RNA–Protein interactions for RNA: ENST00000489019.6

CALD1-221, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 422 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-221ENST00000489019 YTHDC2Q9H6S0 1430 aaKnown RBP3.6□□□□□ -1.83
CALD1-221ENST00000489019 RIMS2Q9UQ26 1411 aa3.6□□□□□ -1.83
CALD1-221ENST00000489019 REREQ9P2R6 1566 aa3.59□□□□□ -1.83
CALD1-221ENST00000489019 UBE2QL1A1L167 161 aa3.59□□□□□ -1.83
CALD1-221ENST00000489019 KDM1AO60341 852 aa3.59□□□□□ -1.83
CALD1-221ENST00000489019 SEC24DO94855 1032 aaPredicted RBP3.59□□□□□ -1.83
CALD1-221ENST00000489019 AMHP03971 560 aa3.59□□□□□ -1.83
CALD1-221ENST00000489019 CLEC2LP0C7M8 214 aa3.59□□□□□ -1.83
CALD1-221ENST00000489019 U2AF1L5P0DN76 240 aaPredicted RBP3.59□□□□□ -1.83
CALD1-221ENST00000489019 VSIG10L2P0DP72 767 aa3.59□□□□□ -1.83
CALD1-221ENST00000489019 GAAP10253 952 aa3.59□□□□□ -1.83
CALD1-221ENST00000489019 KIR2DL3P43628 341 aa3.59□□□□□ -1.83
CALD1-221ENST00000489019 MASP1P48740 699 aa3.59□□□□□ -1.83
CALD1-221ENST00000489019 MTHFSP49914 203 aa3.59□□□□□ -1.83
CALD1-221ENST00000489019 MANFP55145 182 aaKnown RBP3.59□□□□□ -1.83
CALD1-221ENST00000489019 ZXDAP98168 799 aa3.59□□□□□ -1.83
CALD1-221ENST00000489019 U2AF1Q01081 240 aaKnown RBP eCLIP3.59□□□□□ -1.83
CALD1-221ENST00000489019 STRN3Q13033 797 aa3.59□□□□□ -1.83
CALD1-221ENST00000489019 PDCD1Q15116 288 aa3.59□□□□□ -1.83
CALD1-221ENST00000489019 GAGE13Q4V321 117 aa3.59□□□□□ -1.83
CALD1-221ENST00000489019 ATP13A4Q4VNC1 1196 aa3.59□□□□□ -1.83
CALD1-221ENST00000489019 CRIP3Q6Q6R5 217 aa3.59□□□□□ -1.83
CALD1-221ENST00000489019 FRMD7Q6ZUT3 714 aa3.59□□□□□ -1.83
CALD1-221ENST00000489019 C11orf74Q86VG3 221 aa3.59□□□□□ -1.83
CALD1-221ENST00000489019 SLC41A1Q8IVJ1 513 aa3.59□□□□□ -1.83
CALD1-221ENST00000489019 NGEFQ8N5V2 710 aa3.59□□□□□ -1.83
CALD1-221ENST00000489019 IL17DQ8TAD2 202 aa3.59□□□□□ -1.83
CALD1-221ENST00000489019 FERMT2Q96AC1 680 aa3.59□□□□□ -1.83
CALD1-221ENST00000489019 RUNDC1Q96C34 613 aa3.59□□□□□ -1.83
CALD1-221ENST00000489019 FAM89AQ96GI7 184 aa3.59□□□□□ -1.83
CALD1-221ENST00000489019 HIST1H2AHQ96KK5 128 aa3.59□□□□□ -1.83
CALD1-221ENST00000489019 HIST1H2AJQ99878 128 aa3.59□□□□□ -1.83
CALD1-221ENST00000489019 OSBPL6Q9BZF3 934 aa3.59□□□□□ -1.83
CALD1-221ENST00000489019 PNNQ9H307 717 aaKnown RBP3.59□□□□□ -1.83
CALD1-221ENST00000489019 IL23AQ9NPF7 189 aa3.59□□□□□ -1.83
CALD1-221ENST00000489019 ING3Q9NXR8 418 aa3.59□□□□□ -1.83
CALD1-221ENST00000489019 USP18Q9UMW8 372 aa3.59□□□□□ -1.83
CALD1-221ENST00000489019 NSD2O96028 1365 aa3.59□□□□□ -1.83
CALD1-221ENST00000489019 PLEKHH1Q9ULM0 1364 aa3.59□□□□□ -1.83
CALD1-221ENST00000489019 ARHGEF40Q8TER5 1519 aa3.59□□□□□ -1.84
CALD1-221ENST00000489019 TULP4Q9NRJ4 1543 aa3.59□□□□□ -1.84
CALD1-221ENST00000489019 ALKQ9UM73 1620 aa3.59□□□□□ -1.84
CALD1-221ENST00000489019 DAPK3O43293 454 aa3.58□□□□□ -1.84
CALD1-221ENST00000489019 LY86O95711 162 aa3.58□□□□□ -1.84
CALD1-221ENST00000489019 C6P13671 934 aa3.58□□□□□ -1.84
CALD1-221ENST00000489019 HIBADHP31937 336 aaKnown RBP3.58□□□□□ -1.84
CALD1-221ENST00000489019 SLFN5Q08AF3 891 aa3.58□□□□□ -1.84
CALD1-221ENST00000489019 TRIM25Q14258 630 aaKnown RBP3.58□□□□□ -1.84
CALD1-221ENST00000489019 PITRM1Q5JRX3 1037 aa3.58□□□□□ -1.84
CALD1-221ENST00000489019 RNF207Q6ZRF8 634 aa3.58□□□□□ -1.84
CALD1-221ENST00000489019 DDX46Q7L014 1031 aaKnown RBP3.58□□□□□ -1.84
CALD1-221ENST00000489019 SGMS1Q86VZ5 419 aa3.58□□□□□ -1.84
CALD1-221ENST00000489019 RASSF3Q86WH2 238 aa3.58□□□□□ -1.84
CALD1-221ENST00000489019 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.58□□□□□ -1.84
CALD1-221ENST00000489019 D2HGDHQ8N465 521 aa3.58□□□□□ -1.84
CALD1-221ENST00000489019 CDYL2Q8N8U2 506 aa3.58□□□□□ -1.84
CALD1-221ENST00000489019 CLRN3Q8NCR9 226 aa3.58□□□□□ -1.84
CALD1-221ENST00000489019 GAB3Q8WWW8 586 aa3.58□□□□□ -1.84
CALD1-221ENST00000489019 USP7Q93009 1102 aa3.58□□□□□ -1.84
CALD1-221ENST00000489019 ZNF503Q96F45 646 aa3.58□□□□□ -1.84
CALD1-221ENST00000489019 VPS11Q9H270 941 aa3.58□□□□□ -1.84
CALD1-221ENST00000489019 TMPRSS5Q9H3S3 457 aa3.58□□□□□ -1.84
CALD1-221ENST00000489019 IFT22Q9H7X7 185 aa3.58□□□□□ -1.84
CALD1-221ENST00000489019 TOPORSQ9NS56 1045 aaPredicted RBP3.58□□□□□ -1.84
CALD1-221ENST00000489019 EVLQ9UI08 416 aaPredicted RBP3.58□□□□□ -1.84
CALD1-221ENST00000489019 PRSS50Q9UI38 385 aa3.58□□□□□ -1.84
CALD1-221ENST00000489019 SYNPO2Q9UMS6 1093 aa3.58□□□□□ -1.84
CALD1-221ENST00000489019 RRP7AQ9Y3A4 280 aaKnown RBP3.58□□□□□ -1.84
CALD1-221ENST00000489019 NUMBLQ9Y6R0 609 aa3.58□□□□□ -1.84
CALD1-221ENST00000489019 MAPK8IP3Q9UPT6 1336 aa3.58□□□□□ -1.84
CALD1-221ENST00000489019 A0A1W2PP64 1363 aa3.58□□□□□ -1.84
CALD1-221ENST00000489019 ZMYM3Q14202 1370 aa3.58□□□□□ -1.84
CALD1-221ENST00000489019 TNRQ92752 1358 aa3.58□□□□□ -1.84
CALD1-221ENST00000489019 A2ML1A8K2U0 1454 aa3.58□□□□□ -1.84
CALD1-221ENST00000489019 SPATA31D1Q6ZQQ2 1576 aa3.58□□□□□ -1.84
CALD1-221ENST00000489019 USP32Q8NFA0 1604 aa3.58□□□□□ -1.84
CALD1-221ENST00000489019 KIF13AQ9H1H9 1805 aa3.58□□□□□ -1.84
CALD1-221ENST00000489019 GOLGA8BA8MQT2 603 aa3.57□□□□□ -1.84
CALD1-221ENST00000489019 CAPN14A8MX76 684 aa3.57□□□□□ -1.84
CALD1-221ENST00000489019 TCERG1O14776 1098 aaKnown RBP3.57□□□□□ -1.84
CALD1-221ENST00000489019 MAFGO15525 162 aa3.57□□□□□ -1.84
CALD1-221ENST00000489019 EIF5BO60841 1220 aaKnown RBP3.57□□□□□ -1.84
CALD1-221ENST00000489019 RAB11FIP3O75154 756 aa3.57□□□□□ -1.84
CALD1-221ENST00000489019 STC2O76061 302 aa3.57□□□□□ -1.84
CALD1-221ENST00000489019 FSBPO95073 299 aa3.57□□□□□ -1.84
CALD1-221ENST00000489019 CFBP00751 764 aa3.57□□□□□ -1.84
CALD1-221ENST00000489019 JUNP05412 331 aaKnown RBP3.57□□□□□ -1.84
CALD1-221ENST00000489019 LPLP06858 475 aa3.57□□□□□ -1.84
CALD1-221ENST00000489019 C1SP09871 688 aa3.57□□□□□ -1.84
CALD1-221ENST00000489019 TACR2P21452 398 aa3.57□□□□□ -1.84
CALD1-221ENST00000489019 ACRV1P26436 265 aa3.57□□□□□ -1.84
CALD1-221ENST00000489019 PTPRMP28827 1452 aa3.57□□□□□ -1.84
CALD1-221ENST00000489019 NKTRP30414 1462 aaKnown RBP3.57□□□□□ -1.84
CALD1-221ENST00000489019 ANP32AP39687 249 aaKnown RBP3.57□□□□□ -1.84
CALD1-221ENST00000489019 DGCR2P98153 550 aa3.57□□□□□ -1.84
CALD1-221ENST00000489019 MAN2A1Q16706 1144 aa3.57□□□□□ -1.84
CALD1-221ENST00000489019 NRN1LQ496H8 165 aa3.57□□□□□ -1.84
CALD1-221ENST00000489019 CT83Q5H943 113 aa3.57□□□□□ -1.84
CALD1-221ENST00000489019 MIIPQ5JXC2 388 aa3.57□□□□□ -1.84
CALD1-221ENST00000489019 EGFLAMQ63HQ2 1017 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms