RNA–Protein interactions for RNA: ENST00000486336.1

SNX21-211, Transcript of sorting nexin family member 21, humanhuman

TSL 3

Gene SNX21, Length 701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-211ENST00000486336 VCANP13611 3396 aa12.12□□□□□ -0.47
SNX21-211ENST00000486336 SPTBN5Q9NRC6 3674 aaKnown RBP12.11□□□□□ -0.47
SNX21-211ENST00000486336 CASTOR2A6NHX0 329 aa12.11□□□□□ -0.47
SNX21-211ENST00000486336 URODP06132 367 aa12.11□□□□□ -0.47
SNX21-211ENST00000486336 THP07101 528 aa12.11□□□□□ -0.47
SNX21-211ENST00000486336 KLRC2P26717 231 aa12.11□□□□□ -0.47
SNX21-211ENST00000486336 DDIT3P35638 169 aa12.11□□□□□ -0.47
SNX21-211ENST00000486336 YARSP54577 528 aaKnown RBP12.11□□□□□ -0.47
SNX21-211ENST00000486336 DSC1Q08554 894 aa12.11□□□□□ -0.47
SNX21-211ENST00000486336 COASYQ13057 564 aa12.11□□□□□ -0.47
SNX21-211ENST00000486336 SLC39A14Q15043 492 aa12.11□□□□□ -0.47
SNX21-211ENST00000486336 SMAD2Q15796 467 aaKnown RBP12.11□□□□□ -0.47
SNX21-211ENST00000486336 RRAGBQ5VZM2 374 aa12.11□□□□□ -0.47
SNX21-211ENST00000486336 KIAA1841Q6NSI8 718 aa12.11□□□□□ -0.47
SNX21-211ENST00000486336 ANKRD54Q6NXT1 300 aa12.11□□□□□ -0.47
SNX21-211ENST00000486336 KRI1Q8N9T8 703 aaKnown RBP12.11□□□□□ -0.47
SNX21-211ENST00000486336 GSTCDQ8NEC7 633 aa12.11□□□□□ -0.47
SNX21-211ENST00000486336 LRRC15Q8TF66 581 aa12.11□□□□□ -0.47
SNX21-211ENST00000486336 SPIRE2Q8WWL2 714 aa12.11□□□□□ -0.47
SNX21-211ENST00000486336 LARP4BQ92615 738 aaKnown RBP12.11□□□□□ -0.47
SNX21-211ENST00000486336 CASP10Q92851 521 aa12.11□□□□□ -0.47
SNX21-211ENST00000486336 BICD1Q96G01 975 aa12.11□□□□□ -0.47
SNX21-211ENST00000486336 ZBTB45Q96K62 511 aaPredicted RBP12.11□□□□□ -0.47
SNX21-211ENST00000486336 REEP2Q9BRK0 252 aa12.11□□□□□ -0.47
SNX21-211ENST00000486336 CCDC94Q9BW85 323 aaPredicted RBP12.11□□□□□ -0.47
SNX21-211ENST00000486336 EMILIN2Q9BXX0 1053 aa12.11□□□□□ -0.47
SNX21-211ENST00000486336 CXCL16Q9H2A7 254 aa12.11□□□□□ -0.47
SNX21-211ENST00000486336 CD320Q9NPF0 282 aa12.11□□□□□ -0.47
SNX21-211ENST00000486336 MRPL17Q9NRX2 175 aaKnown RBP12.11□□□□□ -0.47
SNX21-211ENST00000486336 MARCH5Q9NX47 278 aa12.11□□□□□ -0.47
SNX21-211ENST00000486336 LARSQ9P2J5 1176 aaKnown RBP12.11□□□□□ -0.47
SNX21-211ENST00000486336 STK39Q9UEW8 545 aa12.11□□□□□ -0.47
SNX21-211ENST00000486336 USP15Q9Y4E8 981 aaPredicted RBP12.11□□□□□ -0.47
SNX21-211ENST00000486336 TDRD15B5MCY1 1934 aaKnown RBP12.11□□□□□ -0.47
SNX21-211ENST00000486336 TBCAO75347 108 aaKnown RBP12.1□□□□□ -0.47
SNX21-211ENST00000486336 SOD2P04179 222 aa12.1□□□□□ -0.47
SNX21-211ENST00000486336 MAPTP10636 758 aaKnown RBP12.1□□□□□ -0.47
SNX21-211ENST00000486336 TUSC3Q13454 348 aa12.1□□□□□ -0.47
SNX21-211ENST00000486336 PTPN14Q15678 1187 aa12.1□□□□□ -0.47
SNX21-211ENST00000486336 GLRA4Q5JXX5 417 aa12.1□□□□□ -0.47
SNX21-211ENST00000486336 ADHFE1Q8IWW8 467 aa12.1□□□□□ -0.47
SNX21-211ENST00000486336 CEP120Q8N960 986 aa12.1□□□□□ -0.47
SNX21-211ENST00000486336 SMRP1Q8NCR6 262 aa12.1□□□□□ -0.47
SNX21-211ENST00000486336 TMEM161BQ8NDZ6 487 aa12.1□□□□□ -0.47
SNX21-211ENST00000486336 HASPINQ8TF76 798 aa12.1□□□□□ -0.47
SNX21-211ENST00000486336 ACAP3Q96P50 834 aa12.1□□□□□ -0.47
SNX21-211ENST00000486336 KLHL5Q96PQ7 755 aa12.1□□□□□ -0.47
SNX21-211ENST00000486336 NTPCRQ9BSD7 190 aaKnown RBP12.1□□□□□ -0.47
SNX21-211ENST00000486336 HERC2P3Q9BVR0 1158 aa12.1□□□□□ -0.47
SNX21-211ENST00000486336 CDT1Q9H211 546 aa12.1□□□□□ -0.47
SNX21-211ENST00000486336 ANKFY1Q9P2R3 1169 aa12.1□□□□□ -0.47
SNX21-211ENST00000486336 DAXXQ9UER7 740 aaPredicted RBP12.1□□□□□ -0.47
SNX21-211ENST00000486336 PRKAG3Q9UGI9 489 aa12.1□□□□□ -0.47
SNX21-211ENST00000486336 ODF2LQ9ULJ1 636 aa12.1□□□□□ -0.47
SNX21-211ENST00000486336 SSX2IPQ9Y2D8 614 aa12.1□□□□□ -0.47
SNX21-211ENST00000486336 HCFC2Q9Y5Z7 792 aa12.1□□□□□ -0.47
SNX21-211ENST00000486336 MYH11P35749 1972 aa12.1□□□□□ -0.47
SNX21-211ENST00000486336 H0YCG3 227 aa12.09□□□□□ -0.47
SNX21-211ENST00000486336 K7ENM7 598 aa12.09□□□□□ -0.47
SNX21-211ENST00000486336 PTGESO14684 152 aa12.09□□□□□ -0.47
SNX21-211ENST00000486336 SPTLC2O15270 562 aa12.09□□□□□ -0.47
SNX21-211ENST00000486336 CNPP09543 421 aaKnown RBP12.09□□□□□ -0.47
SNX21-211ENST00000486336 MYBP10242 640 aa12.09□□□□□ -0.47
SNX21-211ENST00000486336 MCF2P10911 925 aa12.09□□□□□ -0.47
SNX21-211ENST00000486336 EPCAMP16422 314 aa12.09□□□□□ -0.47
SNX21-211ENST00000486336 GRM5P41594 1212 aa12.09□□□□□ -0.47
SNX21-211ENST00000486336 GLUD2P49448 558 aa12.09□□□□□ -0.47
SNX21-211ENST00000486336 ZP2Q05996 745 aa12.09□□□□□ -0.47
SNX21-211ENST00000486336 HSP90AA2PQ14568 343 aaPredicted RBP12.09□□□□□ -0.47
SNX21-211ENST00000486336 TPRNQ4KMQ1 711 aa12.09□□□□□ -0.47
SNX21-211ENST00000486336 RARS2Q5T160 578 aaKnown RBP12.09□□□□□ -0.47
SNX21-211ENST00000486336 FUT10Q6P4F1 479 aa12.09□□□□□ -0.47
SNX21-211ENST00000486336 SYCE2Q6PIF2 218 aa12.09□□□□□ -0.47
SNX21-211ENST00000486336 MPZL3Q6UWV2 235 aa12.09□□□□□ -0.47
SNX21-211ENST00000486336 TMEM184AQ6ZMB5 413 aa12.09□□□□□ -0.47
SNX21-211ENST00000486336 SV2BQ7L1I2 683 aa12.09□□□□□ -0.47
SNX21-211ENST00000486336 DYMQ7RTS9 669 aa12.09□□□□□ -0.47
SNX21-211ENST00000486336 HAUS6Q7Z4H7 955 aa12.09□□□□□ -0.47
SNX21-211ENST00000486336 PPFIBP1Q86W92 1011 aa12.09□□□□□ -0.47
SNX21-211ENST00000486336 CEP57Q86XR8 500 aa12.09□□□□□ -0.47
SNX21-211ENST00000486336 C12orf76Q8N812 135 aaPredicted RBP12.09□□□□□ -0.47
SNX21-211ENST00000486336 B3GALT6Q96L58 329 aa12.09□□□□□ -0.47
SNX21-211ENST00000486336 POP1Q99575 1024 aaKnown RBP12.09□□□□□ -0.47
SNX21-211ENST00000486336 PAAF1Q9BRP4 392 aa12.09□□□□□ -0.47
SNX21-211ENST00000486336 GPR62Q9BZJ7 368 aa12.09□□□□□ -0.47
SNX21-211ENST00000486336 EPHX3Q9H6B9 360 aa12.09□□□□□ -0.47
SNX21-211ENST00000486336 PARVGQ9HBI0 331 aa12.09□□□□□ -0.47
SNX21-211ENST00000486336 PTPRHQ9HD43 1115 aa12.09□□□□□ -0.47
SNX21-211ENST00000486336 TOPORSQ9NS56 1045 aaPredicted RBP12.09□□□□□ -0.47
SNX21-211ENST00000486336 ADAM28Q9UKQ2 775 aa12.09□□□□□ -0.47
SNX21-211ENST00000486336 IRAK3Q9Y616 596 aa12.09□□□□□ -0.47
SNX21-211ENST00000486336 NCOR1O75376 2440 aa12.09□□□□□ -0.47
SNX21-211ENST00000486336 ZMYM2Q9UBW7 1377 aa12.08□□□□□ -0.48
SNX21-211ENST00000486336 CLDN3O15551 220 aa12.08□□□□□ -0.48
SNX21-211ENST00000486336 TRAK2O60296 914 aa12.08□□□□□ -0.48
SNX21-211ENST00000486336 WEE2P0C1S8 567 aa12.08□□□□□ -0.48
SNX21-211ENST00000486336 ZSCAN22P10073 491 aaPredicted RBP12.08□□□□□ -0.48
SNX21-211ENST00000486336 HOXB8P17481 243 aaPredicted RBP12.08□□□□□ -0.48
SNX21-211ENST00000486336 STAT6P42226 847 aa12.08□□□□□ -0.48
SNX21-211ENST00000486336 NASPP49321 788 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms