RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 MSTO1Q9BUK6 570 aa12.99□□□□□ -0.33
APTX-227ENST00000485479 ELAC1Q9H777 363 aaKnown RBP12.99□□□□□ -0.33
APTX-227ENST00000485479 DNAJB4Q9UDY4 337 aa12.99□□□□□ -0.33
APTX-227ENST00000485479 PCDHB13Q9Y5F0 798 aa12.99□□□□□ -0.33
APTX-227ENST00000485479 TDRD15B5MCY1 1934 aaKnown RBP12.99□□□□□ -0.33
APTX-227ENST00000485479 ZC3H11AO75152 810 aaKnown RBP eCLIP12.98□□□□□ -0.33
APTX-227ENST00000485479 RHOBTB3O94955 611 aa12.98□□□□□ -0.33
APTX-227ENST00000485479 EOMESO95936 686 aa12.98□□□□□ -0.33
APTX-227ENST00000485479 MCM4P33991 863 aa12.98□□□□□ -0.33
APTX-227ENST00000485479 KANK3Q6NY19 840 aa12.98□□□□□ -0.33
APTX-227ENST00000485479 ZPBP2Q6X784 338 aa12.98□□□□□ -0.33
APTX-227ENST00000485479 GSTCDQ8NEC7 633 aa12.98□□□□□ -0.33
APTX-227ENST00000485479 FAM212AQ96EL1 285 aa12.98□□□□□ -0.33
APTX-227ENST00000485479 CCDC51Q96ER9 411 aa12.98□□□□□ -0.33
APTX-227ENST00000485479 ZNF576Q9H609 170 aa12.98□□□□□ -0.33
APTX-227ENST00000485479 GOLGA2P5Q9HBQ8 144 aa12.98□□□□□ -0.33
APTX-227ENST00000485479 TBC1D13Q9NVG8 400 aa12.98□□□□□ -0.33
APTX-227ENST00000485479 MAN1B1Q9UKM7 699 aa12.98□□□□□ -0.33
APTX-227ENST00000485479 CITO14578 2027 aa12.98□□□□□ -0.33
APTX-227ENST00000485479 UNC80Q8N2C7 3258 aa12.98□□□□□ -0.33
APTX-227ENST00000485479 TGFB1I1O43294 461 aa12.98□□□□□ -0.33
APTX-227ENST00000485479 FAM189A1O60320 539 aa12.98□□□□□ -0.33
APTX-227ENST00000485479 MYL1P05976 194 aa12.98□□□□□ -0.33
APTX-227ENST00000485479 BMP6P22004 513 aa12.98□□□□□ -0.33
APTX-227ENST00000485479 WNT7BP56706 349 aa12.98□□□□□ -0.33
APTX-227ENST00000485479 MCL1Q07820 350 aa12.98□□□□□ -0.33
APTX-227ENST00000485479 GRIN2CQ14957 1233 aa12.98□□□□□ -0.33
APTX-227ENST00000485479 RAB30Q15771 203 aa12.98□□□□□ -0.33
APTX-227ENST00000485479 DCAF4L1Q3SXM0 396 aa12.98□□□□□ -0.33
APTX-227ENST00000485479 GLB1LQ6UWU2 654 aa12.98□□□□□ -0.33
APTX-227ENST00000485479 MRPL10Q7Z7H8 261 aaKnown RBP12.98□□□□□ -0.33
APTX-227ENST00000485479 TMEM173Q86WV6 379 aaPredicted RBP12.98□□□□□ -0.33
APTX-227ENST00000485479 FIBCD1Q8N539 461 aa12.98□□□□□ -0.33
APTX-227ENST00000485479 GDPD5Q8WTR4 605 aa12.98□□□□□ -0.33
APTX-227ENST00000485479 TMEM117Q9H0C3 514 aa12.98□□□□□ -0.33
APTX-227ENST00000485479 A0A0B4J269 797 aa12.97□□□□□ -0.33
APTX-227ENST00000485479 PTGESO14684 152 aa12.97□□□□□ -0.33
APTX-227ENST00000485479 DDHD2O94830 711 aa12.97□□□□□ -0.33
APTX-227ENST00000485479 PIGRP01833 764 aa12.97□□□□□ -0.33
APTX-227ENST00000485479 IGFBP6P24592 240 aaPredicted RBP12.97□□□□□ -0.33
APTX-227ENST00000485479 CYP2J2P51589 502 aa12.97□□□□□ -0.33
APTX-227ENST00000485479 RNASELQ05823 741 aaKnown RBP12.97□□□□□ -0.33
APTX-227ENST00000485479 NOMO2Q5JPE7 1267 aa12.97□□□□□ -0.33
APTX-227ENST00000485479 ARMCX5Q6P1M9 558 aa12.97□□□□□ -0.33
APTX-227ENST00000485479 RDH13Q8NBN7 331 aa12.97□□□□□ -0.33
APTX-227ENST00000485479 SP7Q8TDD2 431 aaPredicted RBP12.97□□□□□ -0.33
APTX-227ENST00000485479 PGBD4Q96DM1 585 aa12.97□□□□□ -0.33
APTX-227ENST00000485479 ZMAT2Q96NC0 199 aaKnown RBP12.97□□□□□ -0.33
APTX-227ENST00000485479 PAAF1Q9BRP4 392 aa12.97□□□□□ -0.33
APTX-227ENST00000485479 FAM213AQ9BRX8 229 aa12.97□□□□□ -0.33
APTX-227ENST00000485479 PRDM12Q9H4Q4 367 aa12.97□□□□□ -0.33
APTX-227ENST00000485479 CWH43Q9H720 699 aa12.97□□□□□ -0.33
APTX-227ENST00000485479 KCNG1Q9UIX4 513 aa12.97□□□□□ -0.33
APTX-227ENST00000485479 COL4A4P53420 1690 aaPredicted RBP12.97□□□□□ -0.33
APTX-227ENST00000485479 EIF3DO15371 548 aaKnown RBP eCLIP12.96□□□□□ -0.33
APTX-227ENST00000485479 MCF2P10911 925 aa12.96□□□□□ -0.33
APTX-227ENST00000485479 SKIP12755 728 aa12.96□□□□□ -0.33
APTX-227ENST00000485479 CD44P16070 742 aaKnown RBP12.96□□□□□ -0.33
APTX-227ENST00000485479 CTNNB1P35222 781 aa12.96□□□□□ -0.33
APTX-227ENST00000485479 PRCPP42785 496 aa12.96□□□□□ -0.33
APTX-227ENST00000485479 ZNF697Q5TEC3 545 aa12.96□□□□□ -0.33
APTX-227ENST00000485479 LRRC43Q8N309 656 aa12.96□□□□□ -0.33
APTX-227ENST00000485479 SLC17A8Q8NDX2 589 aa12.96□□□□□ -0.33
APTX-227ENST00000485479 SPATA20Q8TB22 786 aa12.96□□□□□ -0.33
APTX-227ENST00000485479 ZNF507Q8TCN5 953 aa12.96□□□□□ -0.33
APTX-227ENST00000485479 CCDC34Q96HJ3 373 aa12.96□□□□□ -0.33
APTX-227ENST00000485479 CLSTN2Q9H4D0 955 aa12.96□□□□□ -0.33
APTX-227ENST00000485479 AGO2Q9UKV8 859 aaKnown RBP12.96□□□□□ -0.33
APTX-227ENST00000485479 VCANP13611 3396 aa12.96□□□□□ -0.34
APTX-227ENST00000485479 C5orf42Q9H799 3197 aa12.96□□□□□ -0.34
APTX-227ENST00000485479 TRIM49BA6NDI0 452 aa12.96□□□□□ -0.34
APTX-227ENST00000485479 CASTOR2A6NHX0 329 aa12.96□□□□□ -0.34
APTX-227ENST00000485479 GRM5P41594 1212 aa12.96□□□□□ -0.34
APTX-227ENST00000485479 GUCY2FP51841 1108 aa12.96□□□□□ -0.34
APTX-227ENST00000485479 KCNB1Q14721 858 aa12.96□□□□□ -0.34
APTX-227ENST00000485479 ENOX2Q16206 610 aaKnown RBP12.96□□□□□ -0.34
APTX-227ENST00000485479 KNOP1Q1ED39 458 aaKnown RBP12.96□□□□□ -0.34
APTX-227ENST00000485479 SLC10A6Q3KNW5 377 aa12.96□□□□□ -0.34
APTX-227ENST00000485479 EPC2Q52LR7 807 aa12.96□□□□□ -0.34
APTX-227ENST00000485479 KLHL10Q6JEL2 608 aa12.96□□□□□ -0.34
APTX-227ENST00000485479 CRELD2Q6UXH1 353 aaPredicted RBP12.96□□□□□ -0.34
APTX-227ENST00000485479 STXBP4Q6ZWJ1 553 aa12.96□□□□□ -0.34
APTX-227ENST00000485479 CMTR2Q8IYT2 770 aaKnown RBP12.96□□□□□ -0.34
APTX-227ENST00000485479 DEFB123Q8N688 67 aa12.96□□□□□ -0.34
APTX-227ENST00000485479 HASPINQ8TF76 798 aa12.96□□□□□ -0.34
APTX-227ENST00000485479 HVCN1Q96D96 273 aa12.96□□□□□ -0.34
APTX-227ENST00000485479 ACAP3Q96P50 834 aa12.96□□□□□ -0.34
APTX-227ENST00000485479 RPS6KC1Q96S38 1066 aa12.96□□□□□ -0.34
APTX-227ENST00000485479 CCDC94Q9BW85 323 aaPredicted RBP12.96□□□□□ -0.34
APTX-227ENST00000485479 NUP62CLQ9H1M0 184 aa12.96□□□□□ -0.34
APTX-227ENST00000485479 NRDE2Q9H7Z3 1164 aa12.96□□□□□ -0.34
APTX-227ENST00000485479 ALG13Q9NP73 1137 aaKnown RBP12.96□□□□□ -0.34
APTX-227ENST00000485479 AGPAT3Q9NRZ7 376 aa12.96□□□□□ -0.34
APTX-227ENST00000485479 EXOC7Q9UPT5 735 aa12.96□□□□□ -0.34
APTX-227ENST00000485479 PLXNA4Q9HCM2 1894 aa12.95□□□□□ -0.34
APTX-227ENST00000485479 OGTO15294 1046 aa12.95□□□□□ -0.34
APTX-227ENST00000485479 SMC2O95347 1197 aa12.95□□□□□ -0.34
APTX-227ENST00000485479 ANK1P16157 1881 aa12.95□□□□□ -0.34
APTX-227ENST00000485479 PMS1P54277 932 aaKnown RBP12.95□□□□□ -0.34
APTX-227ENST00000485479 ALCAMQ13740 583 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms