RNA–Protein interactions for RNA: ENST00000487894.5

HMG20B-212, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 1,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-212ENST00000487894 GDAQ9Y2T3 454 aa18.7■□□□□ 0.58
HMG20B-212ENST00000487894 C5orf42Q9H799 3197 aa18.69■□□□□ 0.58
HMG20B-212ENST00000487894 LINC01565O15544 149 aa18.69■□□□□ 0.58
HMG20B-212ENST00000487894 TRAK2O60296 914 aa18.69■□□□□ 0.58
HMG20B-212ENST00000487894 MCF2P10911 925 aa18.69■□□□□ 0.58
HMG20B-212ENST00000487894 KCNA5P22460 613 aa18.69■□□□□ 0.58
HMG20B-212ENST00000487894 GRM5P41594 1212 aa18.69■□□□□ 0.58
HMG20B-212ENST00000487894 NRIP1P48552 1158 aa18.69■□□□□ 0.58
HMG20B-212ENST00000487894 AAK1Q2M2I8 961 aa18.69■□□□□ 0.58
HMG20B-212ENST00000487894 ZBTB33Q86T24 672 aa18.69■□□□□ 0.58
HMG20B-212ENST00000487894 DDX53Q86TM3 631 aaKnown RBP18.69■□□□□ 0.58
HMG20B-212ENST00000487894 FAM178BQ8IXR5 827 aa18.69■□□□□ 0.58
HMG20B-212ENST00000487894 MICAL1Q8TDZ2 1067 aa18.69■□□□□ 0.58
HMG20B-212ENST00000487894 ZBTB45Q96K62 511 aaPredicted RBP18.69■□□□□ 0.58
HMG20B-212ENST00000487894 ZBP1Q9H171 429 aa18.69■□□□□ 0.58
HMG20B-212ENST00000487894 IGFLR1Q9H665 355 aa18.69■□□□□ 0.58
HMG20B-212ENST00000487894 RCOR1Q9UKL0 485 aa18.69■□□□□ 0.58
HMG20B-212ENST00000487894 FAN1Q9Y2M0 1017 aa18.69■□□□□ 0.58
HMG20B-212ENST00000487894 PRG3Q9Y2Y8 225 aaPredicted RBP18.69■□□□□ 0.58
HMG20B-212ENST00000487894 HIDE1A8MVS5 230 aa18.68■□□□□ 0.58
HMG20B-212ENST00000487894 NCK2O43639 380 aa18.68■□□□□ 0.58
HMG20B-212ENST00000487894 TBX10O75333 385 aa18.68■□□□□ 0.58
HMG20B-212ENST00000487894 TOM1L1O75674 476 aa18.68■□□□□ 0.58
HMG20B-212ENST00000487894 SCP2P22307 547 aa18.68■□□□□ 0.58
HMG20B-212ENST00000487894 NMT1P30419 496 aaKnown RBP18.68■□□□□ 0.58
HMG20B-212ENST00000487894 LTBRP36941 435 aa18.68■□□□□ 0.58
HMG20B-212ENST00000487894 OR1G1P47890 313 aa18.68■□□□□ 0.58
HMG20B-212ENST00000487894 ME1P48163 572 aa18.68■□□□□ 0.58
HMG20B-212ENST00000487894 NOLC1Q14978 699 aaKnown RBP eCLIP18.68■□□□□ 0.58
HMG20B-212ENST00000487894 NAB2Q15742 525 aa18.68■□□□□ 0.58
HMG20B-212ENST00000487894 ZPBP2Q6X784 338 aa18.68■□□□□ 0.58
HMG20B-212ENST00000487894 TMC7Q7Z402 723 aa18.68■□□□□ 0.58
HMG20B-212ENST00000487894 RBM23Q86U06 439 aaKnown RBP18.68■□□□□ 0.58
HMG20B-212ENST00000487894 SFR1Q86XK3 245 aa18.68■□□□□ 0.58
HMG20B-212ENST00000487894 VPS52Q8N1B4 723 aa18.68■□□□□ 0.58
HMG20B-212ENST00000487894 EFHBQ8N7U6 833 aa18.68■□□□□ 0.58
HMG20B-212ENST00000487894 NGRNQ9NPE2 291 aaKnown RBP18.68■□□□□ 0.58
HMG20B-212ENST00000487894 ANKFY1Q9P2R3 1169 aa18.68■□□□□ 0.58
HMG20B-212ENST00000487894 TBX20Q9UMR3 447 aa18.68■□□□□ 0.58
HMG20B-212ENST00000487894 F8W810 466 aa18.67■□□□□ 0.58
HMG20B-212ENST00000487894 GLP2RO95838 553 aa18.67■□□□□ 0.58
HMG20B-212ENST00000487894 PIGRP01833 764 aa18.67■□□□□ 0.58
HMG20B-212ENST00000487894 ALDH2P05091 517 aa18.67■□□□□ 0.58
HMG20B-212ENST00000487894 HARSP12081 509 aaKnown RBP18.67■□□□□ 0.58
HMG20B-212ENST00000487894 DLX2Q07687 328 aaPredicted RBP18.67■□□□□ 0.58
HMG20B-212ENST00000487894 ADAM15Q13444 863 aa18.67■□□□□ 0.58
HMG20B-212ENST00000487894 SMC1AQ14683 1233 aaKnown RBP18.67■□□□□ 0.58
HMG20B-212ENST00000487894 DUSP6Q16828 381 aa18.67■□□□□ 0.58
HMG20B-212ENST00000487894 LEXMQ3ZCV2 418 aa18.67■□□□□ 0.58
HMG20B-212ENST00000487894 RESP18Q5W5W9 173 aa18.67■□□□□ 0.58
HMG20B-212ENST00000487894 EP400NLQ6ZTU2 488 aa18.67■□□□□ 0.58
HMG20B-212ENST00000487894 CCDC94Q9BW85 323 aaPredicted RBP18.67■□□□□ 0.58
HMG20B-212ENST00000487894 COL25A1Q9BXS0 654 aaPredicted RBP18.67■□□□□ 0.58
HMG20B-212ENST00000487894 HAPLN2Q9GZV7 340 aa18.67■□□□□ 0.58
HMG20B-212ENST00000487894 ST6GALNAC4Q9H4F1 302 aa18.67■□□□□ 0.58
HMG20B-212ENST00000487894 TLE6Q9H808 572 aa18.67■□□□□ 0.58
HMG20B-212ENST00000487894 CACNG4Q9UBN1 327 aa18.67■□□□□ 0.58
HMG20B-212ENST00000487894 TTC28Q96AY4 2481 aa18.67■□□□□ 0.58
HMG20B-212ENST00000487894 FRMD3A2A2Y4 597 aa18.66■□□□□ 0.58
HMG20B-212ENST00000487894 C2orf71A6NGG8 1288 aa18.66■□□□□ 0.58
HMG20B-212ENST00000487894 H3BQ06 376 aaPredicted RBP18.66■□□□□ 0.58
HMG20B-212ENST00000487894 PER2O15055 1255 aa18.66■□□□□ 0.58
HMG20B-212ENST00000487894 EFEMP2O95967 443 aa18.66■□□□□ 0.58
HMG20B-212ENST00000487894 CTSAP10619 480 aa18.66■□□□□ 0.58
HMG20B-212ENST00000487894 BMP1P13497 986 aa18.66■□□□□ 0.58
HMG20B-212ENST00000487894 PRKCSHP14314 528 aaPredicted RBP18.66■□□□□ 0.58
HMG20B-212ENST00000487894 OSTNP61366 133 aa18.66■□□□□ 0.58
HMG20B-212ENST00000487894 KRT85P78386 507 aa18.66■□□□□ 0.58
HMG20B-212ENST00000487894 GTF2BQ00403 316 aa18.66■□□□□ 0.58
HMG20B-212ENST00000487894 MCL1Q07820 350 aa18.66■□□□□ 0.58
HMG20B-212ENST00000487894 TUSC3Q13454 348 aa18.66■□□□□ 0.58
HMG20B-212ENST00000487894 MAP4K3Q8IVH8 894 aa18.66■□□□□ 0.58
HMG20B-212ENST00000487894 RNF168Q8IYW5 571 aaPredicted RBP18.66■□□□□ 0.58
HMG20B-212ENST00000487894 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.66■□□□□ 0.58
HMG20B-212ENST00000487894 LEO1Q8WVC0 666 aaPredicted RBP18.66■□□□□ 0.58
HMG20B-212ENST00000487894 AUTS2Q8WXX7 1259 aa18.66■□□□□ 0.58
HMG20B-212ENST00000487894 STAMQ92783 540 aa18.66■□□□□ 0.58
HMG20B-212ENST00000487894 DHX58Q96C10 678 aa18.66■□□□□ 0.58
HMG20B-212ENST00000487894 BICD1Q96G01 975 aa18.66■□□□□ 0.58
HMG20B-212ENST00000487894 CDCA3Q99618 268 aaPredicted RBP18.66■□□□□ 0.58
HMG20B-212ENST00000487894 TCHPQ9BT92 498 aa18.66■□□□□ 0.58
HMG20B-212ENST00000487894 TNMDQ9H2S6 317 aa18.66■□□□□ 0.58
HMG20B-212ENST00000487894 CUEDC2Q9H467 287 aa18.66■□□□□ 0.58
HMG20B-212ENST00000487894 KBTBD4Q9NVX7 518 aa18.66■□□□□ 0.58
HMG20B-212ENST00000487894 SEL1LQ9UBV2 794 aa18.66■□□□□ 0.58
HMG20B-212ENST00000487894 BDP1A6H8Y1 2624 aa18.66■□□□□ 0.58
HMG20B-212ENST00000487894 MUC3AQ02505 3323 aa18.66■□□□□ 0.58
HMG20B-212ENST00000487894 MTCL1Q9Y4B5 1905 aaKnown RBP18.65■□□□□ 0.58
HMG20B-212ENST00000487894 HNRNPDLO14979 420 aaKnown RBP18.65■□□□□ 0.58
HMG20B-212ENST00000487894 MEFVO15553 781 aaPredicted RBP18.65■□□□□ 0.58
HMG20B-212ENST00000487894 PPP1R37O75864 691 aa18.65■□□□□ 0.58
HMG20B-212ENST00000487894 THP07101 528 aa18.65■□□□□ 0.58
HMG20B-212ENST00000487894 GAP43P17677 238 aa18.65■□□□□ 0.58
HMG20B-212ENST00000487894 ZC2HC1CQ53FD0 456 aaPredicted RBP18.65■□□□□ 0.58
HMG20B-212ENST00000487894 XKR4Q5GH76 650 aa18.65■□□□□ 0.58
HMG20B-212ENST00000487894 GLRA4Q5JXX5 417 aa18.65■□□□□ 0.58
HMG20B-212ENST00000487894 SLC39A4Q6P5W5 647 aa18.65■□□□□ 0.58
HMG20B-212ENST00000487894 MRPL43Q8N983 215 aaKnown RBP18.65■□□□□ 0.58
HMG20B-212ENST00000487894 VN1R2Q8NFZ6 395 aa18.65■□□□□ 0.58
HMG20B-212ENST00000487894 SNX27Q96L92 541 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms