RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 EPCAMP16422 314 aa15.18■□□□□ 0.02
SPTLC1-207ENST00000488921 KLRC2P26717 231 aa15.18■□□□□ 0.02
SPTLC1-207ENST00000488921 LONP1P36776 959 aaKnown RBP15.18■□□□□ 0.02
SPTLC1-207ENST00000488921 UBA7P41226 1012 aa15.18■□□□□ 0.02
SPTLC1-207ENST00000488921 SMTNP53814 917 aa15.18■□□□□ 0.02
SPTLC1-207ENST00000488921 CREMQ03060 361 aa15.18■□□□□ 0.02
SPTLC1-207ENST00000488921 HSP90AA2PQ14568 343 aaPredicted RBP15.18■□□□□ 0.02
SPTLC1-207ENST00000488921 TMEM119Q4V9L6 283 aa15.18■□□□□ 0.02
SPTLC1-207ENST00000488921 FUT10Q6P4F1 479 aa15.18■□□□□ 0.02
SPTLC1-207ENST00000488921 GPR65Q8IYL9 337 aa15.18■□□□□ 0.02
SPTLC1-207ENST00000488921 RNF168Q8IYW5 571 aaPredicted RBP15.18■□□□□ 0.02
SPTLC1-207ENST00000488921 DAW1Q8N136 415 aa15.18■□□□□ 0.02
SPTLC1-207ENST00000488921 SLC22A17Q8WUG5 538 aa15.18■□□□□ 0.02
SPTLC1-207ENST00000488921 INTS4Q96HW7 963 aaKnown RBP15.18■□□□□ 0.02
SPTLC1-207ENST00000488921 RPGRIP1Q96KN7 1286 aa15.18■□□□□ 0.02
SPTLC1-207ENST00000488921 KLHL5Q96PQ7 755 aa15.18■□□□□ 0.02
SPTLC1-207ENST00000488921 PNMA5Q96PV4 448 aa15.18■□□□□ 0.02
SPTLC1-207ENST00000488921 APOL5Q9BWW9 433 aa15.18■□□□□ 0.02
SPTLC1-207ENST00000488921 SFXN1Q9H9B4 322 aa15.18■□□□□ 0.02
SPTLC1-207ENST00000488921 POLD4Q9HCU8 107 aa15.18■□□□□ 0.02
SPTLC1-207ENST00000488921 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.18■□□□□ 0.02
SPTLC1-207ENST00000488921 TNFSF13BQ9Y275 285 aa15.18■□□□□ 0.02
SPTLC1-207ENST00000488921 HCN4Q9Y3Q4 1203 aa15.18■□□□□ 0.02
SPTLC1-207ENST00000488921 SF3B1O75533 1304 aaKnown RBP eCLIP15.17■□□□□ 0.02
SPTLC1-207ENST00000488921 FAM86C2PA6NEL3 165 aa15.17■□□□□ 0.02
SPTLC1-207ENST00000488921 H0YCG3 227 aa15.17■□□□□ 0.02
SPTLC1-207ENST00000488921 C2CD2LO14523 706 aa15.17■□□□□ 0.02
SPTLC1-207ENST00000488921 LILRB3O75022 631 aa15.17■□□□□ 0.02
SPTLC1-207ENST00000488921 EFEMP2O95967 443 aa15.17■□□□□ 0.02
SPTLC1-207ENST00000488921 CNPP09543 421 aaKnown RBP15.17■□□□□ 0.02
SPTLC1-207ENST00000488921 PLA2G4BP0C869 781 aa15.17■□□□□ 0.02
SPTLC1-207ENST00000488921 CLCN4P51793 760 aa15.17■□□□□ 0.02
SPTLC1-207ENST00000488921 SLC12A3P55017 1021 aa15.17■□□□□ 0.02
SPTLC1-207ENST00000488921 DSG1Q02413 1049 aa15.17■□□□□ 0.02
SPTLC1-207ENST00000488921 STRN3Q13033 797 aa15.17■□□□□ 0.02
SPTLC1-207ENST00000488921 MAPK7Q13164 816 aa15.17■□□□□ 0.02
SPTLC1-207ENST00000488921 USP41Q3LFD5 358 aa15.17■□□□□ 0.02
SPTLC1-207ENST00000488921 ZNF568Q3ZCX4 644 aa15.17■□□□□ 0.02
SPTLC1-207ENST00000488921 RARS2Q5T160 578 aaKnown RBP15.17■□□□□ 0.02
SPTLC1-207ENST00000488921 NT5DC1Q5TFE4 455 aa15.17■□□□□ 0.02
SPTLC1-207ENST00000488921 EEF1DP3Q658K8 133 aa15.17■□□□□ 0.02
SPTLC1-207ENST00000488921 RASSF8Q8NHQ8 419 aa15.17■□□□□ 0.02
SPTLC1-207ENST00000488921 SPIRE2Q8WWL2 714 aa15.17■□□□□ 0.02
SPTLC1-207ENST00000488921 FBXL18Q96ME1 805 aa15.17■□□□□ 0.02
SPTLC1-207ENST00000488921 C11orf16Q9NQ32 467 aa15.17■□□□□ 0.02
SPTLC1-207ENST00000488921 TOPORSQ9NS56 1045 aaPredicted RBP15.17■□□□□ 0.02
SPTLC1-207ENST00000488921 MUTYHQ9UIF7 546 aa15.17■□□□□ 0.02
SPTLC1-207ENST00000488921 GDAQ9Y2T3 454 aa15.17■□□□□ 0.02
SPTLC1-207ENST00000488921 PTGESO14684 152 aa15.16■□□□□ 0.02
SPTLC1-207ENST00000488921 TADA2AO75478 443 aa15.16■□□□□ 0.02
SPTLC1-207ENST00000488921 PLS3P13797 630 aa15.16■□□□□ 0.02
SPTLC1-207ENST00000488921 YARSP54577 528 aaKnown RBP15.16■□□□□ 0.02
SPTLC1-207ENST00000488921 SF3A1Q15459 793 aaKnown RBP15.16■□□□□ 0.02
SPTLC1-207ENST00000488921 PLIN2Q99541 437 aa15.16■□□□□ 0.02
SPTLC1-207ENST00000488921 ACO2Q99798 780 aaKnown RBP15.16■□□□□ 0.02
SPTLC1-207ENST00000488921 NTPCRQ9BSD7 190 aaKnown RBP15.16■□□□□ 0.02
SPTLC1-207ENST00000488921 CCDC94Q9BW85 323 aaPredicted RBP15.16■□□□□ 0.02
SPTLC1-207ENST00000488921 RXFP1Q9HBX9 757 aa15.16■□□□□ 0.02
SPTLC1-207ENST00000488921 CHST7Q9NS84 486 aa15.16■□□□□ 0.02
SPTLC1-207ENST00000488921 LARSQ9P2J5 1176 aaKnown RBP15.16■□□□□ 0.02
SPTLC1-207ENST00000488921 ODF2LQ9ULJ1 636 aa15.16■□□□□ 0.02
SPTLC1-207ENST00000488921 USP20Q9Y2K6 914 aa15.16■□□□□ 0.02
SPTLC1-207ENST00000488921 CASTOR2A6NHX0 329 aa15.15■□□□□ 0.02
SPTLC1-207ENST00000488921 F8W810 466 aa15.15■□□□□ 0.02
SPTLC1-207ENST00000488921 K7ELQ4 463 aaPredicted RBP15.15■□□□□ 0.02
SPTLC1-207ENST00000488921 SLC16A4O15374 487 aa15.15■□□□□ 0.02
SPTLC1-207ENST00000488921 GLUD1P00367 558 aa15.15■□□□□ 0.02
SPTLC1-207ENST00000488921 C1RP00736 705 aa15.15■□□□□ 0.02
SPTLC1-207ENST00000488921 SCP2P22307 547 aa15.15■□□□□ 0.02
SPTLC1-207ENST00000488921 GRM5P41594 1212 aa15.15■□□□□ 0.02
SPTLC1-207ENST00000488921 RAD51AP2Q09MP3 1159 aa15.15■□□□□ 0.02
SPTLC1-207ENST00000488921 ELAVL2Q12926 359 aaKnown RBP15.15■□□□□ 0.02
SPTLC1-207ENST00000488921 ATAT1Q5SQI0 421 aa15.15■□□□□ 0.02
SPTLC1-207ENST00000488921 KIAA0319Q5VV43 1072 aa15.15■□□□□ 0.02
SPTLC1-207ENST00000488921 MPZL3Q6UWV2 235 aa15.15■□□□□ 0.02
SPTLC1-207ENST00000488921 CDT1Q9H211 546 aa15.15■□□□□ 0.02
SPTLC1-207ENST00000488921 POMKQ9H5K3 350 aa15.15■□□□□ 0.02
SPTLC1-207ENST00000488921 FNIP2Q9P278 1114 aa15.15■□□□□ 0.02
SPTLC1-207ENST00000488921 VWA8A3KMH1 1905 aa15.15■□□□□ 0.02
SPTLC1-207ENST00000488921 TEX28O15482 410 aa15.14■□□□□ 0.01
SPTLC1-207ENST00000488921 MCF2P10911 925 aa15.14■□□□□ 0.01
SPTLC1-207ENST00000488921 SYT1P21579 422 aa15.14■□□□□ 0.01
SPTLC1-207ENST00000488921 NAB2Q15742 525 aa15.14■□□□□ 0.01
SPTLC1-207ENST00000488921 PDXDC1Q6P996 788 aa15.14■□□□□ 0.01
SPTLC1-207ENST00000488921 C15orf39Q6ZRI6 1047 aa15.14■□□□□ 0.01
SPTLC1-207ENST00000488921 TAS1R3Q7RTX0 852 aa15.14■□□□□ 0.01
SPTLC1-207ENST00000488921 TAS1R1Q7RTX1 841 aa15.14■□□□□ 0.01
SPTLC1-207ENST00000488921 C12orf76Q8N812 135 aaPredicted RBP15.14■□□□□ 0.01
SPTLC1-207ENST00000488921 HDAC7Q8WUI4 952 aa15.14■□□□□ 0.01
SPTLC1-207ENST00000488921 UROC1Q96N76 676 aa15.14■□□□□ 0.01
SPTLC1-207ENST00000488921 TCHPQ9BT92 498 aa15.14■□□□□ 0.01
SPTLC1-207ENST00000488921 TARS2Q9BW92 718 aaKnown RBP15.14■□□□□ 0.01
SPTLC1-207ENST00000488921 GPR62Q9BZJ7 368 aa15.14■□□□□ 0.01
SPTLC1-207ENST00000488921 PTPRHQ9HD43 1115 aa15.14■□□□□ 0.01
SPTLC1-207ENST00000488921 MAN1C1Q9NR34 630 aa15.14■□□□□ 0.01
SPTLC1-207ENST00000488921 TSHZ2Q9NRE2 1034 aa15.14■□□□□ 0.01
SPTLC1-207ENST00000488921 SLC38A7Q9NVC3 462 aa15.14■□□□□ 0.01
SPTLC1-207ENST00000488921 SFI1A8K8P3 1242 aa15.13■□□□□ 0.01
SPTLC1-207ENST00000488921 TMEM189-UBE2V1I3L0A0 370 aa15.13■□□□□ 0.01
SPTLC1-207ENST00000488921 TOM1L1O75674 476 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms