RNA–Protein interactions for RNA: ENST00000486325.1

VTI1BP1-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 1, humanhuman

BASIC

Gene VTI1BP1, Length 700 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP1-201ENST00000486325 CKBP12277 381 aa14.4□□□□□ -0.1
VTI1BP1-201ENST00000486325 ZSCAN20P17040 1043 aaPredicted RBP14.4□□□□□ -0.1
VTI1BP1-201ENST00000486325 FMO5P49326 533 aa14.4□□□□□ -0.1
VTI1BP1-201ENST00000486325 MNX1P50219 401 aaPredicted RBP14.4□□□□□ -0.1
VTI1BP1-201ENST00000486325 FBXO47Q5MNV8 452 aa14.4□□□□□ -0.1
VTI1BP1-201ENST00000486325 ZNF618Q5T7W0 954 aa14.4□□□□□ -0.1
VTI1BP1-201ENST00000486325 GBP6Q6ZN66 633 aa14.4□□□□□ -0.1
VTI1BP1-201ENST00000486325 CD302Q8IX05 232 aa14.4□□□□□ -0.1
VTI1BP1-201ENST00000486325 THNSL1Q8IYQ7 743 aa14.4□□□□□ -0.1
VTI1BP1-201ENST00000486325 ZSWIM2Q8NEG5 633 aa14.4□□□□□ -0.1
VTI1BP1-201ENST00000486325 TMEM40Q8WWA1 233 aa14.4□□□□□ -0.1
VTI1BP1-201ENST00000486325 WNT8BQ93098 351 aa14.4□□□□□ -0.1
VTI1BP1-201ENST00000486325 ACAP3Q96P50 834 aa14.4□□□□□ -0.1
VTI1BP1-201ENST00000486325 CCDC94Q9BW85 323 aaPredicted RBP14.4□□□□□ -0.1
VTI1BP1-201ENST00000486325 EDEM3Q9BZQ6 932 aa14.4□□□□□ -0.1
VTI1BP1-201ENST00000486325 ST3GAL5Q9UNP4 418 aa14.4□□□□□ -0.1
VTI1BP1-201ENST00000486325 PITPNM1O00562 1244 aa14.39□□□□□ -0.11
VTI1BP1-201ENST00000486325 FAM189A1O60320 539 aa14.39□□□□□ -0.11
VTI1BP1-201ENST00000486325 CTSHP09668 335 aa14.39□□□□□ -0.11
VTI1BP1-201ENST00000486325 STAG3L1P0CL83 205 aa14.39□□□□□ -0.11
VTI1BP1-201ENST00000486325 FGFR4P22455 802 aa14.39□□□□□ -0.11
VTI1BP1-201ENST00000486325 GRM5P41594 1212 aa14.39□□□□□ -0.11
VTI1BP1-201ENST00000486325 CLDN10P78369 228 aa14.39□□□□□ -0.11
VTI1BP1-201ENST00000486325 NFX1Q12986 1120 aaKnown RBP14.39□□□□□ -0.11
VTI1BP1-201ENST00000486325 SYCP1Q15431 976 aa14.39□□□□□ -0.11
VTI1BP1-201ENST00000486325 EXOC3L4Q17RC7 722 aa14.39□□□□□ -0.11
VTI1BP1-201ENST00000486325 FIGNQ5HY92 759 aa14.39□□□□□ -0.11
VTI1BP1-201ENST00000486325 KRT39Q6A163 491 aa14.39□□□□□ -0.11
VTI1BP1-201ENST00000486325 FAM228AQ86W67 206 aa14.39□□□□□ -0.11
VTI1BP1-201ENST00000486325 BRSK2Q8IWQ3 736 aa14.39□□□□□ -0.11
VTI1BP1-201ENST00000486325 HACE1Q8IYU2 909 aa14.39□□□□□ -0.11
VTI1BP1-201ENST00000486325 CCDC127Q96BQ5 260 aa14.39□□□□□ -0.11
VTI1BP1-201ENST00000486325 TSPAN18Q96SJ8 248 aa14.39□□□□□ -0.11
VTI1BP1-201ENST00000486325 TRIM6Q9C030 488 aaPredicted RBP14.39□□□□□ -0.11
VTI1BP1-201ENST00000486325 MCOLN1Q9GZU1 580 aa14.39□□□□□ -0.11
VTI1BP1-201ENST00000486325 ASB7Q9H672 318 aa14.39□□□□□ -0.11
VTI1BP1-201ENST00000486325 C11orf49Q9H6J7 331 aa14.39□□□□□ -0.11
VTI1BP1-201ENST00000486325 PLEKHA5Q9HAU0 1116 aa14.39□□□□□ -0.11
VTI1BP1-201ENST00000486325 PIN4Q9Y237 131 aaKnown RBP14.39□□□□□ -0.11
VTI1BP1-201ENST00000486325 DAAM1Q9Y4D1 1078 aa14.39□□□□□ -0.11
VTI1BP1-201ENST00000486325 DLATP10515 647 aaKnown RBP14.38□□□□□ -0.11
VTI1BP1-201ENST00000486325 SKIP12755 728 aa14.38□□□□□ -0.11
VTI1BP1-201ENST00000486325 SELPP16109 830 aa14.38□□□□□ -0.11
VTI1BP1-201ENST00000486325 TNNI1P19237 187 aa14.38□□□□□ -0.11
VTI1BP1-201ENST00000486325 YARSP54577 528 aaKnown RBP14.38□□□□□ -0.11
VTI1BP1-201ENST00000486325 PAK2Q13177 524 aa14.38□□□□□ -0.11
VTI1BP1-201ENST00000486325 TBX2Q13207 712 aaPredicted RBP14.38□□□□□ -0.11
VTI1BP1-201ENST00000486325 HS1BP3Q53T59 392 aa14.38□□□□□ -0.11
VTI1BP1-201ENST00000486325 NECAB2Q7Z6G3 386 aa14.38□□□□□ -0.11
VTI1BP1-201ENST00000486325 CDR2LQ86X02 465 aaPredicted RBP14.38□□□□□ -0.11
VTI1BP1-201ENST00000486325 NT5DC4Q86YG4 428 aa14.38□□□□□ -0.11
VTI1BP1-201ENST00000486325 EHBP1Q8NDI1 1231 aa14.38□□□□□ -0.11
VTI1BP1-201ENST00000486325 ZNF397Q8NF99 534 aaPredicted RBP14.38□□□□□ -0.11
VTI1BP1-201ENST00000486325 NEK11Q8NG66 645 aa14.38□□□□□ -0.11
VTI1BP1-201ENST00000486325 CACTINQ8WUQ7 758 aaKnown RBP14.38□□□□□ -0.11
VTI1BP1-201ENST00000486325 TRIM44Q96DX7 344 aaPredicted RBP14.38□□□□□ -0.11
VTI1BP1-201ENST00000486325 MMRN2Q9H8L6 949 aa14.38□□□□□ -0.11
VTI1BP1-201ENST00000486325 TMEM8AQ9HCN3 771 aa14.38□□□□□ -0.11
VTI1BP1-201ENST00000486325 CEP350Q5VT06 3117 aa14.37□□□□□ -0.11
VTI1BP1-201ENST00000486325 LRRIQ3A6PVS8 624 aaPredicted RBP14.37□□□□□ -0.11
VTI1BP1-201ENST00000486325 PQBP1O60828 265 aaKnown RBP14.37□□□□□ -0.11
VTI1BP1-201ENST00000486325 NPTXRO95502 500 aa14.37□□□□□ -0.11
VTI1BP1-201ENST00000486325 TRIM49P0CI25 452 aa14.37□□□□□ -0.11
VTI1BP1-201ENST00000486325 TRIM49CP0CI26 452 aa14.37□□□□□ -0.11
VTI1BP1-201ENST00000486325 TRIM21P19474 475 aaKnown RBP14.37□□□□□ -0.11
VTI1BP1-201ENST00000486325 ATN1P54259 1190 aaPredicted RBP14.37□□□□□ -0.11
VTI1BP1-201ENST00000486325 DLG4P78352 724 aa14.37□□□□□ -0.11
VTI1BP1-201ENST00000486325 KCNMA1Q12791 1236 aa14.37□□□□□ -0.11
VTI1BP1-201ENST00000486325 LPIN1Q14693 890 aa14.37□□□□□ -0.11
VTI1BP1-201ENST00000486325 DUOXA2Q1HG44 320 aa14.37□□□□□ -0.11
VTI1BP1-201ENST00000486325 TSR1Q2NL82 804 aaKnown RBP14.37□□□□□ -0.11
VTI1BP1-201ENST00000486325 TWF2Q6IBS0 349 aaKnown RBP14.37□□□□□ -0.11
VTI1BP1-201ENST00000486325 LRRC8DQ7L1W4 858 aa14.37□□□□□ -0.11
VTI1BP1-201ENST00000486325 CCDC186Q7Z3E2 898 aa14.37□□□□□ -0.11
VTI1BP1-201ENST00000486325 WDR49Q8IV35 697 aa14.37□□□□□ -0.11
VTI1BP1-201ENST00000486325 PLEKHO2Q8TD55 490 aa14.37□□□□□ -0.11
VTI1BP1-201ENST00000486325 CGRRF1Q99675 332 aa14.37□□□□□ -0.11
VTI1BP1-201ENST00000486325 TRAIPQ9BWF2 469 aa14.37□□□□□ -0.11
VTI1BP1-201ENST00000486325 PDE11AQ9HCR9 933 aa14.37□□□□□ -0.11
VTI1BP1-201ENST00000486325 ERVK-5Q9HDB9 667 aa14.37□□□□□ -0.11
VTI1BP1-201ENST00000486325 PLCB1Q9NQ66 1216 aa14.37□□□□□ -0.11
VTI1BP1-201ENST00000486325 TOPORSQ9NS56 1045 aaPredicted RBP14.37□□□□□ -0.11
VTI1BP1-201ENST00000486325 PADI3Q9ULW8 664 aa14.37□□□□□ -0.11
VTI1BP1-201ENST00000486325 SIK3Q9Y2K2 1263 aa14.37□□□□□ -0.11
VTI1BP1-201ENST00000486325 COQ4Q9Y3A0 265 aa14.37□□□□□ -0.11
VTI1BP1-201ENST00000486325 KIAA0100Q14667 2235 aaKnown RBP14.36□□□□□ -0.11
VTI1BP1-201ENST00000486325 A0A1W2PQJ5 194 aa14.36□□□□□ -0.11
VTI1BP1-201ENST00000486325 AKR1B15C9JRZ8 316 aaPredicted RBP14.36□□□□□ -0.11
VTI1BP1-201ENST00000486325 TULP1O00294 542 aaPredicted RBP14.36□□□□□ -0.11
VTI1BP1-201ENST00000486325 NRDCO43847 1150 aa14.36□□□□□ -0.11
VTI1BP1-201ENST00000486325 GHRP10912 638 aa14.36□□□□□ -0.11
VTI1BP1-201ENST00000486325 TNFSF9P41273 254 aa14.36□□□□□ -0.11
VTI1BP1-201ENST00000486325 GCLMP48507 274 aa14.36□□□□□ -0.11
VTI1BP1-201ENST00000486325 MXI1P50539 228 aa14.36□□□□□ -0.11
VTI1BP1-201ENST00000486325 RAB27AP51159 221 aa14.36□□□□□ -0.11
VTI1BP1-201ENST00000486325 OSTNP61366 133 aa14.36□□□□□ -0.11
VTI1BP1-201ENST00000486325 MYL7Q01449 175 aa14.36□□□□□ -0.11
VTI1BP1-201ENST00000486325 TLE2Q04725 743 aa14.36□□□□□ -0.11
VTI1BP1-201ENST00000486325 PPP3CAQ08209 521 aa14.36□□□□□ -0.11
VTI1BP1-201ENST00000486325 ENOX2Q16206 610 aaKnown RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms