RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 ABI1Q8IZP0 508 aa18.76■□□□□ 0.59
SHROOM1-205ENST00000488072 ZNF507Q8TCN5 953 aa18.76■□□□□ 0.59
SHROOM1-205ENST00000488072 GPT2Q8TD30 523 aa18.76■□□□□ 0.59
SHROOM1-205ENST00000488072 BCL7CQ8WUZ0 217 aaPredicted RBP18.76■□□□□ 0.59
SHROOM1-205ENST00000488072 MYLIPQ8WY64 445 aa18.76■□□□□ 0.59
SHROOM1-205ENST00000488072 SAAL1Q96ER3 474 aa18.76■□□□□ 0.59
SHROOM1-205ENST00000488072 TGS1Q96RS0 853 aaKnown RBP18.76■□□□□ 0.59
SHROOM1-205ENST00000488072 ADPGKQ9BRR6 497 aa18.76■□□□□ 0.59
SHROOM1-205ENST00000488072 MTMR10Q9NXD2 777 aa18.76■□□□□ 0.59
SHROOM1-205ENST00000488072 KCNG1Q9UIX4 513 aa18.76■□□□□ 0.59
SHROOM1-205ENST00000488072 PCDHB13Q9Y5F0 798 aa18.76■□□□□ 0.59
SHROOM1-205ENST00000488072 PCDHA5Q9Y5H7 936 aa18.76■□□□□ 0.59
SHROOM1-205ENST00000488072 FNDC1Q4ZHG4 1894 aaPredicted RBP18.75■□□□□ 0.59
SHROOM1-205ENST00000488072 A0A0B4J269 797 aa18.75■□□□□ 0.59
SHROOM1-205ENST00000488072 CLIC2O15247 247 aa18.75■□□□□ 0.59
SHROOM1-205ENST00000488072 CLDN3O15551 220 aa18.75■□□□□ 0.59
SHROOM1-205ENST00000488072 TGFB1I1O43294 461 aa18.75■□□□□ 0.59
SHROOM1-205ENST00000488072 LPXNO60711 386 aa18.75■□□□□ 0.59
SHROOM1-205ENST00000488072 SKIP12755 728 aa18.75■□□□□ 0.59
SHROOM1-205ENST00000488072 GRM5P41594 1212 aa18.75■□□□□ 0.59
SHROOM1-205ENST00000488072 ACOT2P49753 483 aa18.75■□□□□ 0.59
SHROOM1-205ENST00000488072 WNT7BP56706 349 aa18.75■□□□□ 0.59
SHROOM1-205ENST00000488072 NOLC1Q14978 699 aaKnown RBP eCLIP18.75■□□□□ 0.59
SHROOM1-205ENST00000488072 DCAF4L1Q3SXM0 396 aa18.75■□□□□ 0.59
SHROOM1-205ENST00000488072 TIGD1Q96MW7 591 aa18.75■□□□□ 0.59
SHROOM1-205ENST00000488072 ZMAT2Q96NC0 199 aaKnown RBP18.75■□□□□ 0.59
SHROOM1-205ENST00000488072 CDX2Q99626 313 aaPredicted RBP18.75■□□□□ 0.59
SHROOM1-205ENST00000488072 PAAF1Q9BRP4 392 aa18.75■□□□□ 0.59
SHROOM1-205ENST00000488072 ALG13Q9NP73 1137 aaKnown RBP18.75■□□□□ 0.59
SHROOM1-205ENST00000488072 KINO60870 393 aaKnown RBP18.74■□□□□ 0.59
SHROOM1-205ENST00000488072 SLC34A2O95436 690 aa18.74■□□□□ 0.59
SHROOM1-205ENST00000488072 CXCL8P10145 99 aa18.74■□□□□ 0.59
SHROOM1-205ENST00000488072 DNAJB1P25685 340 aa18.74■□□□□ 0.59
SHROOM1-205ENST00000488072 BMPR1AP36894 532 aa18.74■□□□□ 0.59
SHROOM1-205ENST00000488072 SLC11A1P49279 550 aa18.74■□□□□ 0.59
SHROOM1-205ENST00000488072 SLC10A6Q3KNW5 377 aa18.74■□□□□ 0.59
SHROOM1-205ENST00000488072 SYCP3Q8IZU3 236 aa18.74■□□□□ 0.59
SHROOM1-205ENST00000488072 COLGALT1Q8NBJ5 622 aa18.74■□□□□ 0.59
SHROOM1-205ENST00000488072 CLP1Q92989 425 aaKnown RBP18.74■□□□□ 0.59
SHROOM1-205ENST00000488072 MSTO1Q9BUK6 570 aa18.74■□□□□ 0.59
SHROOM1-205ENST00000488072 GIT1Q9Y2X7 761 aa18.74■□□□□ 0.59
SHROOM1-205ENST00000488072 PCDHGC5Q9Y5F6 944 aa18.74■□□□□ 0.59
SHROOM1-205ENST00000488072 TULP1O00294 542 aaPredicted RBP18.73■□□□□ 0.59
SHROOM1-205ENST00000488072 BIN1O00499 593 aa18.73■□□□□ 0.59
SHROOM1-205ENST00000488072 GRM6O15303 877 aa18.73■□□□□ 0.59
SHROOM1-205ENST00000488072 HOXA2O43364 376 aa18.73■□□□□ 0.59
SHROOM1-205ENST00000488072 ZC3H11AO75152 810 aaKnown RBP eCLIP18.73■□□□□ 0.59
SHROOM1-205ENST00000488072 RHOBTB3O94955 611 aa18.73■□□□□ 0.59
SHROOM1-205ENST00000488072 SOX4Q06945 474 aaPredicted RBP18.73■□□□□ 0.59
SHROOM1-205ENST00000488072 SCARA3Q6AZY7 606 aa18.73■□□□□ 0.59
SHROOM1-205ENST00000488072 CRELD2Q6UXH1 353 aaPredicted RBP18.73■□□□□ 0.59
SHROOM1-205ENST00000488072 LRRC43Q8N309 656 aa18.73■□□□□ 0.59
SHROOM1-205ENST00000488072 KLHL23Q8NBE8 558 aa18.73■□□□□ 0.59
SHROOM1-205ENST00000488072 NOC3LQ8WTT2 800 aaKnown RBP18.73■□□□□ 0.59
SHROOM1-205ENST00000488072 HVCN1Q96D96 273 aa18.73■□□□□ 0.59
SHROOM1-205ENST00000488072 GBP4Q96PP9 640 aa18.73■□□□□ 0.59
SHROOM1-205ENST00000488072 GOLGA2P5Q9HBQ8 144 aa18.73■□□□□ 0.59
SHROOM1-205ENST00000488072 MAN1B1Q9UKM7 699 aa18.73■□□□□ 0.59
SHROOM1-205ENST00000488072 STYXL1Q9Y6J8 313 aa18.73■□□□□ 0.59
SHROOM1-205ENST00000488072 ITGB1P05556 798 aa18.72■□□□□ 0.59
SHROOM1-205ENST00000488072 BMP6P22004 513 aa18.72■□□□□ 0.59
SHROOM1-205ENST00000488072 GUCY2FP51841 1108 aa18.72■□□□□ 0.59
SHROOM1-205ENST00000488072 BCAR1P56945 870 aa18.72■□□□□ 0.59
SHROOM1-205ENST00000488072 GPM6BQ13491 265 aa18.72■□□□□ 0.59
SHROOM1-205ENST00000488072 NAB2Q15742 525 aa18.72■□□□□ 0.59
SHROOM1-205ENST00000488072 ENOX2Q16206 610 aaKnown RBP18.72■□□□□ 0.59
SHROOM1-205ENST00000488072 KANK3Q6NY19 840 aa18.72■□□□□ 0.59
SHROOM1-205ENST00000488072 ALKAL1Q6UXT8 129 aa18.72■□□□□ 0.59
SHROOM1-205ENST00000488072 SLC17A8Q8NDX2 589 aa18.72■□□□□ 0.59
SHROOM1-205ENST00000488072 FBXO22Q8NEZ5 403 aa18.72■□□□□ 0.59
SHROOM1-205ENST00000488072 POMGNT1Q8WZA1 660 aa18.72■□□□□ 0.59
SHROOM1-205ENST00000488072 C18orf25Q96B23 403 aaPredicted RBP18.72■□□□□ 0.59
SHROOM1-205ENST00000488072 FAM212AQ96EL1 285 aa18.72■□□□□ 0.59
SHROOM1-205ENST00000488072 SNX27Q96L92 541 aa18.72■□□□□ 0.59
SHROOM1-205ENST00000488072 ACAP3Q96P50 834 aa18.72■□□□□ 0.59
SHROOM1-205ENST00000488072 PRG3Q9Y2Y8 225 aaPredicted RBP18.72■□□□□ 0.59
SHROOM1-205ENST00000488072 CASTOR2A6NHX0 329 aa18.71■□□□□ 0.59
SHROOM1-205ENST00000488072 LACTBL1A8MY62 500 aa18.71■□□□□ 0.59
SHROOM1-205ENST00000488072 OGTO15294 1046 aa18.71■□□□□ 0.59
SHROOM1-205ENST00000488072 INPPL1O15357 1258 aa18.71■□□□□ 0.59
SHROOM1-205ENST00000488072 EIF3DO15371 548 aaKnown RBP eCLIP18.71■□□□□ 0.59
SHROOM1-205ENST00000488072 GALTP07902 379 aa18.71■□□□□ 0.59
SHROOM1-205ENST00000488072 RNASELQ05823 741 aaKnown RBP18.71■□□□□ 0.59
SHROOM1-205ENST00000488072 CAMK1Q14012 370 aa18.71■□□□□ 0.59
SHROOM1-205ENST00000488072 BMT2Q1RMZ1 405 aa18.71■□□□□ 0.59
SHROOM1-205ENST00000488072 KCNT2Q6UVM3 1135 aa18.71■□□□□ 0.59
SHROOM1-205ENST00000488072 FAM43BQ6ZT52 329 aaPredicted RBP18.71■□□□□ 0.59
SHROOM1-205ENST00000488072 COLGALT2Q8IYK4 626 aa18.71■□□□□ 0.59
SHROOM1-205ENST00000488072 SPATA20Q8TB22 786 aa18.71■□□□□ 0.59
SHROOM1-205ENST00000488072 URGCPQ8TCY9 931 aa18.71■□□□□ 0.59
SHROOM1-205ENST00000488072 FAM213AQ9BRX8 229 aa18.71■□□□□ 0.59
SHROOM1-205ENST00000488072 CCDC94Q9BW85 323 aaPredicted RBP18.71■□□□□ 0.59
SHROOM1-205ENST00000488072 VN1R3Q9BXE9 311 aa18.71■□□□□ 0.59
SHROOM1-205ENST00000488072 AGPAT3Q9NRZ7 376 aa18.71■□□□□ 0.59
SHROOM1-205ENST00000488072 CPSF3Q9UKF6 684 aaKnown RBP18.71■□□□□ 0.59
SHROOM1-205ENST00000488072 AGO2Q9UKV8 859 aaKnown RBP18.71■□□□□ 0.59
SHROOM1-205ENST00000488072 KIAA1671Q9BY89 1806 aa18.71■□□□□ 0.59
SHROOM1-205ENST00000488072 CHD7Q9P2D1 2997 aa18.71■□□□□ 0.59
SHROOM1-205ENST00000488072 SMIM28A0A1B0GU29 152 aa18.7■□□□□ 0.58
SHROOM1-205ENST00000488072 MYL1P05976 194 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms