RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 CMA1P23946 247 aa19.93■□□□□ 0.78
COL1A1-207ENST00000486572 LIG4P49917 911 aa19.93■□□□□ 0.78
COL1A1-207ENST00000486572 ERVFC1P60507 584 aa19.93■□□□□ 0.78
COL1A1-207ENST00000486572 MAP4K3Q8IVH8 894 aa19.93■□□□□ 0.78
COL1A1-207ENST00000486572 MICAL1Q8TDZ2 1067 aa19.93■□□□□ 0.78
COL1A1-207ENST00000486572 BCL7CQ8WUZ0 217 aaPredicted RBP19.93■□□□□ 0.78
COL1A1-207ENST00000486572 HLA-CQ95604 372 aa19.93■□□□□ 0.78
COL1A1-207ENST00000486572 ZBTB45Q96K62 511 aaPredicted RBP19.93■□□□□ 0.78
COL1A1-207ENST00000486572 TCF25Q9BQ70 676 aa19.93■□□□□ 0.78
COL1A1-207ENST00000486572 TRIM9Q9C026 710 aa19.93■□□□□ 0.78
COL1A1-207ENST00000486572 MRPL44Q9H9J2 332 aaKnown RBP19.93■□□□□ 0.78
COL1A1-207ENST00000486572 ENTPD7Q9NQZ7 604 aa19.93■□□□□ 0.78
COL1A1-207ENST00000486572 OLFML3Q9NRN5 406 aa19.93■□□□□ 0.78
COL1A1-207ENST00000486572 TOPORSQ9NS56 1045 aaPredicted RBP19.93■□□□□ 0.78
COL1A1-207ENST00000486572 FAN1Q9Y2M0 1017 aa19.93■□□□□ 0.78
COL1A1-207ENST00000486572 PTGESO14684 152 aa19.92■□□□□ 0.78
COL1A1-207ENST00000486572 NRP1O14786 923 aa19.92■□□□□ 0.78
COL1A1-207ENST00000486572 CLDN3O15551 220 aa19.92■□□□□ 0.78
COL1A1-207ENST00000486572 NR1I2O75469 434 aa19.92■□□□□ 0.78
COL1A1-207ENST00000486572 OR1G1P47890 313 aa19.92■□□□□ 0.78
COL1A1-207ENST00000486572 YARSP54577 528 aaKnown RBP19.92■□□□□ 0.78
COL1A1-207ENST00000486572 OSTNP61366 133 aa19.92■□□□□ 0.78
COL1A1-207ENST00000486572 MCL1Q07820 350 aa19.92■□□□□ 0.78
COL1A1-207ENST00000486572 ZC2HC1CQ53FD0 456 aaPredicted RBP19.92■□□□□ 0.78
COL1A1-207ENST00000486572 HERC4Q5GLZ8 1057 aaPredicted RBP19.92■□□□□ 0.78
COL1A1-207ENST00000486572 ZNF720Q7Z2F6 126 aa19.92■□□□□ 0.78
COL1A1-207ENST00000486572 CCDC65Q8IXS2 484 aa19.92■□□□□ 0.78
COL1A1-207ENST00000486572 HVCN1Q96D96 273 aa19.92■□□□□ 0.78
COL1A1-207ENST00000486572 PANK4Q9NVE7 773 aa19.92■□□□□ 0.78
COL1A1-207ENST00000486572 PRG3Q9Y2Y8 225 aaPredicted RBP19.92■□□□□ 0.78
COL1A1-207ENST00000486572 PCDHGC5Q9Y5F6 944 aa19.92■□□□□ 0.78
COL1A1-207ENST00000486572 NCK2O43639 380 aa19.91■□□□□ 0.78
COL1A1-207ENST00000486572 PPP1R37O75864 691 aa19.91■□□□□ 0.78
COL1A1-207ENST00000486572 THP07101 528 aa19.91■□□□□ 0.78
COL1A1-207ENST00000486572 PFKFB1P16118 471 aa19.91■□□□□ 0.78
COL1A1-207ENST00000486572 MATR3P43243 847 aaKnown RBP eCLIP19.91■□□□□ 0.78
COL1A1-207ENST00000486572 HYAL1Q12794 435 aa19.91■□□□□ 0.78
COL1A1-207ENST00000486572 TUSC3Q13454 348 aa19.91■□□□□ 0.78
COL1A1-207ENST00000486572 COL19A1Q14993 1142 aa19.91■□□□□ 0.78
COL1A1-207ENST00000486572 PLPP4Q5VZY2 271 aa19.91■□□□□ 0.78
COL1A1-207ENST00000486572 CNNM4Q6P4Q7 775 aa19.91■□□□□ 0.78
COL1A1-207ENST00000486572 TMC7Q7Z402 723 aa19.91■□□□□ 0.78
COL1A1-207ENST00000486572 ADGRD2Q7Z7M1 963 aa19.91■□□□□ 0.78
COL1A1-207ENST00000486572 DDX53Q86TM3 631 aaKnown RBP19.91■□□□□ 0.78
COL1A1-207ENST00000486572 ATXN2LQ8WWM7 1075 aaKnown RBP19.91■□□□□ 0.78
COL1A1-207ENST00000486572 CXCL16Q9H2A7 254 aa19.91■□□□□ 0.78
COL1A1-207ENST00000486572 NGRNQ9NPE2 291 aaKnown RBP19.91■□□□□ 0.78
COL1A1-207ENST00000486572 MARCH5Q9NX47 278 aa19.91■□□□□ 0.78
COL1A1-207ENST00000486572 TBC1D7Q9P0N9 293 aa19.91■□□□□ 0.78
COL1A1-207ENST00000486572 STK39Q9UEW8 545 aa19.91■□□□□ 0.78
COL1A1-207ENST00000486572 MYO7AQ13402 2215 aa19.9■□□□□ 0.78
COL1A1-207ENST00000486572 A0A1B0GVL5 298 aa19.9■□□□□ 0.78
COL1A1-207ENST00000486572 ASIC1P78348 528 aa19.9■□□□□ 0.78
COL1A1-207ENST00000486572 CEP57L1Q8IYX8 460 aa19.9■□□□□ 0.78
COL1A1-207ENST00000486572 VPS52Q8N1B4 723 aa19.9■□□□□ 0.78
COL1A1-207ENST00000486572 PABPC5Q96DU9 382 aaKnown RBP19.9■□□□□ 0.78
COL1A1-207ENST00000486572 SNX27Q96L92 541 aa19.9■□□□□ 0.78
COL1A1-207ENST00000486572 ACAP3Q96P50 834 aa19.9■□□□□ 0.78
COL1A1-207ENST00000486572 STRA6Q9BX79 667 aa19.9■□□□□ 0.78
COL1A1-207ENST00000486572 UBE2ZQ9H832 354 aaPredicted RBP19.9■□□□□ 0.78
COL1A1-207ENST00000486572 GDPD2Q9HCC8 539 aa19.9■□□□□ 0.78
COL1A1-207ENST00000486572 HPSEQ9Y251 543 aa19.9■□□□□ 0.78
COL1A1-207ENST00000486572 TCHHQ07283 1943 aa19.9■□□□□ 0.78
COL1A1-207ENST00000486572 A0A1W2PQ27 194 aa19.89■□□□□ 0.77
COL1A1-207ENST00000486572 A0A1W2PQ64 194 aa19.89■□□□□ 0.77
COL1A1-207ENST00000486572 A0A1W2PQD8 194 aa19.89■□□□□ 0.77
COL1A1-207ENST00000486572 GCNT3O95395 438 aa19.89■□□□□ 0.77
COL1A1-207ENST00000486572 SLFN14P0C7P3 912 aa19.89■□□□□ 0.77
COL1A1-207ENST00000486572 ANP32AP39687 249 aaKnown RBP19.89■□□□□ 0.77
COL1A1-207ENST00000486572 NRIP1P48552 1158 aa19.89■□□□□ 0.77
COL1A1-207ENST00000486572 MRPS5P82675 430 aaKnown RBP19.89■□□□□ 0.77
COL1A1-207ENST00000486572 TFF2Q03403 129 aa19.89■□□□□ 0.77
COL1A1-207ENST00000486572 COASYQ13057 564 aa19.89■□□□□ 0.77
COL1A1-207ENST00000486572 ALCAMQ13740 583 aa19.89■□□□□ 0.77
COL1A1-207ENST00000486572 SMC1AQ14683 1233 aaKnown RBP19.89■□□□□ 0.77
COL1A1-207ENST00000486572 BMS1Q14692 1282 aaKnown RBP19.89■□□□□ 0.77
COL1A1-207ENST00000486572 NAB2Q15742 525 aa19.89■□□□□ 0.77
COL1A1-207ENST00000486572 AAK1Q2M2I8 961 aa19.89■□□□□ 0.77
COL1A1-207ENST00000486572 GLRA4Q5JXX5 417 aa19.89■□□□□ 0.77
COL1A1-207ENST00000486572 SLC39A4Q6P5W5 647 aa19.89■□□□□ 0.77
COL1A1-207ENST00000486572 C7orf25Q9BPX7 421 aa19.89■□□□□ 0.77
COL1A1-207ENST00000486572 COLEC11Q9BWP8 271 aa19.89■□□□□ 0.77
COL1A1-207ENST00000486572 VN1R3Q9BXE9 311 aa19.89■□□□□ 0.77
COL1A1-207ENST00000486572 HAPLN2Q9GZV7 340 aa19.89■□□□□ 0.77
COL1A1-207ENST00000486572 ZBP1Q9H171 429 aa19.89■□□□□ 0.77
COL1A1-207ENST00000486572 TLE6Q9H808 572 aa19.89■□□□□ 0.77
COL1A1-207ENST00000486572 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.88■□□□□ 0.77
COL1A1-207ENST00000486572 ACTN4O43707 911 aaKnown RBP19.88■□□□□ 0.77
COL1A1-207ENST00000486572 GTF2F1P35269 517 aaKnown RBP eCLIP19.88■□□□□ 0.77
COL1A1-207ENST00000486572 CASP5P51878 434 aa19.88■□□□□ 0.77
COL1A1-207ENST00000486572 KYAT1Q16773 422 aa19.88■□□□□ 0.77
COL1A1-207ENST00000486572 SEZ6Q53EL9 994 aa19.88■□□□□ 0.77
COL1A1-207ENST00000486572 XKR4Q5GH76 650 aa19.88■□□□□ 0.77
COL1A1-207ENST00000486572 L1TD1Q5T7N2 865 aaKnown RBP19.88■□□□□ 0.77
COL1A1-207ENST00000486572 ALKAL1Q6UXT8 129 aa19.88■□□□□ 0.77
COL1A1-207ENST00000486572 RBM23Q86U06 439 aaKnown RBP19.88■□□□□ 0.77
COL1A1-207ENST00000486572 PPP1R10Q96QC0 940 aaKnown RBP19.88■□□□□ 0.77
COL1A1-207ENST00000486572 CDCA3Q99618 268 aaPredicted RBP19.88■□□□□ 0.77
COL1A1-207ENST00000486572 IGFLR1Q9H665 355 aa19.88■□□□□ 0.77
COL1A1-207ENST00000486572 CLDND1Q9NY35 253 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms