RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 POLR2FP61218 127 aaKnown RBP10.86□□□□□ -0.67
USP11-211ENST00000489111 CCZ1BP86790 482 aa10.86□□□□□ -0.67
USP11-211ENST00000489111 CCZ1P86791 482 aaPredicted RBP10.86□□□□□ -0.67
USP11-211ENST00000489111 PPP3CAQ08209 521 aa10.86□□□□□ -0.67
USP11-211ENST00000489111 KCNMA1Q12791 1236 aa10.86□□□□□ -0.67
USP11-211ENST00000489111 PTK7Q13308 1070 aa10.86□□□□□ -0.67
USP11-211ENST00000489111 BIRC3Q13489 604 aa10.86□□□□□ -0.67
USP11-211ENST00000489111 SURF1Q15526 300 aa10.86□□□□□ -0.67
USP11-211ENST00000489111 SEZ6Q53EL9 994 aa10.86□□□□□ -0.67
USP11-211ENST00000489111 ZBTB41Q5SVQ8 909 aa10.86□□□□□ -0.67
USP11-211ENST00000489111 C1orf220Q5T0J3 134 aa10.86□□□□□ -0.67
USP11-211ENST00000489111 KRT39Q6A163 491 aa10.86□□□□□ -0.67
USP11-211ENST00000489111 NOTUMQ6P988 496 aa10.86□□□□□ -0.67
USP11-211ENST00000489111 TRIM65Q6PJ69 517 aa10.86□□□□□ -0.67
USP11-211ENST00000489111 RRAGAQ7L523 313 aa10.86□□□□□ -0.67
USP11-211ENST00000489111 CDR2LQ86X02 465 aaPredicted RBP10.86□□□□□ -0.67
USP11-211ENST00000489111 FAM212AQ96EL1 285 aa10.86□□□□□ -0.67
USP11-211ENST00000489111 DEFB118Q96PH6 123 aa10.86□□□□□ -0.67
USP11-211ENST00000489111 DNAJC7Q99615 494 aa10.86□□□□□ -0.67
USP11-211ENST00000489111 CGRRF1Q99675 332 aa10.86□□□□□ -0.67
USP11-211ENST00000489111 CELF4Q9BZC1 486 aaKnown RBP10.86□□□□□ -0.67
USP11-211ENST00000489111 RNF208Q9H0X6 261 aa10.86□□□□□ -0.67
USP11-211ENST00000489111 NUCKS1Q9H1E3 243 aaKnown RBP10.86□□□□□ -0.67
USP11-211ENST00000489111 GANQ9H2C0 597 aa10.86□□□□□ -0.67
USP11-211ENST00000489111 RPF1Q9H9Y2 349 aaKnown RBP10.86□□□□□ -0.67
USP11-211ENST00000489111 PDE11AQ9HCR9 933 aa10.86□□□□□ -0.67
USP11-211ENST00000489111 PTPRHQ9HD43 1115 aa10.86□□□□□ -0.67
USP11-211ENST00000489111 PAK6Q9NQU5 681 aaPredicted RBP10.86□□□□□ -0.67
USP11-211ENST00000489111 TOPORSQ9NS56 1045 aaPredicted RBP10.86□□□□□ -0.67
USP11-211ENST00000489111 PHF24Q9UPV7 400 aa10.86□□□□□ -0.67
USP11-211ENST00000489111 PIN4Q9Y237 131 aaKnown RBP10.86□□□□□ -0.67
USP11-211ENST00000489111 DAAM1Q9Y4D1 1078 aa10.86□□□□□ -0.67
USP11-211ENST00000489111 CDY2AQ9Y6F7 541 aa10.86□□□□□ -0.67
USP11-211ENST00000489111 GRIN2DO15399 1336 aa10.85□□□□□ -0.67
USP11-211ENST00000489111 A0A1B0GUA9 196 aa10.85□□□□□ -0.67
USP11-211ENST00000489111 PMM2O15305 246 aa10.85□□□□□ -0.67
USP11-211ENST00000489111 ARHGAP6O43182 974 aa10.85□□□□□ -0.67
USP11-211ENST00000489111 FAM189A1O60320 539 aa10.85□□□□□ -0.67
USP11-211ENST00000489111 CLSTN1O94985 981 aa10.85□□□□□ -0.67
USP11-211ENST00000489111 NPTXRO95502 500 aa10.85□□□□□ -0.67
USP11-211ENST00000489111 ACTN1P12814 892 aa10.85□□□□□ -0.67
USP11-211ENST00000489111 SLC9A1P19634 815 aa10.85□□□□□ -0.67
USP11-211ENST00000489111 RFX1P22670 979 aa10.85□□□□□ -0.67
USP11-211ENST00000489111 TNFSF9P41273 254 aa10.85□□□□□ -0.67
USP11-211ENST00000489111 PIK3CAP42336 1068 aa10.85□□□□□ -0.67
USP11-211ENST00000489111 AP3M2P53677 418 aa10.85□□□□□ -0.67
USP11-211ENST00000489111 OSTNP61366 133 aa10.85□□□□□ -0.67
USP11-211ENST00000489111 KLHDC7AQ5VTJ3 777 aa10.85□□□□□ -0.67
USP11-211ENST00000489111 PDXDC1Q6P996 788 aa10.85□□□□□ -0.67
USP11-211ENST00000489111 SLC27A1Q6PCB7 646 aa10.85□□□□□ -0.67
USP11-211ENST00000489111 CRELD2Q6UXH1 353 aaPredicted RBP10.85□□□□□ -0.67
USP11-211ENST00000489111 CYP26C1Q6V0L0 522 aa10.85□□□□□ -0.67
USP11-211ENST00000489111 RPAINQ86UA6 219 aa10.85□□□□□ -0.67
USP11-211ENST00000489111 WDR49Q8IV35 697 aa10.85□□□□□ -0.67
USP11-211ENST00000489111 DNAJC5GQ8N7S2 189 aa10.85□□□□□ -0.67
USP11-211ENST00000489111 FBXL13Q8NEE6 735 aa10.85□□□□□ -0.67
USP11-211ENST00000489111 SPAG5Q96R06 1193 aa10.85□□□□□ -0.67
USP11-211ENST00000489111 POP1Q99575 1024 aaKnown RBP10.85□□□□□ -0.67
USP11-211ENST00000489111 CCDC94Q9BW85 323 aaPredicted RBP10.85□□□□□ -0.67
USP11-211ENST00000489111 SEZ6LQ9BYH1 1024 aa10.85□□□□□ -0.67
USP11-211ENST00000489111 TRIM6Q9C030 488 aaPredicted RBP10.85□□□□□ -0.67
USP11-211ENST00000489111 SENP6Q9GZR1 1112 aaPredicted RBP10.85□□□□□ -0.67
USP11-211ENST00000489111 TMEM117Q9H0C3 514 aa10.85□□□□□ -0.67
USP11-211ENST00000489111 CDHR5Q9HBB8 845 aa10.85□□□□□ -0.67
USP11-211ENST00000489111 NLRC4Q9NPP4 1024 aa10.85□□□□□ -0.67
USP11-211ENST00000489111 TRMT13Q9NUP7 481 aaKnown RBP10.85□□□□□ -0.67
USP11-211ENST00000489111 AGPAT5Q9NUQ2 364 aa10.85□□□□□ -0.67
USP11-211ENST00000489111 CPSF3Q9UKF6 684 aaKnown RBP10.85□□□□□ -0.67
USP11-211ENST00000489111 PYCARDQ9ULZ3 195 aa10.85□□□□□ -0.67
USP11-211ENST00000489111 LRRC53A6NM62 1247 aa10.84□□□□□ -0.67
USP11-211ENST00000489111 RNF225M0QZC1 329 aaPredicted RBP10.84□□□□□ -0.67
USP11-211ENST00000489111 CAND2O75155 1236 aa10.84□□□□□ -0.67
USP11-211ENST00000489111 PHACTR2O75167 634 aa10.84□□□□□ -0.67
USP11-211ENST00000489111 NOL4O94818 638 aa10.84□□□□□ -0.67
USP11-211ENST00000489111 TMEM191BP0C7N4 346 aa10.84□□□□□ -0.67
USP11-211ENST00000489111 STAG3L1P0CL83 205 aa10.84□□□□□ -0.67
USP11-211ENST00000489111 HSPA8P11142 646 aaKnown RBP10.84□□□□□ -0.67
USP11-211ENST00000489111 UCHL3P15374 230 aa10.84□□□□□ -0.67
USP11-211ENST00000489111 KCNJ6P48051 423 aa10.84□□□□□ -0.67
USP11-211ENST00000489111 YARSP54577 528 aaKnown RBP10.84□□□□□ -0.67
USP11-211ENST00000489111 MCCD1P59942 119 aaPredicted RBP10.84□□□□□ -0.67
USP11-211ENST00000489111 CLDN10P78369 228 aa10.84□□□□□ -0.67
USP11-211ENST00000489111 APBA1Q02410 837 aa10.84□□□□□ -0.67
USP11-211ENST00000489111 RAPGEF1Q13905 1077 aa10.84□□□□□ -0.67
USP11-211ENST00000489111 MTFR1Q15390 333 aa10.84□□□□□ -0.67
USP11-211ENST00000489111 ENOX2Q16206 610 aaKnown RBP10.84□□□□□ -0.67
USP11-211ENST00000489111 EPC2Q52LR7 807 aa10.84□□□□□ -0.67
USP11-211ENST00000489111 SFMBT2Q5VUG0 894 aa10.84□□□□□ -0.67
USP11-211ENST00000489111 LMBRD2Q68DH5 695 aaPredicted RBP10.84□□□□□ -0.67
USP11-211ENST00000489111 FBXO46Q6PJ61 603 aaPredicted RBP10.84□□□□□ -0.67
USP11-211ENST00000489111 SV2AQ7L0J3 742 aa10.84□□□□□ -0.67
USP11-211ENST00000489111 TMTC1Q8IUR5 882 aa10.84□□□□□ -0.67
USP11-211ENST00000489111 FMNL3Q8IVF7 1028 aa10.84□□□□□ -0.67
USP11-211ENST00000489111 EHBP1Q8NDI1 1231 aa10.84□□□□□ -0.67
USP11-211ENST00000489111 TMEM40Q8WWA1 233 aa10.84□□□□□ -0.67
USP11-211ENST00000489111 TMX1Q9H3N1 280 aa10.84□□□□□ -0.67
USP11-211ENST00000489111 APEX2Q9UBZ4 518 aa10.84□□□□□ -0.67
USP11-211ENST00000489111 FBXL5Q9UKA1 691 aa10.84□□□□□ -0.67
USP11-211ENST00000489111 MYO6Q9UM54 1294 aa10.84□□□□□ -0.67
USP11-211ENST00000489111 FHOD1Q9Y613 1164 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms