RNA–Protein interactions for RNA: ENST00000488023.1

HFM1-208, Transcript of HFM1, ATP dependent DNA helicase homolog, human

TSL 5

Gene HFM1, Length 1,699 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HFM1-208	ENST00000488023	POLG2	Q9UHN1	485 aa		4.28	□□□□□ -1.72
HFM1-208	ENST00000488023	MSRA	Q9UJ68	235 aa		4.28	□□□□□ -1.72
HFM1-208	ENST00000488023	PCDHGB2	Q9Y5G2	931 aa		4.28	□□□□□ -1.72
HFM1-208	ENST00000488023	LRRFIP2	Q9Y608	721 aa	Known RBP	4.28	□□□□□ -1.72
HFM1-208	ENST00000488023	RHPN2P1	A8MT19	583 aa		4.27	□□□□□ -1.73
HFM1-208	ENST00000488023	SCD	O00767	359 aa		4.27	□□□□□ -1.73
HFM1-208	ENST00000488023	COL6A2	P12110	1019 aa		4.27	□□□□□ -1.73
HFM1-208	ENST00000488023	HSD3B1	P14060	373 aa		4.27	□□□□□ -1.73
HFM1-208	ENST00000488023	CASP5	P51878	434 aa		4.27	□□□□□ -1.73
HFM1-208	ENST00000488023	CACNB3	P54284	484 aa		4.27	□□□□□ -1.73
HFM1-208	ENST00000488023	TBX2	Q13207	712 aa	Predicted RBP	4.27	□□□□□ -1.73
HFM1-208	ENST00000488023	G3BP1	Q13283	466 aa	Known RBP eCLIP	4.27	□□□□□ -1.73
HFM1-208	ENST00000488023	ANO6	Q4KMQ2	910 aa		4.27	□□□□□ -1.73
HFM1-208	ENST00000488023	MCTP2	Q6DN12	878 aa		4.27	□□□□□ -1.73
HFM1-208	ENST00000488023	C16orf54	Q6UWD8	224 aa		4.27	□□□□□ -1.73
HFM1-208	ENST00000488023	LMBR1L	Q6UX01	489 aa		4.27	□□□□□ -1.73
HFM1-208	ENST00000488023	ARHGAP36	Q6ZRI8	547 aa		4.27	□□□□□ -1.73
HFM1-208	ENST00000488023	C1orf122	Q6ZSJ8	110 aa		4.27	□□□□□ -1.73
HFM1-208	ENST00000488023	FAM124A	Q86V42	546 aa		4.27	□□□□□ -1.73
HFM1-208	ENST00000488023	ZNF575	Q86XF7	245 aa		4.27	□□□□□ -1.73
HFM1-208	ENST00000488023	NOSTRIN	Q8IVI9	506 aa		4.27	□□□□□ -1.73
HFM1-208	ENST00000488023	THEMIS	Q8N1K5	641 aa	Predicted RBP	4.27	□□□□□ -1.73
HFM1-208	ENST00000488023	FAM26E	Q8N5C1	309 aa		4.27	□□□□□ -1.73
HFM1-208	ENST00000488023	LRTOMT	Q8WZ04	291 aa		4.27	□□□□□ -1.73
HFM1-208	ENST00000488023	TOE1	Q96GM8	510 aa	Known RBP	4.27	□□□□□ -1.73
HFM1-208	ENST00000488023	NT5C1B	Q96P26	610 aa		4.27	□□□□□ -1.73
HFM1-208	ENST00000488023	ACAP3	Q96P50	834 aa		4.27	□□□□□ -1.73
HFM1-208	ENST00000488023	CGRRF1	Q99675	332 aa		4.27	□□□□□ -1.73
HFM1-208	ENST00000488023	ZNF747	Q9BV97	191 aa		4.27	□□□□□ -1.73
HFM1-208	ENST00000488023	SLC6A20	Q9NP91	592 aa		4.27	□□□□□ -1.73
HFM1-208	ENST00000488023	DTL	Q9NZJ0	730 aa		4.27	□□□□□ -1.73
HFM1-208	ENST00000488023	TELO2	Q9Y4R8	837 aa		4.27	□□□□□ -1.73
HFM1-208	ENST00000488023	SETD1B	Q9UPS6	1966 aa	Known RBP	4.27	□□□□□ -1.73
HFM1-208	ENST00000488023	TCRBV5S2	A0A599	114 aa		4.26	□□□□□ -1.73
HFM1-208	ENST00000488023	CAPN8	A6NHC0	703 aa		4.26	□□□□□ -1.73
HFM1-208	ENST00000488023	EYA2	O00167	538 aa		4.26	□□□□□ -1.73
HFM1-208	ENST00000488023	KRIT1	O00522	736 aa		4.26	□□□□□ -1.73
HFM1-208	ENST00000488023	NCAM2	O15394	837 aa		4.26	□□□□□ -1.73
HFM1-208	ENST00000488023	FIBP	O43427	364 aa		4.26	□□□□□ -1.73
HFM1-208	ENST00000488023	LPL	P06858	475 aa		4.26	□□□□□ -1.73
HFM1-208	ENST00000488023	STAT5A	P42229	794 aa		4.26	□□□□□ -1.73
HFM1-208	ENST00000488023	AGFG1	P52594	562 aa	Known RBP	4.26	□□□□□ -1.73
HFM1-208	ENST00000488023	MAPK10	P53779	464 aa		4.26	□□□□□ -1.73
HFM1-208	ENST00000488023	ITGA1	P56199	1179 aa		4.26	□□□□□ -1.73
HFM1-208	ENST00000488023	PPFIA1	Q13136	1202 aa		4.26	□□□□□ -1.73
HFM1-208	ENST00000488023	SEC23A	Q15436	765 aa		4.26	□□□□□ -1.73
HFM1-208	ENST00000488023	DGKK	Q5KSL6	1271 aa		4.26	□□□□□ -1.73
HFM1-208	ENST00000488023	GGT6	Q6P531	493 aa		4.26	□□□□□ -1.73
HFM1-208	ENST00000488023	DPP9	Q86TI2	863 aa		4.26	□□□□□ -1.73
HFM1-208	ENST00000488023	CXorf67	Q86X51	503 aa	Predicted RBP	4.26	□□□□□ -1.73
HFM1-208	ENST00000488023	LIX1L	Q8IVB5	337 aa		4.26	□□□□□ -1.73
HFM1-208	ENST00000488023	TXNDC5	Q8NBS9	432 aa	Known RBP	4.26	□□□□□ -1.73
HFM1-208	ENST00000488023	NAXE	Q8NCW5	288 aa		4.26	□□□□□ -1.73
HFM1-208	ENST00000488023	UHMK1	Q8TAS1	419 aa	Known RBP	4.26	□□□□□ -1.73
HFM1-208	ENST00000488023	PIP4K2C	Q8TBX8	421 aa		4.26	□□□□□ -1.73
HFM1-208	ENST00000488023	CDK5RAP3	Q96JB5	506 aa		4.26	□□□□□ -1.73
HFM1-208	ENST00000488023	OSBPL5	Q9H0X9	879 aa	Predicted RBP	4.26	□□□□□ -1.73
HFM1-208	ENST00000488023	PRDM12	Q9H4Q4	367 aa		4.26	□□□□□ -1.73
HFM1-208	ENST00000488023	ITM2C	Q9NQX7	267 aa		4.26	□□□□□ -1.73
HFM1-208	ENST00000488023	VPS45	Q9NRW7	570 aa		4.26	□□□□□ -1.73
HFM1-208	ENST00000488023	ASAP1	Q9ULH1	1129 aa		4.26	□□□□□ -1.73
HFM1-208	ENST00000488023	LIMCH1	Q9UPQ0	1083 aa		4.26	□□□□□ -1.73
HFM1-208	ENST00000488023	SLC45A1	Q9Y2W3	748 aa		4.26	□□□□□ -1.73
HFM1-208	ENST00000488023		A0A1B0GVC2	190 aa		4.26	□□□□□ -1.73
HFM1-208	ENST00000488023	RRN3P2	A6NIE6	340 aa		4.26	□□□□□ -1.73
HFM1-208	ENST00000488023	MAN2B1	O00754	1011 aa		4.26	□□□□□ -1.73
HFM1-208	ENST00000488023	CYP7B1	O75881	506 aa		4.26	□□□□□ -1.73
HFM1-208	ENST00000488023	MBD4	O95243	580 aa		4.26	□□□□□ -1.73
HFM1-208	ENST00000488023	EDNRB	P24530	442 aa		4.26	□□□□□ -1.73
HFM1-208	ENST00000488023	CD40	P25942	277 aa		4.26	□□□□□ -1.73
HFM1-208	ENST00000488023	RXRG	P48443	463 aa		4.26	□□□□□ -1.73
HFM1-208	ENST00000488023	EPHA5	P54756	1037 aa		4.26	□□□□□ -1.73
HFM1-208	ENST00000488023	KLF10	Q13118	480 aa		4.26	□□□□□ -1.73
HFM1-208	ENST00000488023	MOGS	Q13724	837 aa		4.26	□□□□□ -1.73
HFM1-208	ENST00000488023	GPR19	Q15760	415 aa		4.26	□□□□□ -1.73
HFM1-208	ENST00000488023	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	4.26	□□□□□ -1.73
HFM1-208	ENST00000488023	CR1L	Q2VPA4	569 aa		4.26	□□□□□ -1.73
HFM1-208	ENST00000488023	PITRM1	Q5JRX3	1037 aa		4.26	□□□□□ -1.73
HFM1-208	ENST00000488023	IZUMO3	Q5VZ72	239 aa		4.26	□□□□□ -1.73
HFM1-208	ENST00000488023	CCDC62	Q6P9F0	684 aa		4.26	□□□□□ -1.73
HFM1-208	ENST00000488023	APOA5	Q6Q788	366 aa		4.26	□□□□□ -1.73
HFM1-208	ENST00000488023	PDZD4	Q76G19	769 aa	Predicted RBP	4.26	□□□□□ -1.73
HFM1-208	ENST00000488023	TRIM48	Q8IWZ4	208 aa		4.26	□□□□□ -1.73
HFM1-208	ENST00000488023	SSH1	Q8WYL5	1049 aa		4.26	□□□□□ -1.73
HFM1-208	ENST00000488023	PHKB	Q93100	1093 aa		4.26	□□□□□ -1.73
HFM1-208	ENST00000488023	UBXN10	Q96LJ8	280 aa		4.26	□□□□□ -1.73
HFM1-208	ENST00000488023	PPM1M	Q96MI6	270 aa		4.26	□□□□□ -1.73
HFM1-208	ENST00000488023	WRNIP1	Q96S55	665 aa		4.26	□□□□□ -1.73
HFM1-208	ENST00000488023	HSPBP1	Q9NZL4	362 aa		4.26	□□□□□ -1.73
HFM1-208	ENST00000488023	MYOT	Q9UBF9	498 aa		4.26	□□□□□ -1.73
HFM1-208	ENST00000488023	TPCN1	Q9ULQ1	816 aa		4.26	□□□□□ -1.73
HFM1-208	ENST00000488023	NUB1	Q9Y5A7	615 aa		4.26	□□□□□ -1.73
HFM1-208	ENST00000488023	TNFRSF18	Q9Y5U5	241 aa		4.26	□□□□□ -1.73
HFM1-208	ENST00000488023	CCDC154	A6NI56	674 aa		4.25	□□□□□ -1.73
HFM1-208	ENST00000488023	MGEA5	O60502	916 aa		4.25	□□□□□ -1.73
HFM1-208	ENST00000488023	CD4	P01730	458 aa		4.25	□□□□□ -1.73
HFM1-208	ENST00000488023	GNAT1	P11488	350 aa		4.25	□□□□□ -1.73
HFM1-208	ENST00000488023	SMARCA1	P28370	1054 aa		4.25	□□□□□ -1.73
HFM1-208	ENST00000488023	COPB2	P35606	906 aa		4.25	□□□□□ -1.73
HFM1-208	ENST00000488023	STT3A	P46977	705 aa		4.25	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms