13Q8NBN7 331 aa13.93□□□□□ -0.18
TOP3A-206ENST00000489131 TMEM40Q8WWA1 233 aa13.93□□□□□ -0.18
TOP3A-206ENST00000489131 BAP1Q92560 729 aa13.93□□□□□ -0.18
TOP3A-206ENST00000489131 SYN2Q92777 582 aaPredicted RBP13.93□□□□□ -0.18
TOP3A-206ENST00000489131 ZNF333Q96JL9 665 aa13.93□□□□□ -0.18
TOP3A-206ENST00000489131 SCLT1Q96NL6 688 aa13.93□□□□□ -0.18
TOP3A-206ENST00000489131 OSMRQ99650 979 aa13.93□□□□□ -0.18
TOP3A-206ENST00000489131 CGRRF1Q99675 332 aa13.93□□□□□ -0.18
TOP3A-206ENST00000489131 TMEM117Q9H0C3 514 aa13.93□□□□□ -0.18
TOP3A-206ENST00000489131 NUCKS1Q9H1E3 243 aaKnown RBP13.93□□□□□ -0.18
TOP3A-206ENST00000489131 CDHR5Q9HBB8 845 aa13.93□□□□□ -0.18
TOP3A-206ENST00000489131 SIX2Q9NPC8 291 aa13.93□□□□□ -0.18
TOP3A-206ENST00000489131 ABHD10Q9NUJ1 306 aa13.93□□□□□ -0.18
TOP3A-206ENST00000489131 RBAKQ9NYW8 714 aaPredicted RBP13.93□□□□□ -0.18
TOP3A-206ENST00000489131 LUC7L2Q9Y383 392 aaKnown RBP13.93□□□□□ -0.18
TOP3A-206ENST00000489131 M0QZ92 97 aa13.92□□□□□ -0.18
TOP3A-206ENST00000489131 ARVCFO00192 962 aa13.92□□□□□ -0.18
TOP3A-206ENST00000489131 EPHB6O15197 1021 aa13.92□□□□□ -0.18
TOP3A-206ENST00000489131 B4GALT4O60513 344 aa13.92□□□□□ -0.18
TOP3A-206ENST00000489131 CLTAP09496 248 aa13.92□□□□□ -0.18
TOP3A-206ENST00000489131 ACOT2P49753 483 aa13.92□□□□□ -0.18
TOP3A-206ENST00000489131 KLK7P49862 253 aa13.92□□□□□ -0.18
TOP3A-206ENST00000489131 MXI1P50539 228 aa13.92□□□□□ -0.18
TOP3A-206ENST00000489131 CHMP4BP1P59074 171 aa13.92□□□□□ -0.18
TOP3A-206ENST00000489131 NCBP1Q09161 790 aaKnown RBP13.92□□□□□ -0.18
TOP3A-206ENST00000489131 CETN1Q12798 172 aa13.92□□□□□ -0.18
TOP3A-206ENST00000489131 ZBTB41Q5SVQ8 909 aa13.92□□□□□ -0.18
TOP3A-206ENST00000489131 KLHDC7AQ5VTJ3 777 aa13.92□□□□□ -0.18
TOP3A-206ENST00000489131 NOTUMQ6P988 496 aa13.92□□□□□ -0.18
TOP3A-206ENST00000489131 SLC27A1Q6PCB7 646 aa13.92□□□□□ -0.18
TOP3A-206ENST00000489131 TRIM65Q6PJ69 517 aa13.92□□□□□ -0.18
TOP3A-206ENST00000489131 ZSCAN30Q86W11 494 aa13.92□□□□□ -0.18
TOP3A-206ENST00000489131 WDR49Q8IV35 697 aa13.92□□□□□ -0.18
TOP3A-206ENST00000489131 NEK11Q8NG66 645 aa13.92□□□□□ -0.18
TOP3A-206ENST00000489131 OR8K1Q8NGG5 319 aa13.92□□□□□ -0.18
TOP3A-206ENST00000489131 PPP1R13LQ8WUF5 828 aa13.92□□□□□ -0.18
TOP3A-206ENST00000489131 DHX38Q92620 1227 aaKnown RBP13.92□□□□□ -0.18
TOP3A-206ENST00000489131 WNT8BQ93098 351 aa13.92□□□□□ -0.18
TOP3A-206ENST00000489131 ZNF668Q96K58 619 aaPredicted RBP13.92□□□□□ -0.18
TOP3A-206ENST00000489131 ADPGKQ9BRR6 497 aa13.92□□□□□ -0.18
TOP3A-206ENST00000489131 TCHPQ9BT92 498 aa13.92□□□□□ -0.18
TOP3A-206ENST00000489131 STARD7Q9NQZ5 370 aa13.92□□□□□ -0.18
TOP3A-206ENST00000489131 KCND1Q9NSA2 647 aa13.92□□□□□ -0.18
TOP3A-206ENST00000489131 GCNT4Q9P109 453 aa13.92□□□□□ -0.18
TOP3A-206ENST00000489131 ANK1P16157 1881 aa13.92□□□□□ -0.18
TOP3A-206ENST00000489131 RALGAPA2Q2PPJ7 1873 aa13.92□□□□□ -0.18
TOP3A-206ENST00000489131 CENPFP49454 3210 aa13.91□□□□□ -0.18
TOP3A-206ENST00000489131 NRDCO43847 1150 aa13.91□□□□□ -0.18
TOP3A-206ENST00000489131 ZC3H11AO75152 810 aaKnown RBP eCLIP13.91□□□□□ -0.18
TOP3A-206ENST00000489131 IL18RAPO95256 599 aa13.91□□□□□ -0.18
TOP3A-206ENST00000489131 CHRNA1P02708 482 aa13.91□□□□□ -0.18
TOP3A-206ENST00000489131 C4BPAP04003 597 aaKnown RBP13.91□□□□□ -0.18
TOP3A-206ENST00000489131 UCHL3P15374 230 aa13.91□□□□□ -0.18
TOP3A-206ENST00000489131 KRT9P35527 623 aa13.91□□□□□ -0.18
TOP3A-206ENST00000489131 GRM5P41594 1212 aa13.91□□□□□ -0.18
TOP3A-206ENST00000489131 CTCFP49711 727 aaPredicted RBP13.91□□□□□ -0.18
TOP3A-206ENST00000489131 ADKP55263 362 aaKnown RBP13.91□□□□□ -0.18
TOP3A-206ENST00000489131 WNT7BP56706 349 aa13.91□□□□□ -0.18
TOP3A-206ENST00000489131 TMEM62Q0P6H9 643 aa13.91□□□□□ -0.18
TOP3A-206ENST00000489131 LRMPQ12912 555 aa13.91□□□□□ -0.18
TOP3A-206ENST00000489131 MTFR1Q15390 333 aa13.91□□□□□ -0.18
TOP3A-206ENST00000489131 ENOX2Q16206 610 aaKnown RBP13.91□□□□□ -0.18
TOP3A-206ENST00000489131 ZACNQ401N2 412 aa13.91□□□□□ -0.18
TOP3A-206ENST00000489131 FAM47CQ5HY64 1035 aa13.91□□□□□ -0.18
TOP3A-206ENST00000489131 C1orf53Q5VUE5 145 aa13.91□□□□□ -0.18
TOP3A-206ENST00000489131 CATSPER4Q7RTX7 472 aa13.91□□□□□ -0.18
TOP3A-206ENST00000489131 USP38Q8NB14 1042 aa13.91□□□□□ -0.18
TOP3A-206ENST00000489131 EHBP1Q8NDI1 1231 aa13.91□□□□□ -0.18
TOP3A-206ENST00000489131 ZNF397Q8NF99 534 aaPredicted RBP13.91□□□□□ -0.18
TOP3A-206ENST00000489131 VTI1AQ96AJ9 217 aa13.91□□□□□ -0.18
TOP3A-206ENST00000489131 TSPAN18Q96SJ8 248 aa13.91□□□□□ -0.18
TOP3A-206ENST00000489131 TRAIPQ9BWF2 469 aa13.91□□□□□ -0.18
TOP3A-206ENST00000489131 LSM14BQ9BX40 385 aaKnown RBP13.91□□□□□ -0.18
TOP3A-206ENST00000489131 ASB7Q9H672 318 aa13.91□□□□□ -0.18
TOP3A-206ENST00000489131 MMRN2Q9H8L6 949 aa13.91□□□□□ -0.18
TOP3A-206ENST00000489131 CHST12Q9NRB3 414 aa13.91□□□□□ -0.18
TOP3A-206ENST00000489131 FAM207AQ9NSI2 230 aaPredicted RBP13.91□□□□□ -0.18
TOP3A-206ENST00000489131 PLAGL2Q9UPG8 496 aa13.91□□□□□ -0.18
TOP3A-206ENST00000489131 CDY2AQ9Y6F7 541 aa13.91□□□□□ -0.18
TOP3A-206ENST00000489131 ARHGAP6O43182 974 aa13.9□□□□□ -0.18
TOP3A-206ENST00000489131 CSDE1O75534 798 aaKnown RBP13.9□□□□□ -0.18
TOP3A-206ENST00000489131 SKILP12757 684 aa13.9□□□□□ -0.18
TOP3A-206ENST00000489131 SLC9A1P19634 815 aa13.9□□□□□ -0.18
TOP3A-206ENST00000489131 TNFSF9P41273 254 aa13.9□□□□□ -0.18
TOP3A-206ENST00000489131 MATR3P43243 847 aaKnown RBP eCLIP13.9□□□□□ -0.18
TOP3A-206ENST00000489131 GCLMP48507 274 aa13.9□□□□□ -0.18
TOP3A-206ENST00000489131 MNX1P50219 401 aaPredicted RBP13.9□□□□□ -0.18
TOP3A-206ENST00000489131 JAM2P57087 298 aa13.9□□□□□ -0.18
TOP3A-206ENST00000489131 SV2AQ7L0J3 742 aa13.9□□□□□ -0.18
TOP3A-206ENST00000489131 ZBTB33Q86T24 672 aa13.9□□□□□ -0.18
TOP3A-206ENST00000489131 FAM228AQ86W67 206 aa13.9□□□□□ -0.18
TOP3A-206ENST00000489131 NT5DC4Q86YG4 428 aa13.9□□□□□ -0.18
TOP3A-206ENST00000489131 CD302Q8IX05 232 aa13.9□□□□□ -0.18
TOP3A-206ENST00000489131 ANKLE1Q8NAG6 615 aa13.9□□□□□ -0.18
TOP3A-206ENST00000489131 FBXL13Q8NEE6 735 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms