RNA–Protein interactions for RNA: ENST00000485938.3

CLN5-202, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 2

Gene CLN5, Length 2,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-202ENST00000485938 KRT27Q7Z3Y8 459 aa24.12■■□□□ 1.45
CLN5-202ENST00000485938 SHC3Q92529 594 aa24.12■■□□□ 1.45
CLN5-202ENST00000485938 UVRAGQ9P2Y5 699 aa24.12■■□□□ 1.45
CLN5-202ENST00000485938 AGAP1Q9UPQ3 857 aa24.12■■□□□ 1.45
CLN5-202ENST00000485938 EPB41L3Q9Y2J2 1087 aaPredicted RBP24.12■■□□□ 1.45
CLN5-202ENST00000485938 CFAP73A6NFT4 308 aa24.11■■□□□ 1.45
CLN5-202ENST00000485938 FSCN2O14926 492 aa24.11■■□□□ 1.45
CLN5-202ENST00000485938 MAPK13O15264 365 aa24.11■■□□□ 1.45
CLN5-202ENST00000485938 DLATP10515 647 aaKnown RBP24.11■■□□□ 1.45
CLN5-202ENST00000485938 FKBP1AP62942 108 aaKnown RBP24.11■■□□□ 1.45
CLN5-202ENST00000485938 SERPINB12Q96P63 405 aa24.11■■□□□ 1.45
CLN5-202ENST00000485938 RIT2Q99578 217 aa24.11■■□□□ 1.45
CLN5-202ENST00000485938 CLDN3O15551 220 aa24.11■■□□□ 1.45
CLN5-202ENST00000485938 RHBDF2Q6PJF5 856 aa24.11■■□□□ 1.45
CLN5-202ENST00000485938 PPM1KQ8N3J5 372 aa24.11■■□□□ 1.45
CLN5-202ENST00000485938 ARHGEF2Q92974 986 aaKnown RBP24.11■■□□□ 1.45
CLN5-202ENST00000485938 CD2APQ9Y5K6 639 aa24.11■■□□□ 1.45
CLN5-202ENST00000485938 DDX39AO00148 427 aaKnown RBP24.1■■□□□ 1.45
CLN5-202ENST00000485938 ACSL3O95573 720 aa24.1■■□□□ 1.45
CLN5-202ENST00000485938 IBSPP21815 317 aaPredicted RBP24.1■■□□□ 1.45
CLN5-202ENST00000485938 KRT17Q04695 432 aa24.1■■□□□ 1.45
CLN5-202ENST00000485938 RIPK1Q13546 671 aa24.1■■□□□ 1.45
CLN5-202ENST00000485938 LRRC14Q15048 493 aa24.1■■□□□ 1.45
CLN5-202ENST00000485938 OTUD6AQ7L8S5 288 aa24.1■■□□□ 1.45
CLN5-202ENST00000485938 C1orf54Q8WWF1 131 aa24.1■■□□□ 1.45
CLN5-202ENST00000485938 RANBP17Q9H2T7 1088 aaKnown RBP24.1■■□□□ 1.45
CLN5-202ENST00000485938 BAIAP2L1Q9UHR4 511 aa24.1■■□□□ 1.45
CLN5-202ENST00000485938 SERPINA10Q9UK55 444 aa24.1■■□□□ 1.45
CLN5-202ENST00000485938 USP15Q9Y4E8 981 aaPredicted RBP24.1■■□□□ 1.45
CLN5-202ENST00000485938 SCN9AQ15858 1988 aa24.1■■□□□ 1.45
CLN5-202ENST00000485938 TMEM120BA0PK00 339 aa24.1■■□□□ 1.45
CLN5-202ENST00000485938 PLS3P13797 630 aa24.1■■□□□ 1.45
CLN5-202ENST00000485938 VSTM1Q6UX27 236 aa24.1■■□□□ 1.45
CLN5-202ENST00000485938 NSMFQ6X4W1 530 aa24.1■■□□□ 1.45
CLN5-202ENST00000485938 ACER1Q8TDN7 264 aa24.1■■□□□ 1.45
CLN5-202ENST00000485938 TCP11Q8WWU5 503 aa24.1■■□□□ 1.45
CLN5-202ENST00000485938 SEMA4DQ92854 862 aa24.1■■□□□ 1.45
CLN5-202ENST00000485938 TDRD3Q9H7E2 651 aaKnown RBP24.1■■□□□ 1.45
CLN5-202ENST00000485938 MRPL11Q9Y3B7 192 aaKnown RBP24.1■■□□□ 1.45
CLN5-202ENST00000485938 UBOX5O94941 541 aa24.09■■□□□ 1.45
CLN5-202ENST00000485938 ADRB2P07550 413 aa24.09■■□□□ 1.45
CLN5-202ENST00000485938 CYP11B1P15538 503 aa24.09■■□□□ 1.45
CLN5-202ENST00000485938 CREB1P16220 341 aa24.09■■□□□ 1.45
CLN5-202ENST00000485938 ALDH1B1P30837 517 aa24.09■■□□□ 1.45
CLN5-202ENST00000485938 MFAP3P55082 362 aa24.09■■□□□ 1.45
CLN5-202ENST00000485938 MKRN4PQ13434 485 aaPredicted RBP24.09■■□□□ 1.45
CLN5-202ENST00000485938 TBC1D1Q86TI0 1168 aaPredicted RBP24.09■■□□□ 1.45
CLN5-202ENST00000485938 MGARPQ8TDB4 240 aa24.09■■□□□ 1.45
CLN5-202ENST00000485938 DYDC1Q8WWB3 177 aa24.09■■□□□ 1.45
CLN5-202ENST00000485938 N4BP2L2Q92802 583 aaPredicted RBP24.09■■□□□ 1.45
CLN5-202ENST00000485938 ATP6V0A4Q9HBG4 840 aa24.09■■□□□ 1.45
CLN5-202ENST00000485938 FGFR1OP2Q9NVK5 253 aa24.09■■□□□ 1.45
CLN5-202ENST00000485938 ZNFX1Q9P2E3 1918 aaKnown RBP24.09■■□□□ 1.45
CLN5-202ENST00000485938 TCP11X1B4DZS4 312 aa24.09■■□□□ 1.45
CLN5-202ENST00000485938 ENTPD3O75355 529 aa24.09■■□□□ 1.45
CLN5-202ENST00000485938 CHKAP35790 457 aa24.09■■□□□ 1.45
CLN5-202ENST00000485938 CDR2Q01850 454 aa24.09■■□□□ 1.45
CLN5-202ENST00000485938 MAP2K1Q02750 393 aaPredicted RBP24.09■■□□□ 1.45
CLN5-202ENST00000485938 LLGL1Q15334 1064 aa24.09■■□□□ 1.45
CLN5-202ENST00000485938 SGO2Q562F6 1265 aa24.09■■□□□ 1.45
CLN5-202ENST00000485938 MIER3Q7Z3K6 550 aa24.09■■□□□ 1.45
CLN5-202ENST00000485938 MXRA8Q9BRK3 442 aa24.09■■□□□ 1.45
CLN5-202ENST00000485938 CLTAP09496 248 aa24.08■■□□□ 1.45
CLN5-202ENST00000485938 ITIH2P19823 946 aa24.08■■□□□ 1.45
CLN5-202ENST00000485938 MCCD1P59942 119 aaPredicted RBP24.08■■□□□ 1.45
CLN5-202ENST00000485938 HAUS6Q7Z4H7 955 aa24.08■■□□□ 1.45
CLN5-202ENST00000485938 CSRNP1Q96S65 589 aa24.08■■□□□ 1.45
CLN5-202ENST00000485938 ARHGEF10LQ9HCE6 1279 aa24.08■■□□□ 1.45
CLN5-202ENST00000485938 ITGB5P18084 799 aa24.07■■□□□ 1.44
CLN5-202ENST00000485938 IVDP26440 423 aa24.07■■□□□ 1.44
CLN5-202ENST00000485938 NCALDP61601 193 aa24.07■■□□□ 1.44
CLN5-202ENST00000485938 GTF2BQ00403 316 aa24.07■■□□□ 1.44
CLN5-202ENST00000485938 GALNTL6Q49A17 601 aa24.07■■□□□ 1.44
CLN5-202ENST00000485938 CRELD2Q6UXH1 353 aaPredicted RBP24.07■■□□□ 1.44
CLN5-202ENST00000485938 TMX4Q9H1E5 349 aaPredicted RBP24.07■■□□□ 1.44
CLN5-202ENST00000485938 ASIC3Q9UHC3 531 aa24.07■■□□□ 1.44
CLN5-202ENST00000485938 TMX2Q9Y320 296 aa24.07■■□□□ 1.44
CLN5-202ENST00000485938 P4HBP07237 508 aaKnown RBP24.07■■□□□ 1.44
CLN5-202ENST00000485938 RARRES1P49788 294 aa24.07■■□□□ 1.44
CLN5-202ENST00000485938 SNX1Q13596 522 aa24.07■■□□□ 1.44
CLN5-202ENST00000485938 TLDC1Q6P9B6 456 aa24.07■■□□□ 1.44
CLN5-202ENST00000485938 PNMA8AQ86V59 439 aaPredicted RBP24.07■■□□□ 1.44
CLN5-202ENST00000485938 HELQQ8TDG4 1101 aa24.07■■□□□ 1.44
CLN5-202ENST00000485938 ZHX2Q9Y6X8 837 aa24.07■■□□□ 1.44
CLN5-202ENST00000485938 ZNF646O15015 1829 aaPredicted RBP24.07■■□□□ 1.44
CLN5-202ENST00000485938 GOLGA8IPA6NC78 632 aa24.06■■□□□ 1.44
CLN5-202ENST00000485938 GOLGA8JA6NMD2 632 aa24.06■■□□□ 1.44
CLN5-202ENST00000485938 TTC4O95801 387 aa24.06■■□□□ 1.44
CLN5-202ENST00000485938 ATP5DP30049 168 aa24.06■■□□□ 1.44
CLN5-202ENST00000485938 DDX1Q92499 740 aaKnown RBP24.06■■□□□ 1.44
CLN5-202ENST00000485938 SNF8Q96H20 258 aa24.06■■□□□ 1.44
CLN5-202ENST00000485938 PLVAPQ9BX97 442 aa24.06■■□□□ 1.44
CLN5-202ENST00000485938 ST6GALNAC4Q9H4F1 302 aa24.06■■□□□ 1.44
CLN5-202ENST00000485938 CHST7Q9NS84 486 aa24.06■■□□□ 1.44
CLN5-202ENST00000485938 PKD2L1Q9P0L9 805 aa24.06■■□□□ 1.44
CLN5-202ENST00000485938 CTNNAL1Q9UBT7 734 aa24.06■■□□□ 1.44
CLN5-202ENST00000485938 TULP1O00294 542 aaPredicted RBP24.06■■□□□ 1.44
CLN5-202ENST00000485938 GRIN3BO60391 1043 aa24.06■■□□□ 1.44
CLN5-202ENST00000485938 SNRPFP62306 86 aaKnown RBP24.06■■□□□ 1.44
CLN5-202ENST00000485938 PTK6Q13882 451 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms