RNA–Protein interactions for RNA: ENST00000487481.1

NME1-208, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 2

Gene NME1, Length 987 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-208ENST00000487481 ZMYM2Q9UBW7 1377 aa16.98■□□□□ 0.31
NME1-208ENST00000487481 CCL16O15467 120 aa16.97■□□□□ 0.31
NME1-208ENST00000487481 TSPAN1O60635 241 aa16.97■□□□□ 0.31
NME1-208ENST00000487481 ECI2O75521 394 aa16.97■□□□□ 0.31
NME1-208ENST00000487481 RFC5P40937 340 aa16.97■□□□□ 0.31
NME1-208ENST00000487481 DMWDQ09019 674 aa16.97■□□□□ 0.31
NME1-208ENST00000487481 GRIK3Q13003 919 aa16.97■□□□□ 0.31
NME1-208ENST00000487481 FZD5Q13467 585 aa16.97■□□□□ 0.31
NME1-208ENST00000487481 RTP2Q5QGT7 225 aa16.97■□□□□ 0.31
NME1-208ENST00000487481 PRSS55Q6UWB4 352 aaPredicted RBP16.97■□□□□ 0.31
NME1-208ENST00000487481 MAMSTRQ6ZN01 415 aa16.97■□□□□ 0.31
NME1-208ENST00000487481 RNF149Q8NC42 400 aa16.97■□□□□ 0.31
NME1-208ENST00000487481 PIK3R5Q8WYR1 880 aa16.97■□□□□ 0.31
NME1-208ENST00000487481 DDX1Q92499 740 aaKnown RBP16.97■□□□□ 0.31
NME1-208ENST00000487481 TMEM143Q96AN5 459 aa16.97■□□□□ 0.31
NME1-208ENST00000487481 ESYT1Q9BSJ8 1104 aa16.97■□□□□ 0.31
NME1-208ENST00000487481 CSRNP2Q9H175 543 aa16.97■□□□□ 0.31
NME1-208ENST00000487481 CHRDQ9H2X0 955 aa16.97■□□□□ 0.31
NME1-208ENST00000487481 NAP1L2Q9ULW6 460 aaPredicted RBP16.97■□□□□ 0.31
NME1-208ENST00000487481 ASAP2O43150 1006 aa16.96■□□□□ 0.31
NME1-208ENST00000487481 PRPF3O43395 683 aaKnown RBP16.96■□□□□ 0.31
NME1-208ENST00000487481 DKC1O60832 514 aaKnown RBP eCLIP16.96■□□□□ 0.31
NME1-208ENST00000487481 TADA2AO75478 443 aa16.96■□□□□ 0.31
NME1-208ENST00000487481 NPEPPSP55786 919 aa16.96■□□□□ 0.31
NME1-208ENST00000487481 NCBP1Q09161 790 aaKnown RBP16.96■□□□□ 0.31
NME1-208ENST00000487481 LPAL2Q16609 132 aa16.96■□□□□ 0.31
NME1-208ENST00000487481 PRR23CQ6ZRP0 262 aa16.96■□□□□ 0.31
NME1-208ENST00000487481 GSTCDQ8NEC7 633 aa16.96■□□□□ 0.31
NME1-208ENST00000487481 TCP11Q8WWU5 503 aa16.96■□□□□ 0.31
NME1-208ENST00000487481 DNASE1L2Q92874 299 aa16.96■□□□□ 0.31
NME1-208ENST00000487481 CEP170P1Q96L14 293 aa16.96■□□□□ 0.31
NME1-208ENST00000487481 CLSTN3Q9BQT9 956 aa16.96■□□□□ 0.31
NME1-208ENST00000487481 TTPALQ9BTX7 342 aa16.96■□□□□ 0.31
NME1-208ENST00000487481 APOL6Q9BWW8 343 aa16.96■□□□□ 0.31
NME1-208ENST00000487481 C22orf23Q9BZE7 217 aa16.96■□□□□ 0.31
NME1-208ENST00000487481 TRIM6Q9C030 488 aaPredicted RBP16.96■□□□□ 0.31
NME1-208ENST00000487481 ANO2Q9NQ90 1003 aa16.96■□□□□ 0.31
NME1-208ENST00000487481 HEBP1Q9NRV9 189 aa16.96■□□□□ 0.31
NME1-208ENST00000487481 ANGPTL2Q9UKU9 493 aa16.96■□□□□ 0.31
NME1-208ENST00000487481 ARID2Q68CP9 1835 aa16.96■□□□□ 0.3
NME1-208ENST00000487481 NID2Q14112 1375 aa16.95■□□□□ 0.3
NME1-208ENST00000487481 CYP3A7-CYP3A51PA0A087WV96 503 aa16.95■□□□□ 0.3
NME1-208ENST00000487481 FOXD2O60548 495 aaPredicted RBP16.95■□□□□ 0.3
NME1-208ENST00000487481 CYP3A7P24462 503 aa16.95■□□□□ 0.3
NME1-208ENST00000487481 QARSP47897 775 aaKnown RBP16.95■□□□□ 0.3
NME1-208ENST00000487481 AKAP17AQ02040 695 aaKnown RBP16.95■□□□□ 0.3
NME1-208ENST00000487481 HSP90AA2PQ14568 343 aaPredicted RBP16.95■□□□□ 0.3
NME1-208ENST00000487481 PSMD5Q16401 504 aa16.95■□□□□ 0.3
NME1-208ENST00000487481 PABPC1LQ4VXU2 614 aaKnown RBP16.95■□□□□ 0.3
NME1-208ENST00000487481 FERMT3Q86UX7 667 aa16.95■□□□□ 0.3
NME1-208ENST00000487481 SLC7A14Q8TBB6 771 aa16.95■□□□□ 0.3
NME1-208ENST00000487481 ETNPPLQ8TBG4 499 aa16.95■□□□□ 0.3
NME1-208ENST00000487481 TBCKQ8TEA7 893 aa16.95■□□□□ 0.3
NME1-208ENST00000487481 CPB2Q96IY4 423 aa16.95■□□□□ 0.3
NME1-208ENST00000487481 NXF3Q9H4D5 531 aaKnown RBP16.95■□□□□ 0.3
NME1-208ENST00000487481 SEMA4GQ9NTN9 838 aa16.95■□□□□ 0.3
NME1-208ENST00000487481 VWA8A3KMH1 1905 aa16.94■□□□□ 0.3
NME1-208ENST00000487481 SHISA7A6NL88 538 aa16.94■□□□□ 0.3
NME1-208ENST00000487481 MAN2B1O00754 1011 aa16.94■□□□□ 0.3
NME1-208ENST00000487481 TDP2O95551 362 aa16.94■□□□□ 0.3
NME1-208ENST00000487481 CCR3P51677 355 aa16.94■□□□□ 0.3
NME1-208ENST00000487481 EMC2Q15006 297 aa16.94■□□□□ 0.3
NME1-208ENST00000487481 CSRP2Q16527 193 aa16.94■□□□□ 0.3
NME1-208ENST00000487481 UVSSAQ2YD98 709 aa16.94■□□□□ 0.3
NME1-208ENST00000487481 PDXDC1Q6P996 788 aa16.94■□□□□ 0.3
NME1-208ENST00000487481 PRR23BQ6ZRT6 265 aa16.94■□□□□ 0.3
NME1-208ENST00000487481 RTL10Q7L3V2 364 aa16.94■□□□□ 0.3
NME1-208ENST00000487481 ZNF687Q8N1G0 1237 aa16.94■□□□□ 0.3
NME1-208ENST00000487481 ZNF579Q8NAF0 562 aaKnown RBP16.94■□□□□ 0.3
NME1-208ENST00000487481 LNX1Q8TBB1 728 aaPredicted RBP16.94■□□□□ 0.3
NME1-208ENST00000487481 HCFC1R1Q9NWW0 138 aa16.94■□□□□ 0.3
NME1-208ENST00000487481 GDE1Q9NZC3 331 aa16.94■□□□□ 0.3
NME1-208ENST00000487481 PMLP29590 882 aa16.93■□□□□ 0.3
NME1-208ENST00000487481 PTENP60484 403 aa16.93■□□□□ 0.3
NME1-208ENST00000487481 AXDND1Q5T1B0 1012 aaPredicted RBP16.93■□□□□ 0.3
NME1-208ENST00000487481 FAM171A1Q5VUB5 890 aa16.93■□□□□ 0.3
NME1-208ENST00000487481 MOXD1Q6UVY6 613 aa16.93■□□□□ 0.3
NME1-208ENST00000487481 IFNLR1Q8IU57 520 aaPredicted RBP16.93■□□□□ 0.3
NME1-208ENST00000487481 ING5Q8WYH8 240 aa16.93■□□□□ 0.3
NME1-208ENST00000487481 RABGGTAQ92696 567 aa16.93■□□□□ 0.3
NME1-208ENST00000487481 RNF26Q9BY78 433 aaPredicted RBP16.93■□□□□ 0.3
NME1-208ENST00000487481 BMP2KQ9NSY1 1161 aaPredicted RBP16.93■□□□□ 0.3
NME1-208ENST00000487481 VPS54Q9P1Q0 977 aa16.93■□□□□ 0.3
NME1-208ENST00000487481 DNMT3BQ9UBC3 853 aaKnown RBP16.93■□□□□ 0.3
NME1-208ENST00000487481 NDRG2Q9UN36 371 aaKnown RBP16.93■□□□□ 0.3
NME1-208ENST00000487481 MRPS23Q9Y3D9 190 aaKnown RBP16.93■□□□□ 0.3
NME1-208ENST00000487481 CEP295Q9C0D2 2601 aa16.92■□□□□ 0.3
NME1-208ENST00000487481 INO80B-WBP1J3KQ70 363 aa16.92■□□□□ 0.3
NME1-208ENST00000487481 EML1O00423 815 aa16.92■□□□□ 0.3
NME1-208ENST00000487481 KCNA4P22459 653 aa16.92■□□□□ 0.3
NME1-208ENST00000487481 AKAP5P24588 427 aa16.92■□□□□ 0.3
NME1-208ENST00000487481 SHC2P98077 582 aa16.92■□□□□ 0.3
NME1-208ENST00000487481 PPP2R5CQ13362 524 aa16.92■□□□□ 0.3
NME1-208ENST00000487481 MXD4Q14582 209 aaPredicted RBP16.92■□□□□ 0.3
NME1-208ENST00000487481 CEP57Q86XR8 500 aa16.92■□□□□ 0.3
NME1-208ENST00000487481 HASPINQ8TF76 798 aa16.92■□□□□ 0.3
NME1-208ENST00000487481 ELSPBP1Q96BH3 223 aa16.92■□□□□ 0.3
NME1-208ENST00000487481 PLA2G2FQ9BZM2 168 aa16.92■□□□□ 0.3
NME1-208ENST00000487481 SH3GLB2Q9NR46 395 aa16.92■□□□□ 0.3
NME1-208ENST00000487481 CACNG4Q9UBN1 327 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms