RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 EAF2Q96CJ1 260 aaPredicted RBP5.71□□□□□ -1.5
GCFC2-209ENST00000486016 COQ10AQ96MF6 247 aa5.71□□□□□ -1.5
GCFC2-209ENST00000486016 RIOX1Q9H6W3 641 aa5.71□□□□□ -1.5
GCFC2-209ENST00000486016 CYP4F11Q9HBI6 524 aa5.71□□□□□ -1.5
GCFC2-209ENST00000486016 PNPLA7Q6ZV29 1317 aa5.71□□□□□ -1.5
GCFC2-209ENST00000486016 NEMP1O14524 444 aa5.7□□□□□ -1.5
GCFC2-209ENST00000486016 ENPP3O14638 875 aa5.7□□□□□ -1.5
GCFC2-209ENST00000486016 PDE8AO60658 829 aa5.7□□□□□ -1.5
GCFC2-209ENST00000486016 RAB11FIP3O75154 756 aa5.7□□□□□ -1.5
GCFC2-209ENST00000486016 MGAT1P26572 445 aa5.7□□□□□ -1.5
GCFC2-209ENST00000486016 ID4P47928 161 aa5.7□□□□□ -1.5
GCFC2-209ENST00000486016 FLT3LGP49771 235 aa5.7□□□□□ -1.5
GCFC2-209ENST00000486016 MRPS21P82921 87 aaKnown RBP5.7□□□□□ -1.5
GCFC2-209ENST00000486016 SCAPQ12770 1279 aa5.7□□□□□ -1.5
GCFC2-209ENST00000486016 RNF180Q86T96 592 aa5.7□□□□□ -1.5
GCFC2-209ENST00000486016 RNF169Q8NCN4 708 aa5.7□□□□□ -1.5
GCFC2-209ENST00000486016 CLRN3Q8NCR9 226 aa5.7□□□□□ -1.5
GCFC2-209ENST00000486016 CPEB3Q8NE35 698 aaKnown RBP5.7□□□□□ -1.5
GCFC2-209ENST00000486016 TFAP2CQ92754 450 aa5.7□□□□□ -1.5
GCFC2-209ENST00000486016 ZNHIT2Q9UHR6 403 aa5.7□□□□□ -1.5
GCFC2-209ENST00000486016 RPTORQ8N122 1335 aa5.7□□□□□ -1.5
GCFC2-209ENST00000486016 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.69□□□□□ -1.5
GCFC2-209ENST00000486016 DRGXA6NNA5 263 aa5.69□□□□□ -1.5
GCFC2-209ENST00000486016 KIAA0355O15063 1070 aa5.69□□□□□ -1.5
GCFC2-209ENST00000486016 PJA2O43164 708 aa5.69□□□□□ -1.5
GCFC2-209ENST00000486016 EGR2P11161 476 aaPredicted RBP5.69□□□□□ -1.5
GCFC2-209ENST00000486016 MYCLP1P12525 358 aaPredicted RBP5.69□□□□□ -1.5
GCFC2-209ENST00000486016 SEC24CP53992 1094 aa5.69□□□□□ -1.5
GCFC2-209ENST00000486016 USP14P54578 494 aa5.69□□□□□ -1.5
GCFC2-209ENST00000486016 FAM47AQ5JRC9 791 aa5.69□□□□□ -1.5
GCFC2-209ENST00000486016 AGAP9Q5VTM2 703 aa5.69□□□□□ -1.5
GCFC2-209ENST00000486016 Q6ZVL8 140 aa5.69□□□□□ -1.5
GCFC2-209ENST00000486016 ZNF572Q7Z3I7 529 aaPredicted RBP5.69□□□□□ -1.5
GCFC2-209ENST00000486016 GLCCI1Q86VQ1 547 aa5.69□□□□□ -1.5
GCFC2-209ENST00000486016 TSPEARQ8WU66 669 aa5.69□□□□□ -1.5
GCFC2-209ENST00000486016 ZNF480Q8WV37 535 aa5.69□□□□□ -1.5
GCFC2-209ENST00000486016 PAWRQ96IZ0 340 aaKnown RBP5.69□□□□□ -1.5
GCFC2-209ENST00000486016 SCOCQ9UIL1 159 aa5.69□□□□□ -1.5
GCFC2-209ENST00000486016 EDARQ9UNE0 448 aa5.69□□□□□ -1.5
GCFC2-209ENST00000486016 POLR2AP24928 1970 aaKnown RBP5.68□□□□□ -1.5
GCFC2-209ENST00000486016 UNC119BA6NIH7 251 aa5.68□□□□□ -1.5
GCFC2-209ENST00000486016 ZEB2O60315 1214 aa5.68□□□□□ -1.5
GCFC2-209ENST00000486016 SPDEFO95238 335 aa5.68□□□□□ -1.5
GCFC2-209ENST00000486016 ELANEP08246 267 aa5.68□□□□□ -1.5
GCFC2-209ENST00000486016 ENPP1P22413 925 aa5.68□□□□□ -1.5
GCFC2-209ENST00000486016 DDX6P26196 483 aaKnown RBP eCLIP5.68□□□□□ -1.5
GCFC2-209ENST00000486016 CANXP27824 592 aaKnown RBP5.68□□□□□ -1.5
GCFC2-209ENST00000486016 KRTAP10-9P60411 292 aa5.68□□□□□ -1.5
GCFC2-209ENST00000486016 GUCY1B3Q02153 619 aa5.68□□□□□ -1.5
GCFC2-209ENST00000486016 TP53BP2Q13625 1128 aa5.68□□□□□ -1.5
GCFC2-209ENST00000486016 UGT8Q16880 541 aa5.68□□□□□ -1.5
GCFC2-209ENST00000486016 COLEC12Q5KU26 742 aa5.68□□□□□ -1.5
GCFC2-209ENST00000486016 PDZD4Q76G19 769 aaPredicted RBP5.68□□□□□ -1.5
GCFC2-209ENST00000486016 ADGRG3Q86Y34 549 aa5.68□□□□□ -1.5
GCFC2-209ENST00000486016 TRMT2AQ8IZ69 625 aaKnown RBP5.68□□□□□ -1.5
GCFC2-209ENST00000486016 REPS2Q8NFH8 660 aa5.68□□□□□ -1.5
GCFC2-209ENST00000486016 ASB10Q8WXI3 467 aa5.68□□□□□ -1.5
GCFC2-209ENST00000486016 POGKQ9P215 609 aa5.68□□□□□ -1.5
GCFC2-209ENST00000486016 DPP7Q9UHL4 492 aa5.68□□□□□ -1.5
GCFC2-209ENST00000486016 FPGT-TNNI3KV9GXZ4 949 aa5.68□□□□□ -1.5
GCFC2-209ENST00000486016 COL11A2P13942 1736 aaPredicted RBP5.68□□□□□ -1.5
GCFC2-209ENST00000486016 CXorf49A8MYA2 514 aaPredicted RBP5.67□□□□□ -1.5
GCFC2-209ENST00000486016 CFIP05156 583 aa5.67□□□□□ -1.5
GCFC2-209ENST00000486016 ALOX15P16050 662 aaPredicted RBP5.67□□□□□ -1.5
GCFC2-209ENST00000486016 CHN2P52757 468 aa5.67□□□□□ -1.5
GCFC2-209ENST00000486016 SESN3P58005 492 aa5.67□□□□□ -1.5
GCFC2-209ENST00000486016 CLRN1P58418 232 aa5.67□□□□□ -1.5
GCFC2-209ENST00000486016 KRTAP10-11P60412 298 aa5.67□□□□□ -1.5
GCFC2-209ENST00000486016 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.67□□□□□ -1.5
GCFC2-209ENST00000486016 PRR16Q569H4 304 aa5.67□□□□□ -1.5
GCFC2-209ENST00000486016 THNSL2Q86YJ6 484 aa5.67□□□□□ -1.5
GCFC2-209ENST00000486016 CMTR2Q8IYT2 770 aaKnown RBP5.67□□□□□ -1.5
GCFC2-209ENST00000486016 LCORLQ8N3X6 602 aa5.67□□□□□ -1.5
GCFC2-209ENST00000486016 FAM98AQ8NCA5 519 aaKnown RBP5.67□□□□□ -1.5
GCFC2-209ENST00000486016 ZFP28Q8NHY6 868 aa5.67□□□□□ -1.5
GCFC2-209ENST00000486016 HOXB13Q92826 284 aaPredicted RBP5.67□□□□□ -1.5
GCFC2-209ENST00000486016 FUBP1Q96AE4 644 aaKnown RBP5.67□□□□□ -1.5
GCFC2-209ENST00000486016 ACAP3Q96P50 834 aa5.67□□□□□ -1.5
GCFC2-209ENST00000486016 ORAI2Q96SN7 254 aa5.67□□□□□ -1.5
GCFC2-209ENST00000486016 IFT22Q9H7X7 185 aa5.67□□□□□ -1.5
GCFC2-209ENST00000486016 MAP3K2Q9Y2U5 619 aa5.67□□□□□ -1.5
GCFC2-209ENST00000486016 USP15Q9Y4E8 981 aaPredicted RBP5.67□□□□□ -1.5
GCFC2-209ENST00000486016 PHF2O75151 1096 aa5.66□□□□□ -1.5
GCFC2-209ENST00000486016 RESTQ13127 1097 aa5.66□□□□□ -1.5
GCFC2-209ENST00000486016 ABHD17BQ5VST6 288 aa5.66□□□□□ -1.5
GCFC2-209ENST00000486016 KCNK18Q7Z418 384 aa5.66□□□□□ -1.5
GCFC2-209ENST00000486016 STRA8Q7Z7C7 330 aa5.66□□□□□ -1.5
GCFC2-209ENST00000486016 RHOT2Q8IXI1 618 aa5.66□□□□□ -1.5
GCFC2-209ENST00000486016 CMIPQ8IY22 773 aa5.66□□□□□ -1.5
GCFC2-209ENST00000486016 SUPT20HQ8NEM7 779 aa5.66□□□□□ -1.5
GCFC2-209ENST00000486016 GPR156Q8NFN8 814 aa5.66□□□□□ -1.5
GCFC2-209ENST00000486016 OR7D4Q8NG98 312 aa5.66□□□□□ -1.5
GCFC2-209ENST00000486016 RIN2Q8WYP3 895 aaPredicted RBP5.66□□□□□ -1.5
GCFC2-209ENST00000486016 RAX2Q96IS3 184 aa5.66□□□□□ -1.5
GCFC2-209ENST00000486016 R3HDMLQ9H3Y0 253 aa5.66□□□□□ -1.5
GCFC2-209ENST00000486016 BCO1Q9HAY6 547 aa5.66□□□□□ -1.5
GCFC2-209ENST00000486016 KLHL11Q9NVR0 708 aa5.66□□□□□ -1.5
GCFC2-209ENST00000486016 TBX22Q9Y458 520 aa5.66□□□□□ -1.5
GCFC2-209ENST00000486016 COX11Q9Y6N1 276 aa5.66□□□□□ -1.5
GCFC2-209ENST00000486016 KRTAP29-1A8MX34 341 aaPredicted RBP5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms