RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 RAD51AP2Q09MP3 1159 aa12.46□□□□□ -0.41
NIPAL3-207ENST00000488155 GRIK3Q13003 919 aa12.46□□□□□ -0.41
NIPAL3-207ENST00000488155 NT5DC1Q5TFE4 455 aa12.46□□□□□ -0.41
NIPAL3-207ENST00000488155 FUT10Q6P4F1 479 aa12.46□□□□□ -0.41
NIPAL3-207ENST00000488155 PALB2Q86YC2 1186 aa12.46□□□□□ -0.41
NIPAL3-207ENST00000488155 NECTIN4Q96NY8 510 aa12.46□□□□□ -0.41
NIPAL3-207ENST00000488155 ADPGKQ9BRR6 497 aa12.46□□□□□ -0.41
NIPAL3-207ENST00000488155 MMTAG2Q9BU76 263 aaKnown RBP12.46□□□□□ -0.41
NIPAL3-207ENST00000488155 RUSC1Q9BVN2 902 aa12.46□□□□□ -0.41
NIPAL3-207ENST00000488155 MAN1C1Q9NR34 630 aa12.46□□□□□ -0.41
NIPAL3-207ENST00000488155 DNM3Q9UQ16 869 aa12.46□□□□□ -0.41
NIPAL3-207ENST00000488155 SMC3Q9UQE7 1217 aa12.46□□□□□ -0.41
NIPAL3-207ENST00000488155 NR2E1Q9Y466 385 aa12.46□□□□□ -0.41
NIPAL3-207ENST00000488155 NOTCH4Q99466 2003 aa12.45□□□□□ -0.42
NIPAL3-207ENST00000488155 TCHHQ07283 1943 aa12.45□□□□□ -0.42
NIPAL3-207ENST00000488155 VWA3AA6NCI4 1184 aa12.45□□□□□ -0.42
NIPAL3-207ENST00000488155 SFI1A8K8P3 1242 aa12.45□□□□□ -0.42
NIPAL3-207ENST00000488155 K7ERI5 159 aa12.45□□□□□ -0.42
NIPAL3-207ENST00000488155 PTGESO14684 152 aa12.45□□□□□ -0.42
NIPAL3-207ENST00000488155 ASGR2P07307 311 aa12.45□□□□□ -0.42
NIPAL3-207ENST00000488155 ADH1AP07327 375 aa12.45□□□□□ -0.42
NIPAL3-207ENST00000488155 OSTNP61366 133 aa12.45□□□□□ -0.42
NIPAL3-207ENST00000488155 PTPN21Q16825 1174 aa12.45□□□□□ -0.42
NIPAL3-207ENST00000488155 RILPL1Q5EBL4 403 aa12.45□□□□□ -0.42
NIPAL3-207ENST00000488155 GLRA4Q5JXX5 417 aa12.45□□□□□ -0.42
NIPAL3-207ENST00000488155 ATF7IP2Q5U623 682 aa12.45□□□□□ -0.42
NIPAL3-207ENST00000488155 KIAA0319Q5VV43 1072 aa12.45□□□□□ -0.42
NIPAL3-207ENST00000488155 RINT1Q6NUQ1 792 aa12.45□□□□□ -0.42
NIPAL3-207ENST00000488155 TDRD5Q8NAT2 981 aaKnown RBP12.45□□□□□ -0.42
NIPAL3-207ENST00000488155 KREMEN2Q8NCW0 462 aa12.45□□□□□ -0.42
NIPAL3-207ENST00000488155 RIN2Q8WYP3 895 aaPredicted RBP12.45□□□□□ -0.42
NIPAL3-207ENST00000488155 KIFAP3Q92845 792 aa12.45□□□□□ -0.42
NIPAL3-207ENST00000488155 SMOC2Q9H3U7 446 aa12.45□□□□□ -0.42
NIPAL3-207ENST00000488155 SFXN1Q9H9B4 322 aa12.45□□□□□ -0.42
NIPAL3-207ENST00000488155 LIMD1Q9UGP4 676 aa12.45□□□□□ -0.42
NIPAL3-207ENST00000488155 ADAM28Q9UKQ2 775 aa12.45□□□□□ -0.42
NIPAL3-207ENST00000488155 MYH15Q9Y2K3 1946 aa12.45□□□□□ -0.42
NIPAL3-207ENST00000488155 CCDC195A0A1B0GUA6 201 aa12.44□□□□□ -0.42
NIPAL3-207ENST00000488155 LAD1O00515 517 aa12.44□□□□□ -0.42
NIPAL3-207ENST00000488155 RFPL2O75678 378 aa12.44□□□□□ -0.42
NIPAL3-207ENST00000488155 GLUD1P00367 558 aa12.44□□□□□ -0.42
NIPAL3-207ENST00000488155 THP07101 528 aa12.44□□□□□ -0.42
NIPAL3-207ENST00000488155 PRPHP41219 470 aa12.44□□□□□ -0.42
NIPAL3-207ENST00000488155 NPTX2P47972 431 aa12.44□□□□□ -0.42
NIPAL3-207ENST00000488155 ATP2C1P98194 919 aaPredicted RBP12.44□□□□□ -0.42
NIPAL3-207ENST00000488155 DSG1Q02413 1049 aa12.44□□□□□ -0.42
NIPAL3-207ENST00000488155 SIGLEC14Q08ET2 396 aa12.44□□□□□ -0.42
NIPAL3-207ENST00000488155 TUSC3Q13454 348 aa12.44□□□□□ -0.42
NIPAL3-207ENST00000488155 HSP90AA2PQ14568 343 aaPredicted RBP12.44□□□□□ -0.42
NIPAL3-207ENST00000488155 USP41Q3LFD5 358 aa12.44□□□□□ -0.42
NIPAL3-207ENST00000488155 LARP1BQ659C4 914 aaKnown RBP12.44□□□□□ -0.42
NIPAL3-207ENST00000488155 PRSS55Q6UWB4 352 aaPredicted RBP12.44□□□□□ -0.42
NIPAL3-207ENST00000488155 GPR149Q86SP6 731 aa12.44□□□□□ -0.42
NIPAL3-207ENST00000488155 CEP57Q86XR8 500 aa12.44□□□□□ -0.42
NIPAL3-207ENST00000488155 RNF168Q8IYW5 571 aaPredicted RBP12.44□□□□□ -0.42
NIPAL3-207ENST00000488155 DAW1Q8N136 415 aa12.44□□□□□ -0.42
NIPAL3-207ENST00000488155 CEP120Q8N960 986 aa12.44□□□□□ -0.42
NIPAL3-207ENST00000488155 MFSD14AQ96MC6 490 aa12.44□□□□□ -0.42
NIPAL3-207ENST00000488155 PNMA5Q96PV4 448 aa12.44□□□□□ -0.42
NIPAL3-207ENST00000488155 STK39Q9UEW8 545 aa12.44□□□□□ -0.42
NIPAL3-207ENST00000488155 SSX2IPQ9Y2D8 614 aa12.44□□□□□ -0.42
NIPAL3-207ENST00000488155 STK24Q9Y6E0 443 aa12.44□□□□□ -0.42
NIPAL3-207ENST00000488155 SLC16A4O15374 487 aa12.43□□□□□ -0.42
NIPAL3-207ENST00000488155 KIF4AO95239 1232 aa12.43□□□□□ -0.42
NIPAL3-207ENST00000488155 EFEMP2O95967 443 aa12.43□□□□□ -0.42
NIPAL3-207ENST00000488155 PDGFBP01127 241 aaPredicted RBP12.43□□□□□ -0.42
NIPAL3-207ENST00000488155 HARSP12081 509 aaKnown RBP12.43□□□□□ -0.42
NIPAL3-207ENST00000488155 IGFBP6P24592 240 aaPredicted RBP12.43□□□□□ -0.42
NIPAL3-207ENST00000488155 EFNA5P52803 228 aa12.43□□□□□ -0.42
NIPAL3-207ENST00000488155 CACNB1Q02641 598 aaPredicted RBP12.43□□□□□ -0.42
NIPAL3-207ENST00000488155 DMP1Q13316 513 aaPredicted RBP12.43□□□□□ -0.42
NIPAL3-207ENST00000488155 DCAF4L1Q3SXM0 396 aa12.43□□□□□ -0.42
NIPAL3-207ENST00000488155 RTP2Q5QGT7 225 aa12.43□□□□□ -0.42
NIPAL3-207ENST00000488155 FAM171A1Q5VUB5 890 aa12.43□□□□□ -0.42
NIPAL3-207ENST00000488155 C1orf186Q6ZWK4 172 aa12.43□□□□□ -0.42
NIPAL3-207ENST00000488155 CDK5RAP3Q96JB5 506 aa12.43□□□□□ -0.42
NIPAL3-207ENST00000488155 TBC1D32Q96NH3 1257 aa12.43□□□□□ -0.42
NIPAL3-207ENST00000488155 TARS2Q9BW92 718 aaKnown RBP12.43□□□□□ -0.42
NIPAL3-207ENST00000488155 GOLGA2P5Q9HBQ8 144 aa12.43□□□□□ -0.42
NIPAL3-207ENST00000488155 RXFP1Q9HBX9 757 aa12.43□□□□□ -0.42
NIPAL3-207ENST00000488155 KMT5AQ9NQR1 393 aa12.43□□□□□ -0.42
NIPAL3-207ENST00000488155 CHST7Q9NS84 486 aa12.43□□□□□ -0.42
NIPAL3-207ENST00000488155 NPHP3-ACAD11A0A0J9YXS1 232 aa12.42□□□□□ -0.42
NIPAL3-207ENST00000488155 TGM5O43548 720 aa12.42□□□□□ -0.42
NIPAL3-207ENST00000488155 BRD1O95696 1058 aa12.42□□□□□ -0.42
NIPAL3-207ENST00000488155 MCM2P49736 904 aa12.42□□□□□ -0.42
NIPAL3-207ENST00000488155 MAPK7Q13164 816 aa12.42□□□□□ -0.42
NIPAL3-207ENST00000488155 DHX8Q14562 1220 aaKnown RBP12.42□□□□□ -0.42
NIPAL3-207ENST00000488155 ZNF568Q3ZCX4 644 aa12.42□□□□□ -0.42
NIPAL3-207ENST00000488155 IER5LQ5T953 404 aa12.42□□□□□ -0.42
NIPAL3-207ENST00000488155 CCDC149Q6ZUS6 474 aa12.42□□□□□ -0.42
NIPAL3-207ENST00000488155 TAS1R3Q7RTX0 852 aa12.42□□□□□ -0.42
NIPAL3-207ENST00000488155 SUGP1Q8IWZ8 645 aaKnown RBP12.42□□□□□ -0.42
NIPAL3-207ENST00000488155 ASIC4Q96FT7 647 aa12.42□□□□□ -0.42
NIPAL3-207ENST00000488155 ZBTB45Q96K62 511 aaPredicted RBP12.42□□□□□ -0.42
NIPAL3-207ENST00000488155 ACO2Q99798 780 aaKnown RBP12.42□□□□□ -0.42
NIPAL3-207ENST00000488155 TCHPQ9BT92 498 aa12.42□□□□□ -0.42
NIPAL3-207ENST00000488155 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.42□□□□□ -0.42
NIPAL3-207ENST00000488155 CACNA1HO95180 2353 aa12.42□□□□□ -0.42
NIPAL3-207ENST00000488155 SCN1AP35498 2009 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms