RNA–Protein interactions for RNA: ENST00000488571.1

SNU13-208, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 5

Gene SNU13, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-208ENST00000488571 CSRNP2Q9H175 543 aa12.64□□□□□ -0.39
SNU13-208ENST00000488571 NXF3Q9H4D5 531 aaKnown RBP12.64□□□□□ -0.39
SNU13-208ENST00000488571 PLEKHA4Q9H4M7 779 aa12.64□□□□□ -0.39
SNU13-208ENST00000488571 ZSWIM4Q9H7M6 989 aa12.64□□□□□ -0.39
SNU13-208ENST00000488571 TBC1D17Q9HA65 648 aa12.64□□□□□ -0.39
SNU13-208ENST00000488571 DPP7Q9UHL4 492 aa12.64□□□□□ -0.39
SNU13-208ENST00000488571 CA14Q9ULX7 337 aa12.64□□□□□ -0.39
SNU13-208ENST00000488571 CYP46A1Q9Y6A2 500 aa12.64□□□□□ -0.39
SNU13-208ENST00000488571 WDR87Q6ZQQ6 2873 aa12.63□□□□□ -0.39
SNU13-208ENST00000488571 DMXL1Q9Y485 3027 aa12.63□□□□□ -0.39
SNU13-208ENST00000488571 FANCMQ8IYD8 2048 aa12.63□□□□□ -0.39
SNU13-208ENST00000488571 DOCK6Q96HP0 2047 aa12.63□□□□□ -0.39
SNU13-208ENST00000488571 ANHXE9PGG2 379 aa12.63□□□□□ -0.39
SNU13-208ENST00000488571 B4GALT5O43286 388 aa12.63□□□□□ -0.39
SNU13-208ENST00000488571 TGM5O43548 720 aa12.63□□□□□ -0.39
SNU13-208ENST00000488571 SLITRK3O94933 977 aa12.63□□□□□ -0.39
SNU13-208ENST00000488571 C1RP00736 705 aa12.63□□□□□ -0.39
SNU13-208ENST00000488571 SRFP11831 508 aa12.63□□□□□ -0.39
SNU13-208ENST00000488571 LAMP2P13473 410 aa12.63□□□□□ -0.39
SNU13-208ENST00000488571 ARF4P18085 180 aaPredicted RBP12.63□□□□□ -0.39
SNU13-208ENST00000488571 ID4P47928 161 aa12.63□□□□□ -0.39
SNU13-208ENST00000488571 POU5F1BQ06416 359 aa12.63□□□□□ -0.39
SNU13-208ENST00000488571 CAPSQ13938 189 aa12.63□□□□□ -0.39
SNU13-208ENST00000488571 MXD4Q14582 209 aaPredicted RBP12.63□□□□□ -0.39
SNU13-208ENST00000488571 NCAPH2Q6IBW4 605 aa12.63□□□□□ -0.39
SNU13-208ENST00000488571 FUT10Q6P4F1 479 aa12.63□□□□□ -0.39
SNU13-208ENST00000488571 ELMSAN1Q6PJG2 1045 aa12.63□□□□□ -0.39
SNU13-208ENST00000488571 PIK3AP1Q6ZUJ8 805 aa12.63□□□□□ -0.39
SNU13-208ENST00000488571 ERMP1Q7Z2K6 904 aa12.63□□□□□ -0.39
SNU13-208ENST00000488571 GPR65Q8IYL9 337 aa12.63□□□□□ -0.39
SNU13-208ENST00000488571 ASAP3Q8TDY4 903 aa12.63□□□□□ -0.39
SNU13-208ENST00000488571 APOL6Q9BWW8 343 aa12.63□□□□□ -0.39
SNU13-208ENST00000488571 TM6SF1Q9BZW5 370 aa12.63□□□□□ -0.39
SNU13-208ENST00000488571 DLGAP2Q9P1A6 1054 aa12.63□□□□□ -0.39
SNU13-208ENST00000488571 GIT1Q9Y2X7 761 aa12.63□□□□□ -0.39
SNU13-208ENST00000488571 CACNA1AO00555 2505 aa12.62□□□□□ -0.39
SNU13-208ENST00000488571 COL4A3Q01955 1670 aa12.62□□□□□ -0.39
SNU13-208ENST00000488571 INO80B-WBP1J3KQ70 363 aa12.62□□□□□ -0.39
SNU13-208ENST00000488571 RPL17P18621 184 aaKnown RBP12.62□□□□□ -0.39
SNU13-208ENST00000488571 AKAP5P24588 427 aa12.62□□□□□ -0.39
SNU13-208ENST00000488571 ARL2P36404 184 aa12.62□□□□□ -0.39
SNU13-208ENST00000488571 SCRN1Q12765 414 aa12.62□□□□□ -0.39
SNU13-208ENST00000488571 HTR4Q13639 388 aa12.62□□□□□ -0.39
SNU13-208ENST00000488571 USP41Q3LFD5 358 aa12.62□□□□□ -0.39
SNU13-208ENST00000488571 DMRTA1Q5VZB9 504 aa12.62□□□□□ -0.39
SNU13-208ENST00000488571 CPLX2Q6PUV4 134 aaKnown RBP12.62□□□□□ -0.39
SNU13-208ENST00000488571 CDR2LQ86X02 465 aaPredicted RBP12.62□□□□□ -0.39
SNU13-208ENST00000488571 GLYCTKQ8IVS8 523 aa12.62□□□□□ -0.39
SNU13-208ENST00000488571 TPH2Q8IWU9 490 aa12.62□□□□□ -0.39
SNU13-208ENST00000488571 ST13P5Q8NFI4 369 aaPredicted RBP12.62□□□□□ -0.39
SNU13-208ENST00000488571 RABGGTAQ92696 567 aa12.62□□□□□ -0.39
SNU13-208ENST00000488571 NXPE3Q969Y0 559 aa12.62□□□□□ -0.39
SNU13-208ENST00000488571 HSD17B14Q9BPX1 270 aa12.62□□□□□ -0.39
SNU13-208ENST00000488571 PAAF1Q9BRP4 392 aa12.62□□□□□ -0.39
SNU13-208ENST00000488571 COLEC11Q9BWP8 271 aa12.62□□□□□ -0.39
SNU13-208ENST00000488571 PRKD2Q9BZL6 878 aa12.62□□□□□ -0.39
SNU13-208ENST00000488571 ZDHHC7Q9NXF8 308 aa12.62□□□□□ -0.39
SNU13-208ENST00000488571 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.62□□□□□ -0.39
SNU13-208ENST00000488571 FNIP2Q9P278 1114 aa12.62□□□□□ -0.39
SNU13-208ENST00000488571 CACNG4Q9UBN1 327 aa12.62□□□□□ -0.39
SNU13-208ENST00000488571 ADAM28Q9UKQ2 775 aa12.62□□□□□ -0.39
SNU13-208ENST00000488571 R4GN57 208 aa12.62□□□□□ -0.39
SNU13-208ENST00000488571 DNAH14Q0VDD8 3507 aa12.62□□□□□ -0.39
SNU13-208ENST00000488571 MYH15Q9Y2K3 1946 aa12.62□□□□□ -0.39
SNU13-208ENST00000488571 STK36Q9NRP7 1315 aa12.62□□□□□ -0.39
SNU13-208ENST00000488571 EP300Q09472 2414 aaPredicted RBP12.61□□□□□ -0.39
SNU13-208ENST00000488571 EPB41L2O43491 1005 aaKnown RBP12.61□□□□□ -0.39
SNU13-208ENST00000488571 NR1I2O75469 434 aa12.61□□□□□ -0.39
SNU13-208ENST00000488571 LYPLA2O95372 231 aa12.61□□□□□ -0.39
SNU13-208ENST00000488571 DCNP07585 359 aaKnown RBP12.61□□□□□ -0.39
SNU13-208ENST00000488571 GLRA2P23416 452 aa12.61□□□□□ -0.39
SNU13-208ENST00000488571 GRIK3Q13003 919 aa12.61□□□□□ -0.39
SNU13-208ENST00000488571 TFDP1Q14186 410 aa12.61□□□□□ -0.39
SNU13-208ENST00000488571 RTP2Q5QGT7 225 aa12.61□□□□□ -0.39
SNU13-208ENST00000488571 PHLDB3Q6NSJ2 640 aa12.61□□□□□ -0.39
SNU13-208ENST00000488571 PRSS55Q6UWB4 352 aaPredicted RBP12.61□□□□□ -0.39
SNU13-208ENST00000488571 GET4Q7L5D6 327 aaPredicted RBP12.61□□□□□ -0.39
SNU13-208ENST00000488571 RIN2Q8WYP3 895 aaPredicted RBP12.61□□□□□ -0.39
SNU13-208ENST00000488571 EIF2AK1Q9BQI3 630 aaKnown RBP12.61□□□□□ -0.39
SNU13-208ENST00000488571 NFKBIZQ9BYH8 718 aa12.61□□□□□ -0.39
SNU13-208ENST00000488571 PIDD1Q9HB75 910 aa12.61□□□□□ -0.39
SNU13-208ENST00000488571 ARHGEF3Q9NR81 526 aa12.61□□□□□ -0.39
SNU13-208ENST00000488571 SLC2A4RGQ9NR83 387 aa12.61□□□□□ -0.39
SNU13-208ENST00000488571 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.61□□□□□ -0.39
SNU13-208ENST00000488571 ZMYM2Q9UBW7 1377 aa12.6□□□□□ -0.39
SNU13-208ENST00000488571 A0A1B0GUA9 196 aa12.6□□□□□ -0.39
SNU13-208ENST00000488571 TK2O00142 265 aa12.6□□□□□ -0.39
SNU13-208ENST00000488571 MARCH6O60337 910 aa12.6□□□□□ -0.39
SNU13-208ENST00000488571 ZMYND10O75800 440 aa12.6□□□□□ -0.39
SNU13-208ENST00000488571 DGAT1O75907 488 aa12.6□□□□□ -0.39
SNU13-208ENST00000488571 CTDNEP1O95476 244 aa12.6□□□□□ -0.39
SNU13-208ENST00000488571 NPTXRO95502 500 aa12.6□□□□□ -0.39
SNU13-208ENST00000488571 LMNAP02545 664 aaKnown RBP12.6□□□□□ -0.39
SNU13-208ENST00000488571 GLULP15104 373 aa12.6□□□□□ -0.39
SNU13-208ENST00000488571 NCBP1Q09161 790 aaKnown RBP12.6□□□□□ -0.39
SNU13-208ENST00000488571 NR5A1Q13285 461 aa12.6□□□□□ -0.39
SNU13-208ENST00000488571 SPECC1Q5M775 1068 aa12.6□□□□□ -0.39
SNU13-208ENST00000488571 SLC27A1Q6PCB7 646 aa12.6□□□□□ -0.39
SNU13-208ENST00000488571 SLFN12Q8IYM2 578 aa12.6□□□□□ -0.39
SNU13-208ENST00000488571 FGF14Q92915 247 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms