RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 LRRC55Q6ZSA7 311 aa5.99□□□□□ -1.45
SMC4-218ENST00000486711 PIK3C3Q8NEB9 887 aa5.99□□□□□ -1.45
SMC4-218ENST00000486711 PROKR1Q8TCW9 393 aa5.99□□□□□ -1.45
SMC4-218ENST00000486711 TGFBRAP1Q8WUH2 860 aa5.99□□□□□ -1.45
SMC4-218ENST00000486711 TSR2Q969E8 191 aaKnown RBP5.99□□□□□ -1.45
SMC4-218ENST00000486711 ANO3Q9BYT9 981 aa5.99□□□□□ -1.45
SMC4-218ENST00000486711 ENKD1Q9H0I2 346 aa5.99□□□□□ -1.45
SMC4-218ENST00000486711 EPC1Q9H2F5 836 aa5.99□□□□□ -1.45
SMC4-218ENST00000486711 CCM2LQ9NUG4 571 aaPredicted RBP5.99□□□□□ -1.45
SMC4-218ENST00000486711 GEMIN8Q9NWZ8 242 aaKnown RBP5.99□□□□□ -1.45
SMC4-218ENST00000486711 DNAJC28Q9NX36 388 aa5.99□□□□□ -1.45
SMC4-218ENST00000486711 ELL2O00472 640 aaPredicted RBP5.98□□□□□ -1.45
SMC4-218ENST00000486711 ABHD16AO95870 558 aa5.98□□□□□ -1.45
SMC4-218ENST00000486711 GCP02774 474 aa5.98□□□□□ -1.45
SMC4-218ENST00000486711 U2AF1L5P0DN76 240 aaPredicted RBP5.98□□□□□ -1.45
SMC4-218ENST00000486711 MTHFD2P13995 350 aa5.98□□□□□ -1.45
SMC4-218ENST00000486711 GYPEP15421 78 aa5.98□□□□□ -1.45
SMC4-218ENST00000486711 VCAM1P19320 739 aa5.98□□□□□ -1.45
SMC4-218ENST00000486711 MANFP55145 182 aaKnown RBP5.98□□□□□ -1.45
SMC4-218ENST00000486711 WNT3AP56704 352 aa5.98□□□□□ -1.45
SMC4-218ENST00000486711 U2AF1Q01081 240 aaKnown RBP eCLIP5.98□□□□□ -1.45
SMC4-218ENST00000486711 COL10A1Q03692 680 aa5.98□□□□□ -1.45
SMC4-218ENST00000486711 FAM214AQ32MH5 1076 aa5.98□□□□□ -1.45
SMC4-218ENST00000486711 EFCAB2Q5VUJ9 269 aa5.98□□□□□ -1.45
SMC4-218ENST00000486711 CCDC62Q6P9F0 684 aa5.98□□□□□ -1.45
SMC4-218ENST00000486711 KCNV1Q6PIU1 500 aa5.98□□□□□ -1.45
SMC4-218ENST00000486711 MYO1HQ8N1T3 1032 aa5.98□□□□□ -1.45
SMC4-218ENST00000486711 GLB1L3Q8NCI6 653 aaPredicted RBP5.98□□□□□ -1.45
SMC4-218ENST00000486711 OR5M3Q8NGP4 307 aa5.98□□□□□ -1.45
SMC4-218ENST00000486711 CPT1CQ8TCG5 803 aa5.98□□□□□ -1.45
SMC4-218ENST00000486711 RAX2Q96IS3 184 aa5.98□□□□□ -1.45
SMC4-218ENST00000486711 C8orf48Q96LL4 319 aa5.98□□□□□ -1.45
SMC4-218ENST00000486711 FAM193BQ96PV7 902 aaPredicted RBP5.98□□□□□ -1.45
SMC4-218ENST00000486711 CPPED1Q9BRF8 314 aaPredicted RBP5.98□□□□□ -1.45
SMC4-218ENST00000486711 GOLGA6CA6NDK9 693 aa5.97□□□□□ -1.45
SMC4-218ENST00000486711 GOLGA6BA6NDN3 693 aa5.97□□□□□ -1.45
SMC4-218ENST00000486711 NRP2O60462 931 aa5.97□□□□□ -1.45
SMC4-218ENST00000486711 RFPL1O75677 317 aa5.97□□□□□ -1.45
SMC4-218ENST00000486711 ABLIM3O94929 683 aa5.97□□□□□ -1.45
SMC4-218ENST00000486711 CLEC2LP0C7M8 214 aa5.97□□□□□ -1.45
SMC4-218ENST00000486711 GOLGA6DP0CG33 693 aa5.97□□□□□ -1.45
SMC4-218ENST00000486711 NR4A1P22736 598 aa5.97□□□□□ -1.45
SMC4-218ENST00000486711 XPAP23025 273 aaPredicted RBP5.97□□□□□ -1.45
SMC4-218ENST00000486711 GPR15P49685 360 aa5.97□□□□□ -1.45
SMC4-218ENST00000486711 CD69Q07108 199 aa5.97□□□□□ -1.45
SMC4-218ENST00000486711 LRRC41Q15345 812 aa5.97□□□□□ -1.45
SMC4-218ENST00000486711 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.97□□□□□ -1.45
SMC4-218ENST00000486711 CT83Q5H943 113 aa5.97□□□□□ -1.45
SMC4-218ENST00000486711 TMEM240Q5SV17 173 aa5.97□□□□□ -1.45
SMC4-218ENST00000486711 MBNL2Q5VZF2 373 aaKnown RBP5.97□□□□□ -1.45
SMC4-218ENST00000486711 FAM83AQ86UY5 434 aa5.97□□□□□ -1.45
SMC4-218ENST00000486711 JPH3Q8WXH2 748 aaPredicted RBP5.97□□□□□ -1.45
SMC4-218ENST00000486711 SSH1Q8WYL5 1049 aa5.97□□□□□ -1.45
SMC4-218ENST00000486711 ORAI2Q96SN7 254 aa5.97□□□□□ -1.45
SMC4-218ENST00000486711 MLST8Q9BVC4 326 aa5.97□□□□□ -1.45
SMC4-218ENST00000486711 QRSL1Q9H0R6 528 aaKnown RBP5.97□□□□□ -1.45
SMC4-218ENST00000486711 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.97□□□□□ -1.45
SMC4-218ENST00000486711 GOLGA6AQ9NYA3 693 aa5.97□□□□□ -1.45
SMC4-218ENST00000486711 ANKRD6Q9Y2G4 727 aa5.97□□□□□ -1.45
SMC4-218ENST00000486711 PPP2R3BQ9Y5P8 575 aa5.97□□□□□ -1.45
SMC4-218ENST00000486711 PCSK5Q92824 1860 aa5.96□□□□□ -1.45
SMC4-218ENST00000486711 FZD9O00144 591 aa5.96□□□□□ -1.46
SMC4-218ENST00000486711 SEC24DO94855 1032 aaPredicted RBP5.96□□□□□ -1.46
SMC4-218ENST00000486711 SCAF4O95104 1147 aaKnown RBP5.96□□□□□ -1.46
SMC4-218ENST00000486711 LY86O95711 162 aa5.96□□□□□ -1.46
SMC4-218ENST00000486711 ATF3P18847 181 aa5.96□□□□□ -1.46
SMC4-218ENST00000486711 BMP5P22003 454 aa5.96□□□□□ -1.46
SMC4-218ENST00000486711 TGM1P22735 817 aa5.96□□□□□ -1.46
SMC4-218ENST00000486711 MRPS9P82933 396 aaKnown RBP5.96□□□□□ -1.46
SMC4-218ENST00000486711 TIGD2Q4W5G0 525 aa5.96□□□□□ -1.46
SMC4-218ENST00000486711 CCDC178Q5BJE1 867 aa5.96□□□□□ -1.46
SMC4-218ENST00000486711 TOR2AQ5JU69 321 aa5.96□□□□□ -1.46
SMC4-218ENST00000486711 CPA6Q8N4T0 437 aa5.96□□□□□ -1.46
SMC4-218ENST00000486711 OR52N2Q8NGI0 321 aa5.96□□□□□ -1.46
SMC4-218ENST00000486711 EAF2Q96CJ1 260 aaPredicted RBP5.96□□□□□ -1.46
SMC4-218ENST00000486711 IL17RAQ96F46 866 aa5.96□□□□□ -1.46
SMC4-218ENST00000486711 RTFDC1Q9BY42 306 aaPredicted RBP5.96□□□□□ -1.46
SMC4-218ENST00000486711 TCF7L1Q9HCS4 588 aa5.96□□□□□ -1.46
SMC4-218ENST00000486711 EIF2B4Q9UI10 523 aaKnown RBP5.96□□□□□ -1.46
SMC4-218ENST00000486711 PNMA8BQ9ULN7 279 aaPredicted RBP5.96□□□□□ -1.46
SMC4-218ENST00000486711 NOB1Q9ULX3 412 aaKnown RBP5.96□□□□□ -1.46
SMC4-218ENST00000486711 EDARQ9UNE0 448 aa5.96□□□□□ -1.46
SMC4-218ENST00000486711 HDAC5Q9UQL6 1122 aa5.96□□□□□ -1.46
SMC4-218ENST00000486711 HS3ST4Q9Y661 456 aa5.96□□□□□ -1.46
SMC4-218ENST00000486711 PRSS38A1L453 326 aa5.95□□□□□ -1.46
SMC4-218ENST00000486711 KIF3BO15066 747 aa5.95□□□□□ -1.46
SMC4-218ENST00000486711 IL33O95760 270 aa5.95□□□□□ -1.46
SMC4-218ENST00000486711 PFKMP08237 780 aa5.95□□□□□ -1.46
SMC4-218ENST00000486711 PF4V1P10720 104 aa5.95□□□□□ -1.46
SMC4-218ENST00000486711 PROZP22891 400 aa5.95□□□□□ -1.46
SMC4-218ENST00000486711 CASRP41180 1078 aa5.95□□□□□ -1.46
SMC4-218ENST00000486711 SLC5A3P53794 718 aa5.95□□□□□ -1.46
SMC4-218ENST00000486711 NRG3P56975 720 aa5.95□□□□□ -1.46
SMC4-218ENST00000486711 SRSF2Q01130 221 aaKnown RBP5.95□□□□□ -1.46
SMC4-218ENST00000486711 DUSP2Q05923 314 aa5.95□□□□□ -1.46
SMC4-218ENST00000486711 MRPL49Q13405 166 aaKnown RBP5.95□□□□□ -1.46
SMC4-218ENST00000486711 MLC1Q15049 377 aa5.95□□□□□ -1.46
SMC4-218ENST00000486711 VPS72Q15906 364 aa5.95□□□□□ -1.46
SMC4-218ENST00000486711 ZBTB41Q5SVQ8 909 aa5.95□□□□□ -1.46
SMC4-218ENST00000486711 FAM102BQ5T8I3 360 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms